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Theano nosetests results on aws cg1.4xlarge nvidia M2050. floatX=float32, device=GPU
root@master:~/Theano# git rev-list HEAD | head -1
c6fc9734f1602bbbb9335bd61e49872b1635b3de
root@master:~/Theano# THEANO_FLAGS='device=gpu,floatX=float32,force_device=True' nosetests
Using gpu device 0: Tesla M2050
...................................E...........E..EEE...........................E....E..................................FF...................................................................E...........................................................SS..E..F................................................................................................................................../usr/lib/python2.7/dist-packages/scipy/signal/signaltools.py:408: ComplexWarning: Casting complex values to real discards the imaginary part
return sigtools._convolve2d(in1,in2,1,val,bval,fillvalue)
.......................................EEEEEEEEEEE...........................EE.F...........................E..................................WARNING: unused streams above 512 (Tune GPU_mrg get_n_streams)
...WARNING (theano.gof.cmodule): Cache leak due to unpickle-able key data set([(((3, (3,), (3,), (3,), (3,), (3,)), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1')), ('CLinker.cmodule_key', ('-O3', '-Wno-write-strings', '-Wno-unused-label', '-Wno-unused-variable', '-fno-math-errno'), (), 'md5:19e61d28e295743d24d12b52c2a74fbb', (<theano.scalar.basic.Composite object at 0x10a4e490>, ((Scalar(float64), ((-1, 0), False)), (Scalar(float64), ((-1, 1), False)), (Scalar(float64), ((-1, 2), False))), (False, False, False))))])
.WARNING (theano.gof.cmodule): Cache leak due to unpickle-able key data set([(((3, (3,), (3,), (3,)), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1')), ('CLinker.cmodule_key', ('-O3', '-Wno-write-strings', '-Wno-unused-label', '-Wno-unused-variable', '-fno-math-errno'), (), 'md5:19e61d28e295743d24d12b52c2a74fbb', (<theano.scalar.basic.Composite object at 0x10a5f0d0>, ((Scalar(float64), ((-1, 0), False)), (Scalar(float64), ((-1, 1), False))), (False,))))])
.WARNING (theano.gof.cmodule): Cache leak due to unpickle-able key data set([(((3, (3,), (3,), (3,)), (10, '1.5.1'), (10, '1.5.1'), (10, '1.5.1')), ('CLinker.cmodule_key', ('-O3', '-Wno-write-strings', '-Wno-unused-label', '-Wno-unused-variable', '-fno-math-errno'), (), 'md5:19e61d28e295743d24d12b52c2a74fbb', (<theano.scalar.basic.Composite object at 0x1291a5d0>, ((Scalar(float64), ((-1, 0), False)), (Scalar(float64), ((-1, 1), False))), (False,))))])
.............E........../root/Theano/theano/sandbox/rng_mrg.py:736: UserWarning: MRG_RandomStreams Can't determine #streams from size (Shape.0), guessing 30*256
nstreams = self.n_streams(size)
WARNING: unused streams above 60 (Tune GPU_mrg get_n_streams)
......EEERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,grad_of_scan_fn}.2, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,grad_of_scan_fn}.2, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,grad_of_scan_fn}.2, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,grad_of_scan_fn}.2, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
ERROR (theano.gof.opt): Optimization failure due to: gpuScanOptimization
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 949, in process_node
env.replace_all_validate(repl_pairs, reason=lopt)
File "/root/Theano/theano/gof/toolbox.py", line 108, in replace_all_validate
env.replace(r, new_r, reason=reason)
File "/root/Theano/theano/gof/env.py", line 399, in replace
raise TypeError("The type of the replacement must be the same as the type of the original Variable.", r, new_r, r.type, new_r.type, str(reason))
TypeError: ('The type of the replacement must be the same as the type of the original Variable.', for{cpu,scan_fn}.1, HostFromGpu.0, TensorType(int32, vector), TensorType(float32, vector), 'gpuScanOptimization')
.EE..E..E.............FE.E.......ERROR (theano.gof.opt): EquilibriumOptimizer max'ed out by 'cut_gpu_constant_transfers'. You can safely raise the current threshold of 20.000000 with the theano flag 'optdb.max_use_ratio'.
E............EEEE....E.E......WARNING: skipping gradient test because verify_grad doesn't support sparse arguments
.WARNING: skipping gradient test because verify_grad doesn't support sparse arguments
..............F............/usr/lib/python2.7/dist-packages/scipy/sparse/compressed.py:486: SparseEfficiencyWarning: changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
SparseEfficiencyWarning)
............/usr/lib/python2.7/dist-packages/scipy/sparse/compressed.py:486: SparseEfficiencyWarning: changing the sparsity structure of a csc_matrix is expensive. lil_matrix is more efficient.
SparseEfficiencyWarning)
....................EEEEEE.....FFFFFFF..........................SFSS.....F......FFF........F..F.......F..............ERROR (theano.gof.opt): Optimization failure due to: local_gpualloc
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 1057, in local_gpualloc
new_out = host_from_gpu(gpu_alloc(val2, *shp))
File "/root/Theano/theano/gof/op.py", line 377, in __call__
node = self.make_node(*inputs, **kwargs)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1910, in make_node
raise TypeError('GpuAlloc requires value of same dimensions as shape', value, len(shape))
TypeError: ('GpuAlloc requires value of same dimensions as shape', DimShuffle{0,1,2}.0, 2)
ERROR (theano.gof.opt): Optimization failure due to: local_gpualloc
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 1057, in local_gpualloc
new_out = host_from_gpu(gpu_alloc(val2, *shp))
File "/root/Theano/theano/gof/op.py", line 377, in __call__
node = self.make_node(*inputs, **kwargs)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1910, in make_node
raise TypeError('GpuAlloc requires value of same dimensions as shape', value, len(shape))
TypeError: ('GpuAlloc requires value of same dimensions as shape', DimShuffle{0,1,2}.0, 2)
ERROR (theano.gof.opt): Optimization failure due to: local_gpualloc
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 1057, in local_gpualloc
new_out = host_from_gpu(gpu_alloc(val2, *shp))
File "/root/Theano/theano/gof/op.py", line 377, in __call__
node = self.make_node(*inputs, **kwargs)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1910, in make_node
raise TypeError('GpuAlloc requires value of same dimensions as shape', value, len(shape))
TypeError: ('GpuAlloc requires value of same dimensions as shape', DimShuffle{0,1,2}.0, 2)
ERROR (theano.gof.opt): Optimization failure due to: local_gpualloc
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 1057, in local_gpualloc
new_out = host_from_gpu(gpu_alloc(val2, *shp))
File "/root/Theano/theano/gof/op.py", line 377, in __call__
node = self.make_node(*inputs, **kwargs)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1910, in make_node
raise TypeError('GpuAlloc requires value of same dimensions as shape', value, len(shape))
TypeError: ('GpuAlloc requires value of same dimensions as shape', DimShuffle{0,1,2}.0, 2)
.....F..........F...ERROR (theano.gof.opt): Optimization failure due to: local_gpu_elemwise_0
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 166, in local_gpu_elemwise_0
upcasted = node.op.make_node(*[tensor.cast(i, 'float32') for i in node.inputs])
File "/root/Theano/theano/tensor/elemwise.py", line 469, in make_node
shadow = self.scalar_op.make_node(*[Scalar(dtype=i.type.dtype)() for i in inputs])
File "/root/Theano/theano/scalar/basic.py", line 694, in make_node
outputs = [t() for t in self.output_types([input.type for input in inputs])]
File "/root/Theano/theano/scalar/basic.py", line 2314, in output_types
% (self.inputs_type, tuple(input_types)))
TypeError: Wrong types for Composite. Expected (Scalar(float32), Scalar(int8)), got (Scalar(float32), Scalar(float32)).
E...........F.......F.......E...F.......F.......F.......F.......E...E...F.......F.......F.......F.......F.......F.......F.......F.......F...........F.......F.......In file included from /usr/include/python2.7/Python.h:8,
from mod.cu:1:
/usr/include/python2.7/pyconfig.h:1158: warning: "_POSIX_C_SOURCE" redefined
/usr/include/features.h:163: note: this is the location of the previous definition
/usr/include/python2.7/pyconfig.h:1180: warning: "_XOPEN_SOURCE" redefined
/usr/include/features.h:165: note: this is the location of the previous definition
mod.cu(205): error: identifier "callkernel_node_0" is undefined
1 error detected in the compilation of "/tmp/tmpxft_00003640_00000000-4_mod.cpp1.ii".
