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devtools::update_packages install packages multiple times
grep 'DONE ' update_packages.log | sort | uniq -c | sort -bgr
9 * DONE (rlang)
7 * DONE (withr)
3 * DONE (scales)
3 * DONE (pkgbuild)
2 * DONE (rcmdcheck)
2 * DONE (pkgload)
2 * DONE (ggplot2)
1 * DONE (tidyjson)
1 * DONE (plotly)
1 * DONE (lgbdl)
1 * DONE (github)
1 * DONE (ggvis)
1 * DONE (devtools)
grep 'Skip' update_packages.log | sort | uniq -c | sort -bgr
5 Skipping rlang, it is already being installed.
4 Skipping withr, it is already being installed.
4 Skipping pkgbuild, it is already being installed.
1 Skipping scales, it is already being installed.
1 Skipping rcmdcheck, it is already being installed.
1 Skipping pkgload, it is already being installed.
1 Skipping git2r, it is already being installed.
1 Skipping ggplot2, it is already being installed.
R version 3.5.0 (2018-04-23) -- "Joy in Playing"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin15.6.0 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> devtools::update_packages(TRUE, type = "binary")
Downloading GitHub repo r-lib/devtools@master
from URL https://api.github.com/repos/r-lib/devtools/zipball/master
Installing devtools
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc448216f20/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc472f8157e/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Installing pkgbuild
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Skipping rlang, it is already being installed.
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Skipping withr, it is already being installed.
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4bb66f33/r-lib-pkgbuild-0457039 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘pkgbuild’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (pkgbuild)
Downloading GitHub repo r-lib/pkgload@master
from URL https://api.github.com/repos/r-lib/pkgload/zipball/master
Installing pkgload
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Skipping rlang, it is already being installed.
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Skipping withr, it is already being installed.
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Skipping pkgbuild, it is already being installed.
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc41c38362b/r-lib-pkgload-35efedd \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘pkgload’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c unlock.c -o unlock.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pkgload.so unlock.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/pkgload/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (pkgload)
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Skipping pkgbuild, it is already being installed.
Downloading GitHub repo r-lib/rcmdcheck@master
from URL https://api.github.com/repos/r-lib/rcmdcheck/zipball/master
Installing rcmdcheck
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Skipping rlang, it is already being installed.
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Skipping withr, it is already being installed.
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4780820dd/r-lib-rcmdcheck-ad42561 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rcmdcheck’ ...
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (rcmdcheck)
Downloading GitHub repo ropensci/git2r@master
from URL https://api.github.com/repos/ropensci/git2r/zipball/master
Installing git2r
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4665d084a/ropensci-git2r-91a169d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘git2r’ ...
checking build system type... x86_64-apple-darwin17.5.0
checking host system type... x86_64-apple-darwin17.5.0
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for brew... yes
checking for pkg-config... /usr/local/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking size of void*... 8
checking for library containing inflate... -lz
checking for library containing EVP_EncryptInit... -lcrypto
checking for library containing SSL_library_init... -lssl
checking for library containing OPENSSL_init_ssl... no
checking for library containing libssh2_version... -lssh2
checking for ld used by clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking for shared library run path origin... /bin/sh: tools/config.rpath: No such file or directory
done
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for iconv... yes
checking for working iconv... yes
checking how to link with libiconv... -liconv
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for gawk... gawk
checking for curl-config... /usr/bin/curl-config
checking for the version of libcurl... 7.54.0
checking whether libcurl is usable... yes
checking for curl_free... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for struct stat.st_mtim... no
checking for struct stat.st_mtimespec... yes
checking for struct stat.st_mtime_nsec... no
checking for struct stat.st_mtimespec.tv_nsec... yes
checking for futimens... yes
checking for qsort_r... yes
checking for qsort_s... no
----- Results of the git2r package configure -----
OpenSSL to talk over HTTPS...........: yes
LibSSH2 to enable the SSH transport..: yes
--------------------------------------------------
configure: creating ./config.status
config.status: creating src/Makevars