===============================
1 #include <Python.h>
2 #include <iostream>
3 #include <numpy/arrayobject.h>
4 #include "cuda_ndarray.cuh"
5 //////////////////////
6 //// Support Code
7 //////////////////////
8
9
10 struct __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6 {
11 PyObject* __ERROR;
12
13 PyObject* storage_V3;
14 PyObject* storage_V1;
15
16 PyObject* py_V1;
17 CudaNdarray * V1;
18
19 __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6() {}
20 ~__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6(void) {
21 cleanup();
22 }
23
24 int init(PyObject* __ERROR, PyObject* storage_V3, PyObject* storage_V1) {
25 Py_XINCREF(storage_V3);
26 Py_XINCREF(storage_V1);
27 this->storage_V3 = storage_V3;
28 this->storage_V1 = storage_V1;
29 int __failure = 0;
30
31 {
32
33 py_V1 = Py_None;
34 {Py_XINCREF(py_V1);}
35 V1 = NULL;
36 {
37
38 this->__ERROR = __ERROR;
39 return 0;
40 __label_3:
41
42 double __DUMMY_3;
43
44 }
45 __label_1:
46
47 //std::cerr << "cleanup " << py_V1 << " " << V1 << "\n";
48 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V1, (py_V1->ob_refcnt));
49 if (V1)
50 {
51 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V1, (V1->ob_refcnt));
52 Py_XDECREF(V1);
53 }
54 //std::cerr << "cleanup done" << py_V1 << "\n";
55
56 {Py_XDECREF(py_V1);}
57
58 double __DUMMY_1;
59
60 }
61
62 Py_XDECREF(this->storage_V3);
63 Py_XDECREF(this->storage_V1);
64
65 if (__failure) {
66 // When there is a failure, this code puts the exception
67 // in __ERROR.
68 PyObject* err_type = NULL;
69 PyObject* err_msg = NULL;
70 PyObject* err_traceback = NULL;
71 PyErr_Fetch(&err_type, &err_msg, &err_traceback);
72 if (!err_type) {err_type = Py_None;Py_INCREF(Py_None);}
73 if (!err_msg) {err_msg = Py_None; Py_INCREF(Py_None);}
74 if (!err_traceback) {err_traceback = Py_None; Py_INCREF(Py_None);}
75 PyObject* old_err_type = PyList_GET_ITEM(__ERROR, 0);
76 PyObject* old_err_msg = PyList_GET_ITEM(__ERROR, 1);
77 PyObject* old_err_traceback = PyList_GET_ITEM(__ERROR, 2);
78 PyList_SET_ITEM(__ERROR, 0, err_type);
79 PyList_SET_ITEM(__ERROR, 1, err_msg);
80 PyList_SET_ITEM(__ERROR, 2, err_traceback);
81 {Py_XDECREF(old_err_type);}
82 {Py_XDECREF(old_err_msg);}
83 {Py_XDECREF(old_err_traceback);}
84 }
85 // The failure code is returned to index what code block failed.
86 return __failure;
87
88 }
89 void cleanup(void) {
90 __label_1:
91
92 //std::cerr << "cleanup " << py_V1 << " " << V1 << "\n";
93 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V1, (py_V1->ob_refcnt));
94 if (V1)
95 {
96 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V1, (V1->ob_refcnt));
97 Py_XDECREF(V1);
98 }
99 //std::cerr << "cleanup done" << py_V1 << "\n";
100
101 {Py_XDECREF(py_V1);}
102
103 double __DUMMY_1;
104 __label_3:
105
106 double __DUMMY_3;
107
108 Py_XDECREF(this->storage_V3);
109 Py_XDECREF(this->storage_V1);
110 }
111 int run(void) {
112 int __failure = 0;
113
114 PyObject* py_V3;
115 CudaNdarray * V3;
116 {
117
118 {
119
120 py_V3 = PyList_GET_ITEM(storage_V3, 0);
121 {Py_XINCREF(py_V3);}
122
123 assert(py_V3->ob_refcnt >= 2); // There should be at least one ref from the container object,
124 // and one ref from the local scope.
125
126 if (CudaNdarray_Check(py_V3))
127 {
128 //fprintf(stderr, "c_extract CNDA object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
129 V3 = (CudaNdarray*)py_V3;
130 //std::cerr << "c_extract " << V3 << '\n';
131 if (V3->nd != 1)
132 {
133 PyErr_Format(PyExc_RuntimeError, "Some CudaNdarray has rank %i, it was supposed to have rank 1", V3->nd);
134 V3 = NULL;
135 {__failure = 4; goto __label_4;};
136 }
137 //std::cerr << "c_extract " << V3 << " nd check passed\n";
138
139
140 assert(V3);
141 Py_INCREF(py_V3);
142 }
143 else
144 {
145 //fprintf(stderr, "FAILING c_extract CNDA object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
146 PyErr_SetString(PyExc_TypeError, "Argument not a CudaNdarray");
147 V3 = NULL;
148 {__failure = 4; goto __label_4;};
149 }
150 //std::cerr << "c_extract done " << V3 << '\n';
151
152
153 {
154
155 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} START\n";
156 //standard elemwise size checks
157
158
159 int dims[1] = {1};
160
161
162 int broadcasts_V3[1] = {0};
163
164
165 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} checking input V3\n";
166 if (1 != V3->nd)
167 {
168 PyErr_Format(PyExc_TypeError, "need 1 dims, not %i", V3->nd);
169 {__failure = 5; goto __label_5;};
170 }
171 for (int i = 0; i< 1; ++i)
172 {
173 dims[i] = (dims[i] == 1) ? CudaNdarray_HOST_DIMS(V3)[i] : dims[i];
174 if ((!(broadcasts_V3[i] && CudaNdarray_HOST_DIMS(V3)[i] == 1))&& (dims[i] != CudaNdarray_HOST_DIMS(V3)[i]))
175 {
176 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} checking input V3 failed\n";
177 PyErr_Format(PyExc_ValueError, "GpuElemwise. Input dimension mis-match. One of your inputs has shape[%i] == %i, but the output's size on that axis is %i.",
178 i,
179 CudaNdarray_HOST_DIMS(V3)[i],
180 dims[i]
181 );
182 {__failure = 5; goto __label_5;};
183 }
184 }
185
186
187 Py_XDECREF(V1);
188 V1 = V3;
189 Py_INCREF(V1);
190 for (int i = 0; (i< 1) && (V1); ++i) {
191 if (dims[i] != CudaNdarray_HOST_DIMS(V1)[i])
192 {
193 Py_DECREF(V1);
194 V1 = NULL;
195 {__failure = 5; goto __label_5;};
196 }
197 }
198 //std::cerr << "ELEMWISE NEW V1 nd" << V1->nd << "\n";
199 //std::cerr << "ELEMWISE NEW V1 data" << V1->devdata << "\n";
200
201
202 {
203 //new block so that failure gotos don't skip over variable initialization
204 //std::cerr << "calling callkernel\n";
205 if (callkernel_node_0(1, 0, dims
206
207
208 , CudaNdarray_DEV_DATA(V3), CudaNdarray_HOST_STRIDES(V3)
209
210
211 , CudaNdarray_DEV_DATA(V1), CudaNdarray_HOST_STRIDES(V1)
212
213
214 ))
215 {
216 // error
217
218
219 Py_DECREF(V1);
220 V1 = NULL;
221
222
223 {__failure = 5; goto __label_5;};
224 }
225 else // no error
226 {
227 }
228 }
229 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} END\n";
230
231 __label_5:
232
233 double __DUMMY_5;
234
235 }
236 __label_4:
237
238 //std::cerr << "cleanup " << py_V3 << " " << V3 << "\n";
239 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
240 if (V3)
241 {
242 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V3, (V3->ob_refcnt));
243 Py_XDECREF(V3);
244 }
245 //std::cerr << "cleanup done" << py_V3 << "\n";
246
247 {Py_XDECREF(py_V3);}
248
249 double __DUMMY_4;
250
251 }
252 __label_2:
253
254 if (!__failure) {
255
256 //std::cerr << "sync\n";
257 if (NULL == V1) {
258 // failure: sync None to storage
259 Py_XDECREF(py_V1);
260 py_V1 = Py_None;
261 Py_INCREF(py_V1);
262 }
263 else
264 {
265 if (py_V1 != (PyObject*)V1)
266 {
267 Py_XDECREF(py_V1);
268 py_V1 = (PyObject*)V1;
269 Py_INCREF(py_V1);
270 }
271 assert(py_V1->ob_refcnt);
272 }
273
274 PyObject* old = PyList_GET_ITEM(storage_V1, 0);
275 {Py_XINCREF(py_V1);}
276 PyList_SET_ITEM(storage_V1, 0, py_V1);
277 {Py_XDECREF(old);}
278 }
279
280 double __DUMMY_2;
281
282 }
283
284
285 if (__failure) {
286 // When there is a failure, this code puts the exception
287 // in __ERROR.