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r.c -o git2r.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_S3.c -o git2r_S3.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_arg.c -o git2r_arg.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_blame.c -o git2r_blame.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_blob.c -o git2r_blob.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_branch.c -o git2r_branch.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_checkout.c -o git2r_checkout.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_clone.c -o git2r_clone.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_commit.c -o git2r_commit.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_config.c -o git2r_config.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_cred.c -o git2r_cred.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_diff.c -o git2r_diff.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_error.c -o git2r_error.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_graph.c -o git2r_graph.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_index.c -o git2r_index.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_merge.c -o git2r_merge.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_note.c -o git2r_note.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_object.c -o git2r_object.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_odb.c -o git2r_odb.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_oid.c -o git2r_oid.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_push.c -o git2r_push.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_reference.c -o git2r_reference.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_reflog.c -o git2r_reflog.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_remote.c -o git2r_remote.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_repository.c -o git2r_repository.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_reset.c -o git2r_reset.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_revparse.c -o git2r_revparse.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_signature.c -o git2r_signature.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_stash.c -o git2r_stash.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_status.c -o git2r_status.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_tag.c -o git2r_tag.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_transfer.c -o git2r_transfer.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c git2r_tree.c -o git2r_tree.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/apply.c -o libgit2/src/apply.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/attr.c -o libgit2/src/attr.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/blame.c -o libgit2/src/blame.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/blob.c -o libgit2/src/blob.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/branch.c -o libgit2/src/branch.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/buffer.c -o libgit2/src/buffer.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/cache.c -o libgit2/src/cache.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/checkout.c -o libgit2/src/checkout.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/clone.c -o libgit2/src/clone.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/commit.c -o libgit2/src/commit.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/config_file.c -o libgit2/src/config_file.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/config_parse.c -o libgit2/src/config_parse.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/config.c -o libgit2/src/config.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/crlf.c -o libgit2/src/crlf.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/date.c -o libgit2/src/date.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/delta.c -o libgit2/src/delta.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/describe.c -o libgit2/src/describe.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_generate.c -o libgit2/src/diff_generate.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_parse.c -o libgit2/src/diff_parse.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/diff.c -o libgit2/src/diff.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/errors.c -o libgit2/src/errors.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/fetch.c -o libgit2/src/fetch.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/fetchhead.c -o libgit2/src/fetchhead.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/filebuf.c -o libgit2/src/filebuf.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/fileops.c -o libgit2/src/fileops.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/filter.c -o libgit2/src/filter.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/fnmatch.c -o libgit2/src/fnmatch.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/global.c -o libgit2/src/global.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/graph.c -o libgit2/src/graph.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/hash.c -o libgit2/src/hash.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/hashsig.c -o libgit2/src/hashsig.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/ident.c -o libgit2/src/ident.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/idxmap.c -o libgit2/src/idxmap.o
libgit2/src/idxmap.c:23:1: warning: unused function 'kh_destroy_idxicase' [-Wunused-function]
__KHASH_IMPL(idxicase, static kh_inline, const git_index_entry *, git_index_entry *, 1, idxentry_hash, idxentry_icase_equal)
^
libgit2/src/khash.h:210:13: note: expanded from macro '__KHASH_IMPL'
SCOPE void kh_destroy_##name(kh_##name##_t *h) \
^
<scratch space>:155:1: note: expanded from here