288 PyObject* err_type = NULL;
289 PyObject* err_msg = NULL;
290 PyObject* err_traceback = NULL;
291 PyErr_Fetch(&err_type, &err_msg, &err_traceback);
292 if (!err_type) {err_type = Py_None;Py_INCREF(Py_None);}
293 if (!err_msg) {err_msg = Py_None; Py_INCREF(Py_None);}
294 if (!err_traceback) {err_traceback = Py_None; Py_INCREF(Py_None);}
295 PyObject* old_err_type = PyList_GET_ITEM(__ERROR, 0);
296 PyObject* old_err_msg = PyList_GET_ITEM(__ERROR, 1);
297 PyObject* old_err_traceback = PyList_GET_ITEM(__ERROR, 2);
298 PyList_SET_ITEM(__ERROR, 0, err_type);
299 PyList_SET_ITEM(__ERROR, 1, err_msg);
300 PyList_SET_ITEM(__ERROR, 2, err_traceback);
301 {Py_XDECREF(old_err_type);}
302 {Py_XDECREF(old_err_msg);}
303 {Py_XDECREF(old_err_traceback);}
304 }
305 // The failure code is returned to index what code block failed.
306 return __failure;
307
308 }
309 };
310
311
312 int __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_executor(__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6* self) {
313 return self->run();
314 }
315
316 void __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_destructor(void* executor, void* self) {
317 //printf("doing cleanup\n");
318 //fflush(stdout);
319 // ((__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6*)self)->cleanup();
320 // free(self);
321 delete ((__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6*)self);
322 //printf("done cleanup\n");
323 //fflush(stdout);
324 }
325
326 //////////////////////
327 //// Functions
328 //////////////////////
329 static PyObject * instantiate(PyObject * self, PyObject *argtuple) {
330 assert(PyTuple_Check(argtuple));
331 if (3 != PyTuple_Size(argtuple)){
332 PyErr_Format(PyExc_TypeError, "Wrong number of arguments, expected 3, got %i", (int)PyTuple_Size(argtuple));
333 return NULL;
334 }
335 __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6* struct_ptr = new __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6();
336 struct_ptr->init( PyTuple_GET_ITEM(argtuple, 0),PyTuple_GET_ITEM(argtuple, 1),PyTuple_GET_ITEM(argtuple, 2) );
337 PyObject* thunk = PyCObject_FromVoidPtrAndDesc((void*)(&__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_executor), struct_ptr, __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_destructor);
338 return thunk; }
339
340 //////////////////////
341 //// Module init
342 //////////////////////
343 static PyMethodDef MyMethods[] = {
344 {"instantiate", instantiate, METH_VARARGS, "undocumented"} ,
345 {NULL, NULL, 0, NULL}
346 };
347 PyMODINIT_FUNC initb00d036aee58056c0a5d347463f1a2e6(void){
348 import_array();
349 (void) Py_InitModule("b00d036aee58056c0a5d347463f1a2e6", MyMethods);
350 }
351
E...In file included from /usr/include/python2.7/Python.h:8,
from mod.cu:1:
/usr/include/python2.7/pyconfig.h:1158: warning: "_POSIX_C_SOURCE" redefined
/usr/include/features.h:163: note: this is the location of the previous definition
/usr/include/python2.7/pyconfig.h:1180: warning: "_XOPEN_SOURCE" redefined
/usr/include/features.h:165: note: this is the location of the previous definition
mod.cu(205): error: identifier "callkernel_node_0" is undefined
1 error detected in the compilation of "/tmp/tmpxft_0000364a_00000000-4_mod.cpp1.ii".
===============================
1 #include <Python.h>
2 #include <iostream>
3 #include <numpy/arrayobject.h>
4 #include "cuda_ndarray.cuh"
5 //////////////////////
6 //// Support Code
7 //////////////////////
8
9
10 struct __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6 {
11 PyObject* __ERROR;
12
13 PyObject* storage_V3;
14 PyObject* storage_V1;
15
16 PyObject* py_V1;
17 CudaNdarray * V1;
18
19 __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6() {}
20 ~__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6(void) {
21 cleanup();
22 }
23
24 int init(PyObject* __ERROR, PyObject* storage_V3, PyObject* storage_V1) {
25 Py_XINCREF(storage_V3);
26 Py_XINCREF(storage_V1);
27 this->storage_V3 = storage_V3;
28 this->storage_V1 = storage_V1;
29 int __failure = 0;
30
31 {
32
33 py_V1 = Py_None;
34 {Py_XINCREF(py_V1);}
35 V1 = NULL;
36 {
37
38 this->__ERROR = __ERROR;
39 return 0;
40 __label_3:
41
42 double __DUMMY_3;
43
44 }
45 __label_1:
46
47 //std::cerr << "cleanup " << py_V1 << " " << V1 << "\n";
48 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V1, (py_V1->ob_refcnt));
49 if (V1)
50 {
51 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V1, (V1->ob_refcnt));
52 Py_XDECREF(V1);
53 }
54 //std::cerr << "cleanup done" << py_V1 << "\n";
55
56 {Py_XDECREF(py_V1);}
57
58 double __DUMMY_1;
59
60 }
61
62 Py_XDECREF(this->storage_V3);
63 Py_XDECREF(this->storage_V1);
64
65 if (__failure) {
66 // When there is a failure, this code puts the exception
67 // in __ERROR.
68 PyObject* err_type = NULL;
69 PyObject* err_msg = NULL;
70 PyObject* err_traceback = NULL;
71 PyErr_Fetch(&err_type, &err_msg, &err_traceback);
72 if (!err_type) {err_type = Py_None;Py_INCREF(Py_None);}
73 if (!err_msg) {err_msg = Py_None; Py_INCREF(Py_None);}
74 if (!err_traceback) {err_traceback = Py_None; Py_INCREF(Py_None);}
75 PyObject* old_err_type = PyList_GET_ITEM(__ERROR, 0);
76 PyObject* old_err_msg = PyList_GET_ITEM(__ERROR, 1);
77 PyObject* old_err_traceback = PyList_GET_ITEM(__ERROR, 2);
78 PyList_SET_ITEM(__ERROR, 0, err_type);
79 PyList_SET_ITEM(__ERROR, 1, err_msg);
80 PyList_SET_ITEM(__ERROR, 2, err_traceback);
81 {Py_XDECREF(old_err_type);}
82 {Py_XDECREF(old_err_msg);}
83 {Py_XDECREF(old_err_traceback);}
84 }
85 // The failure code is returned to index what code block failed.
86 return __failure;
87
88 }
89 void cleanup(void) {
90 __label_1:
91
92 //std::cerr << "cleanup " << py_V1 << " " << V1 << "\n";
93 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V1, (py_V1->ob_refcnt));
94 if (V1)
95 {
96 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V1, (V1->ob_refcnt));
97 Py_XDECREF(V1);
98 }
99 //std::cerr << "cleanup done" << py_V1 << "\n";
100
101 {Py_XDECREF(py_V1);}
102
103 double __DUMMY_1;
104 __label_3:
105
106 double __DUMMY_3;
107
108 Py_XDECREF(this->storage_V3);
109 Py_XDECREF(this->storage_V1);
110 }
111 int run(void) {
112 int __failure = 0;
113
114 PyObject* py_V3;
115 CudaNdarray * V3;
116 {
117
118 {
119
120 py_V3 = PyList_GET_ITEM(storage_V3, 0);
121 {Py_XINCREF(py_V3);}
122
123 assert(py_V3->ob_refcnt >= 2); // There should be at least one ref from the container object,
124 // and one ref from the local scope.
125
126 if (CudaNdarray_Check(py_V3))
127 {
128 //fprintf(stderr, "c_extract CNDA object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
129 V3 = (CudaNdarray*)py_V3;
130 //std::cerr << "c_extract " << V3 << '\n';
131 if (V3->nd != 1)
132 {
133 PyErr_Format(PyExc_RuntimeError, "Some CudaNdarray has rank %i, it was supposed to have rank 1", V3->nd);
134 V3 = NULL;
135 {__failure = 4; goto __label_4;};
136 }
137 //std::cerr << "c_extract " << V3 << " nd check passed\n";
138
139
140 assert(V3);
141 Py_INCREF(py_V3);
142 }
143 else
144 {
145 //fprintf(stderr, "FAILING c_extract CNDA object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
146 PyErr_SetString(PyExc_TypeError, "Argument not a CudaNdarray");
147 V3 = NULL;
148 {__failure = 4; goto __label_4;};
149 }
150 //std::cerr << "c_extract done " << V3 << '\n';
151
152
153 {
154
155 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} START\n";
156 //standard elemwise size checks
157
158
159 int dims[1] = {1};
160
161
162 int broadcasts_V3[1] = {0};
163
164
165 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} checking input V3\n";
166 if (1 != V3->nd)
167 {
168 PyErr_Format(PyExc_TypeError, "need 1 dims, not %i", V3->nd);
169 {__failure = 5; goto __label_5;};
170 }
171 for (int i = 0; i< 1; ++i)
172 {
173 dims[i] = (dims[i] == 1) ? CudaNdarray_HOST_DIMS(V3)[i] : dims[i];
174 if ((!(broadcasts_V3[i] && CudaNdarray_HOST_DIMS(V3)[i] == 1))&& (dims[i] != CudaNdarray_HOST_DIMS(V3)[i]))
175 {
176 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} checking input V3 failed\n";
177 PyErr_Format(PyExc_ValueError, "GpuElemwise. Input dimension mis-match. One of your inputs has shape[%i] == %i, but the output's size on that axis is %i.",
178 i,
179 CudaNdarray_HOST_DIMS(V3)[i],
180 dims[i]
181 );
182 {__failure = 5; goto __label_5;};
183 }
184 }
185
186
187 Py_XDECREF(V1);
188 V1 = V3;
189 Py_INCREF(V1);
190 for (int i = 0; (i< 1) && (V1); ++i) {
191 if (dims[i] != CudaNdarray_HOST_DIMS(V1)[i])
192 {
193 Py_DECREF(V1);
194 V1 = NULL;
195 {__failure = 5; goto __label_5;};
196 }
197 }
198 //std::cerr << "ELEMWISE NEW V1 nd" << V1->nd << "\n";
199 //std::cerr << "ELEMWISE NEW V1 data" << V1->devdata << "\n";
200
201
202 {
203 //new block so that failure gotos don't skip over variable initialization
204 //std::cerr << "calling callkernel\n";
205 if (callkernel_node_0(1, 0, dims
206
207
208 , CudaNdarray_DEV_DATA(V3), CudaNdarray_HOST_STRIDES(V3)
209
210
211 , CudaNdarray_DEV_DATA(V1), CudaNdarray_HOST_STRIDES(V1)
212
213
214 ))
215 {
216 // error
217
218
219 Py_DECREF(V1);
220 V1 = NULL;
221
222
223 {__failure = 5; goto __label_5;};
224 }
225 else // no error
226 {
227 }
228 }
229 //std::cerr << "C_CODE RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True} END\n";
230
231 __label_5:
232
233 double __DUMMY_5;
234
235 }
236 __label_4:
237
238 //std::cerr << "cleanup " << py_V3 << " " << V3 << "\n";
239 //fprintf(stderr, "c_cleanup CNDA py_object w refcnt %p %i\n", py_V3, (py_V3->ob_refcnt));
240 if (V3)
241 {
242 //fprintf(stderr, "c_cleanup CNDA cn_object w refcnt %p %i\n", V3, (V3->ob_refcnt));
243 Py_XDECREF(V3);
244 }
245 //std::cerr << "cleanup done" << py_V3 << "\n";
246
247 {Py_XDECREF(py_V3);}
248
249 double __DUMMY_4;
250
251 }
252 __label_2:
253
254 if (!__failure) {
255
256 //std::cerr << "sync\n";
257 if (NULL == V1) {
258 // failure: sync None to storage
259 Py_XDECREF(py_V1);
260 py_V1 = Py_None;
261 Py_INCREF(py_V1);
262 }
263 else
264 {
265 if (py_V1 != (PyObject*)V1)
266 {
267 Py_XDECREF(py_V1);
268 py_V1 = (PyObject*)V1;
269 Py_INCREF(py_V1);
270 }
271 assert(py_V1->ob_refcnt);
272 }
273
274 PyObject* old = PyList_GET_ITEM(storage_V1, 0);
275 {Py_XINCREF(py_V1);}
276 PyList_SET_ITEM(storage_V1, 0, py_V1);
277 {Py_XDECREF(old);}
278 }
279
280 double __DUMMY_2;
281
282 }
283
284
285 if (__failure) {
286 // When there is a failure, this code puts the exception
287 // in __ERROR.
288 PyObject* err_type = NULL;
289 PyObject* err_msg = NULL;
290 PyObject* err_traceback = NULL;
291 PyErr_Fetch(&err_type, &err_msg, &err_traceback);
292 if (!err_type) {err_type = Py_None;Py_INCREF(Py_None);}
293 if (!err_msg) {err_msg = Py_None; Py_INCREF(Py_None);}
294 if (!err_traceback) {err_traceback = Py_None; Py_INCREF(Py_None);}
295 PyObject* old_err_type = PyList_GET_ITEM(__ERROR, 0);
296 PyObject* old_err_msg = PyList_GET_ITEM(__ERROR, 1);
297 PyObject* old_err_traceback = PyList_GET_ITEM(__ERROR, 2);
298 PyList_SET_ITEM(__ERROR, 0, err_type);
299 PyList_SET_ITEM(__ERROR, 1, err_msg);
300 PyList_SET_ITEM(__ERROR, 2, err_traceback);
301 {Py_XDECREF(old_err_type);}
302 {Py_XDECREF(old_err_msg);}
303 {Py_XDECREF(old_err_traceback);}
304 }
305 // The failure code is returned to index what code block failed.
306 return __failure;
307
308 }
309 };
310
311
312 int __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_executor(__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6* self) {
313 return self->run();
314 }
315
316 void __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_destructor(void* executor, void* self) {
317 //printf("doing cleanup\n");
318 //fflush(stdout);
319 // ((__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6*)self)->cleanup();
320 // free(self);
321 delete ((__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6*)self);
322 //printf("done cleanup\n");
323 //fflush(stdout);
324 }
325
326 //////////////////////
327 //// Functions
328 //////////////////////
329 static PyObject * instantiate(PyObject * self, PyObject *argtuple) {
330 assert(PyTuple_Check(argtuple));
331 if (3 != PyTuple_Size(argtuple)){
332 PyErr_Format(PyExc_TypeError, "Wrong number of arguments, expected 3, got %i", (int)PyTuple_Size(argtuple));
333 return NULL;
334 }
335 __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6* struct_ptr = new __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6();
336 struct_ptr->init( PyTuple_GET_ITEM(argtuple, 0),PyTuple_GET_ITEM(argtuple, 1),PyTuple_GET_ITEM(argtuple, 2) );
337 PyObject* thunk = PyCObject_FromVoidPtrAndDesc((void*)(&__struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_executor), struct_ptr, __struct_compiled_op_b00d036aee58056c0a5d347463f1a2e6_destructor);
338 return thunk; }
339
340 //////////////////////
341 //// Module init
342 //////////////////////
343 static PyMethodDef MyMethods[] = {
344 {"instantiate", instantiate, METH_VARARGS, "undocumented"} ,
345 {NULL, NULL, 0, NULL}
346 };
347 PyMODINIT_FUNC initb00d036aee58056c0a5d347463f1a2e6(void){
348 import_array();
349 (void) Py_InitModule("b00d036aee58056c0a5d347463f1a2e6", MyMethods);
350 }
351
E...........F.......F.......F.......F.......F.......F......................F.....................................................E...FE..FFFFFEFFFFFFFFFF..FF..F...............F.......F...............ERROR (theano.gof.opt): Optimization failure due to: local_gpu_advanced_incsubtensor1
ERROR (theano.gof.opt): TRACEBACK:
ERROR (theano.gof.opt): Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 630, in local_gpu_advanced_incsubtensor1
return [host_from_gpu(GpuAdvancedIncSubtensor1()(gpu_x, gpu_y, *coords))]
File "/root/Theano/theano/gof/op.py", line 377, in __call__
node = self.make_node(*inputs, **kwargs)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1779, in make_node
assert x_.type.ndim == y_.type.ndim
AssertionError
FF............F.........EEEE........................................F................................................................................................................E..E......FFFF..........E...............FFFFFF......EEE.EEEEEE....EEEEE..EE....EEEEEEF.EE...E..........EEE..........E.E..................E.E.........F.FE.........................S.S..S....FFE........FFFFFFFFFFFFF.FFFFF.....E.E.EF..FF.E........FF...............................................................................................................E.......E.................ESSSSSSSSS...F.......................