kh_destroy_idxicase
^
libgit2/src/idxmap.c:23:1: warning: unused function 'kh_clear_idxicase' [-Wunused-function]
libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL'
SCOPE void kh_clear_##name(kh_##name##_t *h) \
^
<scratch space>:158:1: note: expanded from here
kh_clear_idxicase
^
2 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/ignore.c -o libgit2/src/ignore.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/index.c -o libgit2/src/index.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/indexer.c -o libgit2/src/indexer.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/iterator.c -o libgit2/src/iterator.o
libgit2/src/iterator.c:481:17: warning: unused function 'tree_iterator_entry_cmp' [-Wunused-function]
GIT_INLINE(int) tree_iterator_entry_cmp(const void *ptr_a, const void *ptr_b)
^
1 warning generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/merge_driver.c -o libgit2/src/merge_driver.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/merge_file.c -o libgit2/src/merge_file.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/merge.c -o libgit2/src/merge.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/message.c -o libgit2/src/message.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/mwindow.c -o libgit2/src/mwindow.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/netops.c -o libgit2/src/netops.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/notes.c -o libgit2/src/notes.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/object_api.c -o libgit2/src/object_api.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/object.c -o libgit2/src/object.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/odb_loose.c -o libgit2/src/odb_loose.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/odb_mempack.c -o libgit2/src/odb_mempack.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/odb_pack.c -o libgit2/src/odb_pack.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/odb.c -o libgit2/src/odb.o
libgit2/src/odb.c:1389:11: warning: format specifies type 'ssize_t' (aka 'long') but the argument has type 'git_off_t' (aka 'long long') [-Wformat]
action, stream->declared_size, stream->received_bytes);
^~~~~~~~~~~~~~~~~~~~~
libgit2/src/odb.c:1389:34: warning: format specifies type 'ssize_t' (aka 'long') but the argument has type 'git_off_t' (aka 'long long') [-Wformat]
action, stream->declared_size, stream->received_bytes);
^~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/offmap.c -o libgit2/src/offmap.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/oid.c -o libgit2/src/oid.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/oidarray.c -o libgit2/src/oidarray.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/oidmap.c -o libgit2/src/oidmap.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/pack-objects.c -o libgit2/src/pack-objects.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/pack.c -o libgit2/src/pack.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/parse.c -o libgit2/src/parse.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/patch_generate.c -o libgit2/src/patch_generate.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/patch_parse.c -o libgit2/src/patch_parse.o
libgit2/src/patch_parse.c:461:12: warning: unused function 'parse_number' [-Wunused-function]
static int parse_number(git_off_t *out, git_patch_parse_ctx *ctx)
^
1 warning generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/patch.c -o libgit2/src/patch.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/path.c -o libgit2/src/path.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/pathspec.c -o libgit2/src/pathspec.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/pool.c -o libgit2/src/pool.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/posix.c -o libgit2/src/posix.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/pqueue.c -o libgit2/src/pqueue.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/proxy.c -o libgit2/src/proxy.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/push.c -o libgit2/src/push.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/rebase.c -o libgit2/src/rebase.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/refdb_fs.c -o libgit2/src/refdb_fs.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/refdb.c -o libgit2/src/refdb.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/reflog.c -o libgit2/src/reflog.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/refs.c -o libgit2/src/refs.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/refspec.c -o libgit2/src/refspec.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/remote.c -o libgit2/src/remote.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/repository.c -o libgit2/src/repository.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/reset.c -o libgit2/src/reset.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/revert.c -o libgit2/src/revert.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/revparse.c -o libgit2/src/revparse.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/revwalk.c -o libgit2/src/revwalk.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/settings.c -o libgit2/src/settings.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/sha1_lookup.c -o libgit2/src/sha1_lookup.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/signature.c -o libgit2/src/signature.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/sortedcache.c -o libgit2/src/sortedcache.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/stash.c -o libgit2/src/stash.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/status.c -o libgit2/src/status.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/strmap.c -o libgit2/src/strmap.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/submodule.c -o libgit2/src/submodule.o
libgit2/src/submodule.c:88:1: warning: unused function 'kh_init_str' [-Wunused-function]
__KHASH_IMPL(
^
libgit2/src/khash.h:207:23: note: expanded from macro '__KHASH_IMPL'
SCOPE kh_##name##_t *kh_init_##name(void) { \
^
<scratch space>:17:1: note: expanded from here
kh_init_str
^
libgit2/src/submodule.c:88:1: warning: unused function 'kh_destroy_str' [-Wunused-function]
libgit2/src/khash.h:210:13: note: expanded from macro '__KHASH_IMPL'
SCOPE void kh_destroy_##name(kh_##name##_t *h) \
^
<scratch space>:22:1: note: expanded from here
kh_destroy_str
^
libgit2/src/submodule.c:88:1: warning: unused function 'kh_clear_str' [-Wunused-function]
libgit2/src/khash.h:218:13: note: expanded from macro '__KHASH_IMPL'
SCOPE void kh_clear_##name(kh_##name##_t *h) \
^
<scratch space>:25:1: note: expanded from here
kh_clear_str
^
libgit2/src/submodule.c:88:1: warning: unused function 'kh_get_str' [-Wunused-function]
libgit2/src/khash.h:225:16: note: expanded from macro '__KHASH_IMPL'
SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key) \
^
<scratch space>:28:1: note: expanded from here
kh_get_str
^
libgit2/src/submodule.c:88:1: warning: unused function 'kh_put_str' [-Wunused-function]
libgit2/src/khash.h:302:16: note: expanded from macro '__KHASH_IMPL'
SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \
^
<scratch space>:34:1: note: expanded from here
kh_put_str
^
libgit2/src/submodule.c:88:1: warning: unused function 'kh_del_str' [-Wunused-function]
libgit2/src/khash.h:344:13: note: expanded from macro '__KHASH_IMPL'
SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \
^
<scratch space>:39:1: note: expanded from here
kh_del_str
^
6 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/sysdir.c -o libgit2/src/sysdir.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/tag.c -o libgit2/src/tag.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/thread-utils.c -o libgit2/src/thread-utils.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/trace.c -o libgit2/src/trace.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/trailer.c -o libgit2/src/trailer.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transaction.c -o libgit2/src/transaction.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transport.c -o libgit2/src/transport.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/tree-cache.c -o libgit2/src/tree-cache.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/tree.c -o libgit2/src/tree.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/tsort.c -o libgit2/src/tsort.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/util.c -o libgit2/src/util.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/varint.c -o libgit2/src/varint.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/vector.c -o libgit2/src/vector.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/worktree.c -o libgit2/src/worktree.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/zstream.c -o libgit2/src/zstream.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/hash/sha1dc/sha1.c -o libgit2/src/hash/sha1dc/sha1.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/hash/sha1dc/ubc_check.c -o libgit2/src/hash/sha1dc/ubc_check.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/streams/curl.c -o libgit2/src/streams/curl.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/streams/openssl.c -o libgit2/src/streams/openssl.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/streams/socket.c -o libgit2/src/streams/socket.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/streams/stransport.c -o libgit2/src/streams/stransport.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/streams/tls.c -o libgit2/src/streams/tls.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/auth.c -o libgit2/src/transports/auth.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/cred_helpers.c -o libgit2/src/transports/cred_helpers.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/cred.c -o libgit2/src/transports/cred.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/git.c -o libgit2/src/transports/git.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/http.c -o libgit2/src/transports/http.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/local.c -o libgit2/src/transports/local.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/smart_pkt.c -o libgit2/src/transports/smart_pkt.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/smart_protocol.c -o libgit2/src/transports/smart_protocol.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/smart.c -o libgit2/src/transports/smart.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/transports/ssh.c -o libgit2/src/transports/ssh.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/unix/map.c -o libgit2/src/unix/map.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/unix/realpath.c -o libgit2/src/unix/realpath.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xdiffi.c -o libgit2/src/xdiff/xdiffi.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xemit.c -o libgit2/src/xdiff/xemit.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xhistogram.c -o libgit2/src/xdiff/xhistogram.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xmerge.c -o libgit2/src/xdiff/xmerge.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xpatience.c -o libgit2/src/xdiff/xpatience.