======================================================================
ERROR: test_none (theano.compile.tests.test_function_module.T_function)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/compile/tests/test_function_module.py", line 41, in test_none
raise KnownFailureTest('See #254: Using None as function output leads to [] return value')
KnownFailureTest: See #254: Using None as function output leads to [] return value
======================================================================
ERROR: test_optimizations_preserved (theano.compile.tests.test_function_module.T_picklefunction)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/compile/tests/test_function_module.py", line 467, in test_optimizations_preserved
f = function([a, x, s, xm, sm], ((a.T.T)*(tensor.dot(xm, (sm.T.T.T)) + x).T * (x/x) + s))
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp8ay0Hn/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(s, <TensorType(float64, matrix)>)]')
======================================================================
ERROR: theano.compile.tests.test_inplace_opt_for_value.test_example_rnn
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/compile/tests/test_inplace_opt_for_value.py", line 207, in test_example_rnn
rnn = rnn_module.make()
File "/root/Theano/theano/compile/module.py", line 1141, in make
rval = self.make_no_init(mode)
File "/root/Theano/theano/compile/module.py", line 89, in make_no_init
rval = self.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 1054, in build
inst = super(Module, self).build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 819, in build
x = c.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 1054, in build
inst = super(Module, self).build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 819, in build
x = c.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 478, in build
rval = F.orig_function(inputs, outputs, effective_mode)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpVIgNEK/641e71fecc3034d48e1c5bcd7261f36b.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(params.1, <TensorType(float64, scalar)>, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, TensorConstant{1.0})]')
======================================================================
ERROR: theano.compile.tests.test_inplace_opt_for_value.test_WEIRD_STUFF
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/compile/tests/test_inplace_opt_for_value.py", line 250, in test_WEIRD_STUFF
rnn1 = rnn_module1.make(mode='FAST_RUN')
File "/root/Theano/theano/compile/module.py", line 1141, in make
rval = self.make_no_init(mode)
File "/root/Theano/theano/compile/module.py", line 89, in make_no_init
rval = self.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 1054, in build
inst = super(Module, self).build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 819, in build
x = c.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 1054, in build
inst = super(Module, self).build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 819, in build
x = c.build(mode, memo)
File "/root/Theano/theano/compile/module.py", line 478, in build
rval = F.orig_function(inputs, outputs, effective_mode)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpMakMFZ/641e71fecc3034d48e1c5bcd7261f36b.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(params.1, TensorConstant{-0.0010000000475}, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, TensorConstant{1.0})]')
======================================================================
ERROR: test_nnet (theano.compile.tests.test_misc.TestNnet)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/compile/tests/test_misc.py", line 45, in test_nnet
nnet = NNet(n_input = 3, n_hidden = 10)
File "/root/Theano/theano/compile/tests/test_misc.py", line 34, in __init__
updates = self.sgd_updates)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp_2dxFe/3bce8a91750e804425ff67dbd809426f.so: undefined symbol: ATL_dptsyrk', '[_dot22(w1, <TensorType(float64, col)>)]')
-------------------- >> begin captured stdout << ---------------------
TensorType(float64, scalar)
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: test_input_aliasing_affecting_inplace_operations (theano.compile.tests.test_pfunc.Test_aliasing_rules)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/compile/tests/test_pfunc.py", line 722, in test_input_aliasing_affecting_inplace_operations
theano.dot(x*2,m1)+theano.dot(y*3,m2))
File "/root/Theano/theano/compile/function.py", line 103, in function
accept_inplace=accept_inplace, name=name)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpLWYhjh/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, row)>, <TensorType(float64, matrix)>)]')
======================================================================
ERROR: test_partial_input_aliasing_affecting_inplace_operations (theano.compile.tests.test_pfunc.Test_aliasing_rules)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/compile/tests/test_pfunc.py", line 774, in test_partial_input_aliasing_affecting_inplace_operations
theano.dot(x*2,m1)+theano.dot(y*3,m2)+theano.dot(z*4,m3))
File "/root/Theano/theano/compile/function.py", line 103, in function
accept_inplace=accept_inplace, name=name)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpBjYZSH/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, row)>, <TensorType(float64, matrix)>)]')
======================================================================
ERROR: theano.gof.tests.test_lazy.test_ifelse
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/gof/tests/test_lazy.py", line 103, in test_ifelse
f = function([a,b,c], ifelse(a, notimpl(b), c),
File "/root/Theano/theano/ifelse.py", line 317, in ifelse
then_branch_elem = theano.tensor.as_tensor_variable(then_branch_elem)
File "/root/Theano/theano/tensor/basic.py", line 133, in as_tensor_variable
raise TypeError("Variable type field must be a TensorType.", x, x.type)
TypeError: ('Variable type field must be a TensorType.', <theano.gof.tests.test_lazy.NotImplementedOp object at 0x99dd6d0>.0, <theano.gof.type.Generic object at 0x29e8990>)
======================================================================
ERROR: Failure: ImportError (cannot import name PycudaElemwiseSourceModuleMakeThunkOp)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/loader.py", line 390, in loadTestsFromName
addr.filename, addr.module)
File "/usr/lib/pymodules/python2.7/nose/importer.py", line 39, in importFromPath
return self.importFromDir(dir_path, fqname)
File "/usr/lib/pymodules/python2.7/nose/importer.py", line 86, in importFromDir
mod = load_module(part_fqname, fh, filename, desc)
File "/root/Theano/theano/misc/tests/test_pycuda_example.py", line 17, in <module>
from theano.misc.pycuda_example import PycudaElemwiseSourceModuleOp, PycudaElemwiseKernelOp, PycudaElemwiseSourceModuleMakeThunkOp
ImportError: cannot import name PycudaElemwiseSourceModuleMakeThunkOp
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_run_nnet
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 114, in test_run_nnet
rval_cpu, tc = run_nnet(False, n_in=n_in, n_hid=n_hid)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 91, in run_nnet
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp9zwFlU/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(x, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_run_nnet_med
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 132, in test_run_nnet_med
rval_cpu = run_nnet(False, 10, 128, 50, 4, n_train=10000)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 91, in run_nnet
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpqMd4BR/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(x, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_run_nnet_small
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 136, in test_run_nnet_small
rval_cpu = run_nnet(False, 10, 10, 4, 4, n_train=100000)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 91, in run_nnet
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpKLUNkV/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(x, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_conv_nnet1
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 195, in test_conv_nnet1
rval_cpu = run_conv_nnet1(False)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 178, in run_conv_nnet1
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmphK_oAC/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_conv_nnet2
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 284, in test_conv_nnet2
rval_cpu = run_conv_nnet2(False)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 265, in run_conv_nnet2
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpGcBctd/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
loss type TensorType(float32, scalar)
building pfunc ...
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_28
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 556, in test_lenet_28
cpu_only=cpu_only, verbose=verbose, version=version)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp2kLnQ1/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 1e-06
ALLOCATING ARCH: w0 shape (20, 1, 5, 5)
ALLOCATING ARCH: w1 shape (30, 20, 5, 5)
ALLOCATING ARCH: v shape (1920, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_32
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 561, in test_lenet_32
verbose=verbose, version=version)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpImXGT7/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 1e-06
ALLOCATING ARCH: w0 shape (20, 1, 5, 5)
ALLOCATING ARCH: w1 shape (30, 20, 5, 5)
ALLOCATING ARCH: v shape (3000, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_32_long
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 568, in test_lenet_32_long
cpu_only=cpu_only, verbose=verbose, version=version)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpwLSCPo/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 1e-06
ALLOCATING ARCH: w0 shape (20, 1, 5, 5)
ALLOCATING ARCH: w1 shape (30, 20, 5, 5)
ALLOCATING ARCH: v shape (3000, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_64
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 576, in test_lenet_64
check_isfinite=True, version=version)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpoBAvRz/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 1e-06
ALLOCATING ARCH: w0 shape (20, 1, 7, 7)
ALLOCATING ARCH: w1 shape (30, 20, 7, 7)
ALLOCATING ARCH: v shape (15870, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_108
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 582, in test_lenet_108
check_isfinite=True, version=version)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp6Q3F8X/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 1e-06
ALLOCATING ARCH: w0 shape (20, 1, 7, 7)
ALLOCATING ARCH: w1 shape (30, 20, 7, 7)
ALLOCATING ARCH: v shape (60750, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: theano.sandbox.cuda.tests.test_mlp.test_lenet_256
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 588, in test_lenet_256
check_isfinite=True, version=version, float_atol=5e-5)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 470, in cmp_run_conv_nnet2_classif
check_isfinite=check_isfinite)
File "/root/Theano/theano/sandbox/cuda/tests/test_mlp.py", line 358, in build_conv_nnet2_classif
train = pfunc([x,y,lr], [loss], mode=mode, updates=[(p, p-g) for p,g in zip(params, gparams)])
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpwXTBVb/db54cda7213a885afa84abcc8d49d14d.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
float_atol 5e-05
ALLOCATING ARCH: w0 shape (20, 1, 9, 9)
ALLOCATING ARCH: w1 shape (30, 20, 9, 9)
ALLOCATING ARCH: v shape (403680, 10)
loss type TensorType(float32, scalar)
building pfunc ...
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: Test vector dot matrix
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_vector_matrix_dot.py", line 31, in test_dot_vm
no_gpu_f = theano.function([], theano.dot(v,m), mode = mode_without_gpu)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpGUX5Nq/e8e3c26a250b0207c77b5c54db6df16a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, row)>, <TensorType(float32, matrix)>)]')
======================================================================
ERROR: Test matrix dot vector
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/cuda/tests/test_vector_matrix_dot.py", line 51, in test_dot_mv
no_gpu_f = theano.function([], theano.dot(m,v), mode = mode_without_gpu)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpUBOrS3/e8e3c26a250b0207c77b5c54db6df16a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float32, matrix)>, <TensorType(float32, col)>)]')
======================================================================
ERROR: test_linalg.test_inverse_grad
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/sandbox/linalg/tests/test_linalg.py", line 161, in test_inverse_grad
tensor.verify_grad(matrix_inverse, [r], rng=numpy.random)
File "/root/Theano/theano/tensor/tensor_grad.py", line 664, in verify_grad
grad_fn = function(tensor_pt, symbolic_grad)
File "/root/Theano/theano/tensor/tensor_grad.py", line 611, in function
allow_input_downcast=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpAam1Hw/3bce8a91750e804425ff67dbd809426f.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, matrix)>, <TensorType(float64, matrix)>)]')
======================================================================
ERROR: test_alloc_inputs2 (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2344, in test_alloc_inputs2
"This tests depends on an optimization for scan "
KnownFailureTest: This tests depends on an optimization for scan that has not been implemented yet.
======================================================================
ERROR: test_grad_multiple_outs (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1239, in test_grad_multiple_outs
analytic_grad = grad_fn(v_u1,v_u2, v_x0,v_y0, vW_in1)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 570, in rval
fill_storage()
File "/root/Theano/theano/gof/cc.py", line 1178, in __call__
raise exc_type, exc_value, exc_trace
RuntimeError: ('Some CudaNdarray has a nonzero stride 1 on a broadcastable dimension 0', <CudaNdarrayType(float32, (True,))>)
======================================================================
ERROR: test_grad_multiple_outs_some_truncate (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1466, in test_grad_multiple_outs_some_truncate
analytic_grad = reset_rng_grad_fn(v_u, v_x0, vW_in)
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1463, in <lambda>
reset_rng_grad_fn = lambda *args : reset_rng_fn(grad_fn, *args)
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1458, in reset_rng_fn
out = fn(*args)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 448, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:4531)
TypeError: CudaNdarray.__setitem__: left must be a CudaNdarrays and right must be a CudaNdarrays or ndarray
======================================================================
ERROR: test_grad_multiple_outs_taps (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1303, in test_grad_multiple_outs_taps
analytic_grad = grad_fn(v_u1,v_u2, v_x0,v_y0, vW_in1)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 570, in rval
fill_storage()
File "/root/Theano/theano/gof/cc.py", line 1178, in __call__
raise exc_type, exc_value, exc_trace
RuntimeError: ('Some CudaNdarray has a nonzero stride 2 on a broadcastable dimension 0', <CudaNdarrayType(float32, row)>)
======================================================================
ERROR: test_grad_multiple_outs_taps_backwards (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1354, in test_grad_multiple_outs_taps_backwards
analytic_grad = grad_fn(v_u1,v_u2, v_x0,v_y0, vW_in1)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 570, in rval
fill_storage()
File "/root/Theano/theano/gof/cc.py", line 1178, in __call__
raise exc_type, exc_value, exc_trace
RuntimeError: ('Some CudaNdarray has a nonzero stride 2 on a broadcastable dimension 0', <CudaNdarrayType(float32, row)>)
======================================================================
ERROR: test_grad_one_output (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 1183, in test_grad_one_output
analytic_grad = grad_fn(v_u, v_x0, W_in, W)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 570, in rval
fill_storage()
File "/root/Theano/theano/gof/cc.py", line 1178, in __call__
raise exc_type, exc_value, exc_trace
RuntimeError: ('Some CudaNdarray has a nonzero stride 1 on a broadcastable dimension 0', <CudaNdarrayType(float32, (True,))>)
======================================================================
ERROR: test_infershape_seq_shorter_nsteps (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2532, in test_infershape_seq_shorter_nsteps
raise KnownFailureTest('This is a generic problem with infershape'
KnownFailureTest: This is a generic problem with infershape that has to be discussed and figured out
======================================================================
ERROR: test_outputs_info_not_typed (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/numpy/testing/decorators.py", line 213, in knownfailer
raise KnownFailureTest, msg
KnownFailureTest: This test fails because not typed outputs_info are always gived the smallest dtype. There is no upcast of outputs_info in scan for now.
======================================================================
ERROR: test_pickling (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/numpy/testing/decorators.py", line 215, in knownfailer
return f(*args, **kwargs)
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 221, in test_pickling
cPickle.dump(_my_f, f_out, protocol=-1)
PicklingError: Can't pickle <type 'instancemethod'>: attribute lookup __builtin__.instancemethod failed
======================================================================
ERROR: test_rop (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2260, in test_rop
tnu,tnh0,tnW = fn_test(v_u, v_h0, v_W, v_eu, v_eh0, v_eW)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 345, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:3094)
File "scan_perform.pyx", line 336, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:3006)
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 570, in rval
fill_storage()
File "/root/Theano/theano/gof/cc.py", line 1178, in __call__
raise exc_type, exc_value, exc_trace
RuntimeError: ('Some CudaNdarray has a nonzero stride 5 on a broadcastable dimension 0', <CudaNdarrayType(float32, row)>)
-------------------- >> begin captured logging << --------------------
theano.gof.opt: ERROR: EquilibriumOptimizer max'ed out by 'cut_gpu_constant_transfers'. You can safely raise the current threshold of 20.000000 with the theano flag 'optdb.max_use_ratio'.
--------------------- >> end captured logging << ---------------------
======================================================================
ERROR: test_while0 (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2403, in test_while0
out = f(vx)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 448, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:4531)
TypeError: CudaNdarray.__setitem__: left must be a CudaNdarrays and right must be a CudaNdarrays or ndarray
======================================================================
ERROR: test_while1 (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2418, in test_while1
out, out2 = f(vx)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 448, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:4531)
TypeError: CudaNdarray.__setitem__: left must be a CudaNdarrays and right must be a CudaNdarrays or ndarray
======================================================================
ERROR: test_while2 (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2512, in test_while2
out, out2 = f(vx)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 448, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:4531)
TypeError: CudaNdarray.__setitem__: left must be a CudaNdarrays and right must be a CudaNdarrays or ndarray
======================================================================
ERROR: test_while_infershape (test_scan.T_Scan)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/scan_module/tests/test_scan.py", line 2528, in test_while_infershape
out = f(vx)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/scan_module/scan_op.py", line 537, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/scan_module/scan_op.py", line 531, in <lambda>
self)
File "scan_perform.pyx", line 448, in theano.scan_module.scan_perform.perform (/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/scan_perform/mod.cpp:4531)
TypeError: CudaNdarray.__setitem__: left must be a CudaNdarrays and right must be a CudaNdarrays or ndarray
======================================================================
ERROR: test_convolution (theano.sparse.sandbox.test_sp.TestSP)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/sparse/sandbox/test_sp.py", line 51, in test_convolution
f = function([kerns, bias, input], output, mode=mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpY5dnwK/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, matrix)>, <TensorType(float64, matrix)>)]')
-------------------- >> begin captured stdout << ---------------------
*************************************************
TEST CONVOLUTION
*************************************************
**** Convolution Profiling Results ( FAST_COMPILE ) ****
Numpy processing time: 0.109368085861
Theano processing time: 0.0216829776764
--------------------- >> end captured stdout << ----------------------
======================================================================
ERROR: test_multilayer_conv (theano.sparse.sandbox.test_sp.TestSP)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/sparse/sandbox/test_sp.py", line 279, in test_multilayer_conv
l1propup = function([kerns[0], input], l1hid, mode=mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmprCFq7p/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, matrix)>, <TensorType(float64, matrix)>)]')
======================================================================
ERROR: test_c_against_mat_mul (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpOHBVYS/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_c_against_mat_transp_mul (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpkJF_ND/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_c_against_python (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpGfNUg1/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_c_against_sparse_mat_transp_mul (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpv0T6qT/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_gradient (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpOcfeTg/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_infer_shape (theano.tensor.nnet.tests.test_conv3d.TestConv3D)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/nnet/tests/test_conv3d.py", line 115, in setUp
self.H_func = function([], self.H, mode = mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpT1bKlR/b2be01623d69986f2c6c32bf30a888e8.so: undefined symbol: _gfortran_st_write_done', '[Conv3D(<TensorType(float32, 5D)>, <TensorType(float32, 5D)>, <TensorType(float32, vector)>, <TensorType(int64, vector)>)]')
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.CeilIntDivTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 226, in test_good
variables = f(*inputs)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 588, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/gof/op.py", line 510, in perform
raise utils.MethodNotDefined("perform", type(self), self.__class__.__name__)
MethodNotDefined: ('perform', <class 'theano.sandbox.cuda.basic_ops.GpuElemwise'>, 'GpuElemwise', 'Test <function ceil_intdiv at 0x2de9aa0>::scalar: Error occurred while calling the Function on the inputs [array([[ 0.59672642, 0.75082803, 0.30473137],\n [ 0.11184883, 0.64298058, -0.40273654]], dtype=float32), array([[ 0.65532041]], dtype=float32)]')
-------------------- >> begin captured logging << --------------------
theano.gof.opt: ERROR: Optimization failure due to: local_gpu_elemwise_0
theano.gof.opt: ERROR: TRACEBACK:
theano.gof.opt: ERROR: Traceback (most recent call last):
File "/root/Theano/theano/gof/opt.py", line 929, in process_node
replacements = lopt.transform(node)
File "/root/Theano/theano/sandbox/cuda/opt.py", line 166, in local_gpu_elemwise_0
upcasted = node.op.make_node(*[tensor.cast(i, 'float32') for i in node.inputs])
File "/root/Theano/theano/tensor/elemwise.py", line 469, in make_node
shadow = self.scalar_op.make_node(*[Scalar(dtype=i.type.dtype)() for i in inputs])
File "/root/Theano/theano/scalar/basic.py", line 694, in make_node
outputs = [t() for t in self.output_types([input.type for input in inputs])]
File "/root/Theano/theano/scalar/basic.py", line 2314, in output_types
% (self.inputs_type, tuple(input_types)))
TypeError: Wrong types for Composite. Expected (Scalar(float32), Scalar(int8)), got (Scalar(float32), Scalar(float32)).