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xprepare.c -o libgit2/src/xdiff/xprepare.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/src/xdiff/xutils.c -o libgit2/src/xdiff/xutils.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -DGIT_ARCH_64 -I/usr/local/opt/openssl/include -I/usr/local/opt/libssh2/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DLIBGIT2_NO_FEATURES_H -DR_NO_REMAP -DSTRICT_R_HEADERS -DGIT_SHA1_COLLISIONDETECT -DSHA1DC_NO_STANDARD_INCLUDES=1 -DSHA1DC_CUSTOM_INCLUDE_SHA1_C=\"common.h\" -DSHA1DC_CUSTOM_INCLUDE_UBC_CHECK_C=\"common.h\" -DGIT_SECURE_TRANSPORT=1 -DGIT_HTTPS=1 -DGIT_SSH -DGIT_CURL -DGIT_USE_ICONV -DGIT_USE_STAT_MTIMESPEC -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fPIC -Wall -g -O2 -c libgit2/deps/http-parser/http_parser.c -o libgit2/deps/http-parser/http_parser.o
ar rcs libmygit.a libgit2/src/annotated_commit.o libgit2/src/apply.o libgit2/src/attr_file.o libgit2/src/attr.o libgit2/src/attrcache.o libgit2/src/blame_git.o libgit2/src/blame.o libgit2/src/blob.o libgit2/src/branch.o libgit2/src/buf_text.o libgit2/src/buffer.o libgit2/src/cache.o libgit2/src/checkout.o libgit2/src/cherrypick.o libgit2/src/clone.o libgit2/src/commit_list.o libgit2/src/commit.o libgit2/src/config_cache.o libgit2/src/config_file.o libgit2/src/config_parse.o libgit2/src/config.o libgit2/src/crlf.o libgit2/src/date.o libgit2/src/delta.o libgit2/src/describe.o libgit2/src/diff_driver.o libgit2/src/diff_file.o libgit2/src/diff_generate.o libgit2/src/diff_parse.o libgit2/src/diff_print.o libgit2/src/diff_stats.o libgit2/src/diff_tform.o libgit2/src/diff_xdiff.o libgit2/src/diff.o libgit2/src/errors.o libgit2/src/fetch.o libgit2/src/fetchhead.o libgit2/src/filebuf.o libgit2/src/fileops.o libgit2/src/filter.o libgit2/src/fnmatch.o libgit2/src/global.o libgit2/src/graph.o libgit2/src/hash.o libgit2/src/hashsig.o libgit2/src/ident.o libgit2/src/idxmap.o libgit2/src/ignore.o libgit2/src/index.o libgit2/src/indexer.o libgit2/src/iterator.o libgit2/src/merge_driver.o libgit2/src/merge_file.o libgit2/src/merge.o libgit2/src/message.o libgit2/src/mwindow.o libgit2/src/netops.o libgit2/src/notes.o libgit2/src/object_api.o libgit2/src/object.o libgit2/src/odb_loose.o libgit2/src/odb_mempack.o libgit2/src/odb_pack.o libgit2/src/odb.o libgit2/src/offmap.o libgit2/src/oid.o libgit2/src/oidarray.o libgit2/src/oidmap.o libgit2/src/pack-objects.o libgit2/src/pack.o libgit2/src/parse.o libgit2/src/patch_generate.o libgit2/src/patch_parse.o libgit2/src/patch.o libgit2/src/path.o libgit2/src/pathspec.o libgit2/src/pool.o libgit2/src/posix.o libgit2/src/pqueue.o libgit2/src/proxy.o libgit2/src/push.o libgit2/src/rebase.o libgit2/src/refdb_fs.o libgit2/src/refdb.o libgit2/src/reflog.o libgit2/src/refs.o libgit2/src/refspec.o libgit2/src/remote.o libgit2/src/repository.o libgit2/src/reset.o libgit2/src/revert.o libgit2/src/revparse.o libgit2/src/revwalk.o libgit2/src/settings.o libgit2/src/sha1_lookup.o libgit2/src/signature.o libgit2/src/sortedcache.o libgit2/src/stash.o libgit2/src/status.o libgit2/src/strmap.o libgit2/src/submodule.o libgit2/src/sysdir.o libgit2/src/tag.o libgit2/src/thread-utils.o libgit2/src/trace.o libgit2/src/trailer.o libgit2/src/transaction.o libgit2/src/transport.o libgit2/src/tree-cache.o libgit2/src/tree.o libgit2/src/tsort.o libgit2/src/util.o libgit2/src/varint.o libgit2/src/vector.o libgit2/src/worktree.o libgit2/src/zstream.o libgit2/src/hash/sha1dc/sha1.o libgit2/src/hash/sha1dc/ubc_check.o libgit2/src/streams/curl.o libgit2/src/streams/openssl.o libgit2/src/streams/socket.o libgit2/src/streams/stransport.o libgit2/src/streams/tls.o libgit2/src/transports/auth.o libgit2/src/transports/cred_helpers.o libgit2/src/transports/cred.o libgit2/src/transports/git.o libgit2/src/transports/http.o libgit2/src/transports/local.o libgit2/src/transports/smart_pkt.o libgit2/src/transports/smart_protocol.o libgit2/src/transports/smart.o libgit2/src/transports/ssh.o libgit2/src/unix/map.o libgit2/src/unix/realpath.o libgit2/src/xdiff/xdiffi.o libgit2/src/xdiff/xemit.o libgit2/src/xdiff/xhistogram.o libgit2/src/xdiff/xmerge.o libgit2/src/xdiff/xpatience.o libgit2/src/xdiff/xprepare.o libgit2/src/xdiff/xutils.o libgit2/deps/http-parser/http_parser.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -L. -lmygit -lssh2 -lssl -lcrypto -lz -L/usr/local/opt/openssl/lib -L/usr/local/opt/libssh2/lib -framework Security -framework CoreFoundation -lcurl -liconv -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r/libs
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Error: package or namespace load failed for ‘git2r’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r/libs/git2r.so':
dlopen(/Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r/libs/git2r.so, 6): Library not loaded: @loader_path/libcrypto.1.0.0.dylib
Referenced from: /Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r/libs/git2r.so
Reason: image not found
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/git2r’
Installation failed: run(bin, args = real_cmdargs, stdout_line_callback = real_callback(stdout), stderr_line_callback = real_callback(stderr), stdout_callback = real_block_callback, stderr_callback = real_block_callback, echo_cmd = echo, echo = show, spinner = spinner, error_on_status = fail_on_status, timeout = timeout) : System command error
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4618810b2/r-lib-devtools-13ee56b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘devtools’ ...
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (devtools)
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Skipping pkgbuild, it is already being installed.
Downloading GitHub repo r-lib/pkgload@master
from URL https://api.github.com/repos/r-lib/pkgload/zipball/master
Skipping pkgload, it is already being installed.
Downloading GitHub repo r-lib/rcmdcheck@master
from URL https://api.github.com/repos/r-lib/rcmdcheck/zipball/master
Skipping rcmdcheck, it is already being installed.
Downloading GitHub repo ropensci/git2r@master
from URL https://api.github.com/repos/ropensci/git2r/zipball/master
Skipping git2r, it is already being installed.
Downloading GitHub repo tidyverse/ggplot2@master
from URL https://api.github.com/repos/tidyverse/ggplot2/zipball/master
Installing ggplot2
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44d3a9a5a/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo hadley/scales@master
from URL https://api.github.com/repos/hadley/scales/zipball/master
Installing scales
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc43877d8db/hadley-scales-d767915 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘scales’ ...
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c colors.cpp -o colors.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scales.so RcppExports.o colors.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/scales/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
Loading required package: scales
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (scales)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc424e14640/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4201df7eb/tidyverse-ggplot2-a6b77c9 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘ggplot2’ ...
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ggplot2)
Downloading GitHub repo rstudio/ggvis@master
from URL https://api.github.com/repos/rstudio/ggvis/zipball/master
Installing ggvis
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc453d26f/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc47406ef3f/rstudio-ggvis-0437ede \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘ggvis’ ...
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (ggvis)
Downloading GitHub repo cscheid/rgithub@master
from URL https://api.github.com/repos/cscheid/rgithub/zipball/master
Installing github
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc47ba21128/cscheid-rgithub-5806914 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘github’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (github)
Downloading GitHub repo Laurae2/lgbdl@master
from URL https://api.github.com/repos/Laurae2/lgbdl/zipball/master
Installing lgbdl
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44d166cb7/Laurae2-lgbdl-afff103 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘lgbdl’ ...
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (lgbdl)
Downloading GitHub repo Microsoft/LightGBM@master
from URL https://api.github.com/repos/Microsoft/LightGBM/zipball/master
Installing lightgbm
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44132e0c9/Microsoft-LightGBM-899151f/R-package \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘lightgbm’ ...
** libs
installing via 'install.libs.R' to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/lightgbm
-- The C compiler identification is AppleClang 9.1.0.9020039
-- The CXX compiler identification is AppleClang 9.1.0.9020039
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Error at CMakeLists.txt:27 (message):
AppleClang wasn't supported. Please see
https://github.com/Microsoft/LightGBM/blob/master/docs/Installation-Guide.rst#macos
-- Configuring incomplete, errors occurred!
See also "/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44132e0c9/Microsoft-LightGBM-899151f/R-package/src/build/CMakeFiles/CMakeOutput.log".
make: *** No rule to make target `_lightgbm'. Stop.
Error in eval(ei, envir) : Cannot find lib_lightgbm.so
* removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/lightgbm’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/lightgbm’
Installation failed: run(bin, args = real_cmdargs, stdout_line_callback = real_callback(stdout), stderr_line_callback = real_callback(stderr), stdout_callback = real_block_callback, stderr_callback = real_block_callback, echo_cmd = echo, echo = show, spinner = spinner, error_on_status = fail_on_status, timeout = timeout) : System command error
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Installing pkgbuild
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44071f192/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc454d39a7c/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc47bb2f70/r-lib-pkgbuild-0457039 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘pkgbuild’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (pkgbuild)
Downloading GitHub repo r-lib/pkgload@master
from URL https://api.github.com/repos/r-lib/pkgload/zipball/master
Installing pkgload
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4248d5442/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4531b3ec8/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Installing pkgbuild
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Skipping rlang, it is already being installed.
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Skipping withr, it is already being installed.
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc47e459a7d/r-lib-pkgbuild-0457039 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘pkgbuild’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (pkgbuild)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc462a4bacb/r-lib-pkgload-35efedd \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘pkgload’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c unlock.c -o unlock.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pkgload.so unlock.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/pkgload/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (pkgload)
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/pkgbuild@master
from URL https://api.github.com/repos/r-lib/pkgbuild/zipball/master
Skipping pkgbuild, it is already being installed.
Downloading GitHub repo ropensci/plotly@master
from URL https://api.github.com/repos/ropensci/plotly/zipball/master
Installing plotly
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc45cf14f61/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo hadley/scales@master
from URL https://api.github.com/repos/hadley/scales/zipball/master
Installing scales
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4595df20d/hadley-scales-d767915 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘scales’ ...
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c colors.cpp -o colors.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scales.so RcppExports.o colors.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/scales/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
Loading required package: scales
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (scales)
Downloading GitHub repo tidyverse/ggplot2@master
from URL https://api.github.com/repos/tidyverse/ggplot2/zipball/master
Installing ggplot2
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Skipping rlang, it is already being installed.
Downloading GitHub repo hadley/scales@master
from URL https://api.github.com/repos/hadley/scales/zipball/master
Skipping scales, it is already being installed.
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc41793bed3/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc41d5d447/tidyverse-ggplot2-a6b77c9 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘ggplot2’ ...
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ggplot2)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc42eae054c/ropensci-plotly-efe5535 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘plotly’ ...
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (plotly)
Using GitHub PAT from envvar GITHUB_PAT
Downloading GitHub repo tidyverse/ggplot2@master
from URL https://api.github.com/repos/tidyverse/ggplot2/zipball/master
Skipping ggplot2, it is already being installed.
Downloading GitHub repo airbnb/Rbnb@master
from URL https://xxxxxxxx/api/v3/repos/airbnb/Rbnb/zipball/master
Installation failed: stop(github_error(request)) : Must authenticate to access this API. (401)
Downloading GitHub repo r-lib/rcmdcheck@master
from URL https://api.github.com/repos/r-lib/rcmdcheck/zipball/master
Installing rcmdcheck
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc46c25b5de/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4614416d5/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc4cccd7d3/r-lib-rcmdcheck-ad42561 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rcmdcheck’ ...
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (rcmdcheck)
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc44ad9d3fe/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Downloading GitHub repo hadley/scales@master
from URL https://api.github.com/repos/hadley/scales/zipball/master
Installing scales
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc46ca7044d/hadley-scales-d767915 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘scales’ ...
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c colors.cpp -o colors.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scales.so RcppExports.o colors.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/scales/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
Loading required package: scales
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (scales)
Downloading GitHub repo jeremystan/tidyjson@master
from URL https://api.github.com/repos/jeremystan/tidyjson/zipball/master
Installing tidyjson
Downloading GitHub repo r-lib/rlang@master
from URL https://api.github.com/repos/r-lib/rlang/zipball/master
Installing rlang
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc42d809b93/r-lib-rlang-ccdbd8b \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘rlang’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.5/Resources/library/rlang/libs
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (rlang)
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc411832818/jeremystan-tidyjson-68887e1 \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘tidyjson’ ...
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tidyjson)
Downloading GitHub repo jimhester/withr@master
from URL https://api.github.com/repos/jimhester/withr/zipball/master
Installing withr
Running /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL \
/private/var/folders/8l/jndwfjjn32l1w46xhjs7j4y80000gn/T/Rtmp59jz9R/devtoolscfc438d1cf20/r-lib-withr-79d7b0d \
'--library=/Library/Frameworks/R.framework/Versions/3.5/Resources/library' \
--install-tests
* installing *source* package ‘withr’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (withr)
Warning message:
GitHub repo contains submodules, may not function as expected!
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