--------------------- >> end captured logging << ---------------------
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.DotTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 204, in test_good
f = inplace_func(inputrs, node.outputs, mode=mode)
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpeX52Ms/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, row)>, <TensorType(float64, col)>)]', 'Test dot::empty1: Error occurred while trying to make a Function')
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.IntDivInplaceTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 226, in test_good
variables = f(*inputs)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 588, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/gof/op.py", line 510, in perform
raise utils.MethodNotDefined("perform", type(self), self.__class__.__name__)
MethodNotDefined: ('perform', <class 'theano.sandbox.cuda.basic_ops.GpuElemwise'>, 'GpuElemwise', 'Test int_div_inplace::scalar: Error occurred while calling the Function on the inputs [array([[ 0.59672642, 0.75082803, 0.30473137],\n [ 0.11184883, 0.64298058, -0.40273654]], dtype=float32), array([[ 0.65532041]], dtype=float32)]')
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.IntDivTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 226, in test_good
variables = f(*inputs)
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 588, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/gof/op.py", line 510, in perform
raise utils.MethodNotDefined("perform", type(self), self.__class__.__name__)
MethodNotDefined: ('perform', <class 'theano.sandbox.cuda.basic_ops.GpuElemwise'>, 'GpuElemwise', 'Test Elemwise{int_div,no_inplace}::column: Error occurred while calling the Function on the inputs [array([[-0.39390844, -0.36701167, -0.21703416],\n [-0.8021251 , -0.78069937, -0.04369795]], dtype=float32), array([[ 0.97700727],\n [-0.37521744]], dtype=float32)]')
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.RoundHalfToEvenInplaceTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 204, in test_good
f = inplace_func(inputrs, node.outputs, mode=mode)
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/sandbox/cuda/nvcc_compiler.py", line 274, in nvcc_module_compile_str
raise Exception('nvcc return status', p.returncode, 'for cmd', ' '.join(cmd))
Exception: ('nvcc return status', 2, 'for cmd', 'nvcc -shared -g --maxrregcount=32 -O3 -m64 -Xcompiler -Wno-write-strings,-fno-math-errno,-Wno-unused-label,-Wno-unused-variable,-fPIC,-m64 -Xlinker -rpath,/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -Xlinker -rpath,/usr/local/cuda/lib -Xlinker -rpath,/usr/local/cuda/lib64 -I/usr/local/cuda/include -I/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -I/usr/lib/pymodules/python2.7/numpy/core/include -I/usr/include/python2.7 -I/root/Theano/theano/sandbox/cuda -o /root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpeFkCoS/b00d036aee58056c0a5d347463f1a2e6.so mod.cu -L/usr/local/cuda/lib -L/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -L/usr/local/cuda/lib -L/usr/local/cuda/lib64 -L/usr/lib -lpython2.7 -lcudart -lcublas -lcuda_ndarray', '[GpuElemwise{RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True}}[(0, 0)](<CudaNdarrayType(float32, vector)>)]', 'Test round_half_to_even_inplace::corner_case: Error occurred while trying to make a Function')
======================================================================
ERROR: test_good (theano.tensor.tests.test_basic.RoundHalfToEvenTester)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 204, in test_good
f = inplace_func(inputrs, node.outputs, mode=mode)
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/sandbox/cuda/nvcc_compiler.py", line 274, in nvcc_module_compile_str
raise Exception('nvcc return status', p.returncode, 'for cmd', ' '.join(cmd))
Exception: ('nvcc return status', 2, 'for cmd', 'nvcc -shared -g --maxrregcount=32 -O3 -m64 -Xcompiler -Wno-write-strings,-fno-math-errno,-Wno-unused-label,-Wno-unused-variable,-fPIC,-m64 -Xlinker -rpath,/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -Xlinker -rpath,/usr/local/cuda/lib -Xlinker -rpath,/usr/local/cuda/lib64 -I/usr/local/cuda/include -I/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -I/usr/lib/pymodules/python2.7/numpy/core/include -I/usr/include/python2.7 -I/root/Theano/theano/sandbox/cuda -o /root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpSw4B_K/b00d036aee58056c0a5d347463f1a2e6.so mod.cu -L/usr/local/cuda/lib -L/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/cuda_ndarray -L/usr/local/cuda/lib -L/usr/local/cuda/lib64 -L/usr/lib -lpython2.7 -lcudart -lcublas -lcuda_ndarray', '[GpuElemwise{RoundHalfToEven{output_types_preference=transfer_type{0}, _op_use_c_code=True}}[(0, 0)](<CudaNdarrayType(float32, vector)>)]', 'Test Elemwise{round_half_to_even,no_inplace}::corner_case: Error occurred while trying to make a Function')
======================================================================
ERROR: test_infer_shape (theano.tensor.tests.test_basic.T_reshape)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3839, in test_infer_shape
self.assertTrue((f(a_val, [-1, 3]) == [4, 3]).all())
File "/root/Theano/theano/compile/function_module.py", line 613, in __call__
self.fn()
File "/root/Theano/theano/gof/link.py", line 344, in streamline_default_f
raise_with_op(node)
File "/root/Theano/theano/gof/link.py", line 340, in streamline_default_f
thunk()
File "/root/Theano/theano/gof/op.py", line 588, in rval
r = p(n, [x[0] for x in i], o)
File "/root/Theano/theano/sandbox/cuda/basic_ops.py", line 1719, in perform
out[0] = x.reshape(tuple(shp))
ValueError: size must remain unchanged, changed from 12 to -3
======================================================================
ERROR: test1_err_bounds (theano.tensor.tests.test_basic.T_subtensor)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 2004, in test1_err_bounds
if e[0] != 'index out of bounds':
IndexError: tuple index out of range
======================================================================
ERROR: test2_err_bounds1 (theano.tensor.tests.test_basic.T_subtensor)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 2140, in test2_err_bounds1
if e[0] != 'index out of bounds':
IndexError: tuple index out of range
======================================================================
ERROR: test_align_1_1 (theano.tensor.tests.test_basic.t_dot)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3512, in test_align_1_1
def test_align_1_1(self): self.not_aligned(rand(5), rand(6))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3503, in not_aligned
tz = eval_outputs([z])
File "/root/Theano/theano/tensor/tests/test_basic.py", line 61, in eval_outputs
variables = inplace_func([], outputs)()
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpGDpwuN/e8e3c26a250b0207c77b5c54db6df16a.so: undefined symbol: ATL_dptsyrk', '[_dot22(TensorConstant{[[ 0.40087..90291595]]}, TensorConstant{[[-0.97459..59950495]]})]')
======================================================================
ERROR: test_align_1_2 (theano.tensor.tests.test_basic.t_dot)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3513, in test_align_1_2
def test_align_1_2(self): self.not_aligned(rand(5), rand(6,4))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3503, in not_aligned
tz = eval_outputs([z])
File "/root/Theano/theano/tensor/tests/test_basic.py", line 61, in eval_outputs
variables = inplace_func([], outputs)()
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp4iwBWQ/e8e3c26a250b0207c77b5c54db6df16a.so: undefined symbol: ATL_dptsyrk', '[_dot22(TensorConstant{[[ 0.40087..90291595]]}, TensorConstant{[[-0.97459..16762519]]})]')
======================================================================
ERROR: test_align_2_1 (theano.tensor.tests.test_basic.t_dot)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3516, in test_align_2_1
def test_align_2_1(self): self.not_aligned(rand(5,4), rand(6,7))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3503, in not_aligned
tz = eval_outputs([z])
File "/root/Theano/theano/tensor/tests/test_basic.py", line 61, in eval_outputs
variables = inplace_func([], outputs)()
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp6PeBx8/e8e3c26a250b0207c77b5c54db6df16a.so: undefined symbol: ATL_dptsyrk', '[_dot22(TensorConstant{[[ 0.40087..50466359]]}, TensorConstant{[[-0.95352..76805127]]})]')
======================================================================
ERROR: test_broadcastable_patterns (theano.tensor.tests.test_basic.t_dot)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_basic.py", line 3577, in test_broadcastable_patterns
f = function([x,y,t], rval)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpSEuVli/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, (True, True))>, <TensorType(float64, col)>)]')
======================================================================
ERROR: theano.tensor.tests.test_basic.test_unalign
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/tensor/tests/test_basic.py", line 5135, in test_unalign
raise Exception("Expected an error from Theano!")
Exception: Expected an error from Theano!
======================================================================
ERROR: test_default_beta_y (theano.tensor.tests.test_blas.TestDgemv)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 1058, in test_default_beta_y
oy_func = theano.function([], oy, mode = mode_blas_opt)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmp_ti4pJ/b8ef61d4b75e3ce2ac153316ad78e79a.so: undefined symbol: ATL_dptsyrk', '[_dot22(<TensorType(float64, matrix)>, <TensorType(float64, col)>)]')
======================================================================
ERROR: test_scaled_A_plus_scaled_outer (theano.tensor.tests.test_blas.TestGer_local_gemm_to_ger)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 1448, in test_scaled_A_plus_scaled_outer
0.2 * self.A + 0.1 * T.outer(self.x, self.y))
File "/root/Theano/theano/tensor/tests/test_blas.py", line 1411, in function
return theano.function(inputs, outputs, self.mode)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpgzpE0f/28d7b51d5632b9c0896653ffc6246ab0.so: undefined symbol: ATL_dptsyrk', '[Gemm{no_inplace}(<TensorType(float64, matrix)>, TensorConstant{0.10000000149}, <TensorType(float64, col)>, <TensorType(float64, row)>, TensorConstant{0.20000000298})]')
======================================================================
ERROR: test10 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 128, in test10
self.cmp(self.rand(3,4), -1.0, self.rand(3,5), self.rand(5,4), 0.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpme4rk3/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test11 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 130, in test11
self.rand(3,5), self.rand(5,4), 1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpCZbq5M/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test12 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 132, in test12
self.rand(3,5), self.rand(5,4), -1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpiRSeJA/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test4 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 115, in test4
self.cmp(self.rand(3,4), 1.0, self.rand(3,5), self.rand(5,4), 0.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpayjb44/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test5 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 117, in test5
self.rand(3,5), self.rand(5,4), 1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpdDJ85P/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test6 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 119, in test6
self.rand(3,5), self.rand(5,4), -1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpfqcynp/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test7 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 121, in test7
self.rand(3,5), self.rand(5,4), 0.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpoo9f0b/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test8 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 123, in test8
self.rand(3,5), self.rand(5,4), 0.6)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpmXtzGE/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test9 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 125, in test9
self.rand(3,5), self.rand(5,4), -1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmphtQrUT/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test that dot args can be aliased
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 214, in test_destroy_map4
f = inplace_func([], gemm_inplace(Z, one, A, A, one))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpR0Qg2I/3cee44b63e3e59f70f3b313b2a1f4b04.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, TensorConstant{1.0}, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, TensorConstant{1.0})]')
======================================================================
ERROR: test_factorised_scalar (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 152, in test_factorised_scalar
f = theano.function([a,b],updates={s:lr1*T.dot(a,b)+l2_reg*lr2*s},mode=mode_not_fast_compile).maker.env.toposort()
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpncTdc3/641e71fecc3034d48e1c5bcd7261f36b.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, TensorConstant{0.00999999977648}, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, TensorConstant{0.000199999994948})]')
======================================================================
ERROR: test_non_contiguous (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 319, in test_non_contiguous
t(C, A, B)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 292, in t
mode=compile.Mode(optimizer=None, linker=l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmptgPp0u/1f5343b75e0ddfb3685a752fac1ac5dc.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, <TensorType(float64, scalar)>, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, <TensorType(float64, scalar)>)]')
======================================================================
ERROR: test_shape_0 (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 135, in test_shape_0
self.cmp(self.rand(0,4), -1.0, self.rand(0,5), self.rand(5,4), -1.0)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 84, in cmp
cmp_linker(copy(z), a, x, y, b, 'c|py')
File "/root/Theano/theano/tensor/tests/test_blas.py", line 70, in cmp_linker
f = inplace_func([tz,ta,tx,ty,tb], gemm_inplace(tz,ta,tx,ty,tb), mode=compile.Mode(optimizer = None, linker = l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpvtFpc1/07be941989407ef367c5091c5f571ae7.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float32, matrix)>, <TensorType(float32, scalar)>, <TensorType(float32, matrix)>, <TensorType(float32, matrix)>, <TensorType(float32, scalar)>)]')
======================================================================
ERROR: test_transposes (theano.tensor.tests.test_blas.t_gemm)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/root/Theano/theano/tensor/tests/test_blas.py", line 251, in test_transposes
t(C,A,B)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 234, in t
f = inplace_func([], gemm_inplace(tz,ta,tx,ty,tb), mode = compile.Mode(optimizer = None, linker=l))
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpgzdHqe/1f5343b75e0ddfb3685a752fac1ac5dc.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, <TensorType(float64, scalar)>, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, <TensorType(float64, scalar)>)]')
======================================================================
ERROR: Many subgraphs whose dots can be eliminated
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 436, in test_gemm_opt0
just_gemm([X,Y,Z,a,b], [T.dot(X,Y) * a + Z * b])
File "/root/Theano/theano/tensor/tests/test_blas.py", line 398, in just_gemm
mode='FAST_RUN')
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpN1r6yA/1f5343b75e0ddfb3685a752fac1ac5dc.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, <TensorType(float64, scalar)>, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, <TensorType(float64, scalar)>)]')
======================================================================
ERROR: This is the pattern that shows up in the autoencoder
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 466, in test_gemm_opt_double_gemm
ishapes=[(4,3), (3,5), (4,5), (), (), (5,9), (9,4), ()])
File "/root/Theano/theano/tensor/tests/test_blas.py", line 398, in just_gemm
mode='FAST_RUN')
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpD8BSTB/1f5343b75e0ddfb3685a752fac1ac5dc.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(<TensorType(float64, matrix)>, <TensorType(float64, scalar)>, <TensorType(float64, matrix)>, <TensorType(float64, matrix)>, <TensorType(float64, scalar)>)]')
======================================================================
ERROR: theano.tensor.tests.test_blas.test_gemm_nested
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 607, in test_gemm_nested
max_graphlen=1)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 398, in just_gemm
mode='FAST_RUN')
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)
File "/root/Theano/theano/gof/cmodule.py", line 839, in module_from_key
module = compile_steps.next()
File "/root/Theano/theano/gof/cc.py", line 1019, in compile_cmodule_by_step
preargs=preargs)
File "/root/Theano/theano/gof/cmodule.py", line 1420, in gcc_module_compile_str
return dlimport(lib_filename)
File "/root/Theano/theano/gof/cmodule.py", line 186, in dlimport
rval = __import__(module_name, {}, {}, [module_name])
ImportError: ('/root/.theano/compiledir_Linux-3.0.0-14-virtual-x86_64-with-Ubuntu-11.10-oneiric-x86_64-2.7.2+-0.5.0rc1.dev-c6fc9734f1602bbbb9335bd61e49872b1635b3de/tmpa7AIqV/1f5343b75e0ddfb3685a752fac1ac5dc.so: undefined symbol: ATL_dptsyrk', '[Gemm{inplace}(Z, <TensorType(float64, scalar)>, X, Y, <TensorType(float64, scalar)>)]')
======================================================================
ERROR: theano.tensor.tests.test_blas.test_gemm_opt_wishlist
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/pymodules/python2.7/nose/case.py", line 187, in runTest
self.test(*self.arg)
File "/root/Theano/theano/tensor/tests/test_blas.py", line 623, in test_gemm_opt_wishlist
just_gemm([X,Y,Z,a,b], [(b * b) * Z * a + (a * a) * T.dot(X,Y) + b * T.dot(X,Y)])
File "/root/Theano/theano/tensor/tests/test_blas.py", line 398, in just_gemm
mode='FAST_RUN')
File "/root/Theano/theano/tensor/tests/test_basic.py", line 57, in inplace_func
accept_inplace=True)
File "/root/Theano/theano/compile/function.py", line 114, in function
profile=profile)
File "/root/Theano/theano/compile/pfunc.py", line 439, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/root/Theano/theano/compile/function_module.py", line 1241, in orig_function
defaults)
File "/root/Theano/theano/compile/function_module.py", line 1091, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/root/Theano/theano/gof/link.py", line 377, in make_thunk
output_storage = output_storage)[:3]
File "/root/Theano/theano/gof/cc.py", line 1261, in make_all
no_recycling)]
File "/root/Theano/theano/gof/op.py", line 566, in make_thunk
output_storage=node_output_storage)
File "/root/Theano/theano/gof/cc.py", line 786, in make_thunk
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/root/Theano/theano/gof/cc.py", line 1092, in cthunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_lock=keep_lock)