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Output of "python setup.py -v nosetests" for https://github.com/dudektria/pnictogen
running nosetests
running egg_info
writing requirements to pnictogen.egg-info/requires.txt
writing pnictogen.egg-info/PKG-INFO
writing top-level names to pnictogen.egg-info/top_level.txt
writing dependency_links to pnictogen.egg-info/dependency_links.txt
writing entry points to pnictogen.egg-info/entry_points.txt
reading manifest file 'pnictogen.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pnictogen.egg-info/SOURCES.txt'
Initial conformer count: 3
30000 attempts, 29998 duplicates, 0 failed filter.
0
1
2
=====> Starting conformers search with a Genetic Algorithm <=====
Perform elitist generation replacement with mutation only
Mutation probability: 0.2
Will stop after 25 generations without improvement.
Generation #1 1.24117
Generation #2 1.24117
Generation #3 1.24117
Generation #4 1.24117
Generation #5 1.24117
Generation #6 1.24117
Generation #7 1.24117
Generation #8 1.24117
Generation #9 1.24117
Generation #10 1.24117
Generation #11 1.24117
Generation #12 1.24117
Generation #13 1.24117
Generation #14 1.24117
Generation #15 1.24117
Generation #16 1.24117
Generation #17 1.24117
Generation #18 1.24117
Generation #19 1.24117
Generation #20 1.24117
Generation #21 1.24117
Generation #22 1.24117
Generation #23 1.24117
Generation #24 1.24117
Generation #25 1.24117
Generation #26 1.24117
2
1
0
GetConformers:
2
1
0
Initial conformer count: 7
30000 attempts, 27195 duplicates, 2799 failed filter.
0 0
0 2
1 2
2 2
2 0
2 1
1 1
=====> Starting conformers search with a Genetic Algorithm <=====
Perform elitist generation replacement with mutation only
Mutation probability: 0.2
Will stop after 25 generations without improvement.
Generation #1 1.23085
Generation #2 1.23085
Generation #3 1.23085
Generation #4 1.23085
Generation #5 1.23085
Generation #6 1.23085
Generation #7 1.23085
Generation #8 1.23085
Generation #9 1.23085
Generation #10 1.23085
Generation #11 1.23085
Generation #12 1.23085
Generation #13 1.23085
Generation #14 1.23085
Generation #15 1.23085
Generation #16 1.23085
Generation #17 1.23085
Generation #18 1.23085
Generation #19 1.23085
Generation #20 1.23085
Generation #21 1.23085
Generation #22 1.23085
Generation #23 1.23085
Generation #24 1.23085
Generation #25 1.23085
Generation #26 1.23085
1 1
0 0
2 2
1 2
0 2
2 1
2 0
GetConformers:
1 1
0 0
2 2
1 2
0 2
2 1
2 0
Initial conformer count: 15
30000 attempts, 26747 duplicates, 3239 failed filter.
0 0 0
2 0 0
2 1 0
2 2 0
2 2 1
2 2 2
2 0 2
0 0 2
2 1 2
0 2 2
1 2 2
0 2 0
2 1 1
1 1 2
1 2 1
=====> Starting conformers search with a Genetic Algorithm <=====
Perform elitist generation replacement with mutation only
Mutation probability: 0.2
Will stop after 25 generations without improvement.
Generation #1 1.19569
Generation #2 1.19569
Generation #3 1.19569
Generation #4 1.19569
Generation #5 1.19569
Generation #6 1.19569
Generation #7 1.19569
Generation #8 1.19569
Generation #9 1.19569
Generation #10 1.19569
Generation #11 1.19569
Generation #12 1.19569
Generation #13 1.19569
Generation #14 1.19569
Generation #15 1.19569
Generation #16 1.19569
Generation #17 1.19569
Generation #18 1.19569
Generation #19 1.19569
Generation #20 1.19569
Generation #21 1.19569
Generation #22 1.19569
Generation #23 1.19569
Generation #24 1.19569
Generation #25 1.19569
Generation #26 1.19569
1 1 1
0 0 0
2 2 2
1 2 1
0 0 2
1 1 2
0 2 0
0 2 2
1 2 2
2 0 0
2 1 1
2 0 1
2 1 0
2 2 0
2 2 1
2 0 2
2 1 2
GetConformers:
1 1 1
0 0 0
2 2 2
1 2 1
0 0 2
1 1 2
0 2 0
0 2 2
1 2 2
2 0 0
2 1 1
2 0 1
2 1 0
2 2 0
2 2 1
2 0 2
2 1 2
Initial conformer count: 30
521 attempts, 358 duplicates, 134 failed filter.
0 0 0 0
0 2 0 1
0 2 0 2
2 1 0 2
2 1 0 1
2 2 0 1
1 2 1 1
1 2 2 1
1 2 1 0
2 0 1 0
2 2 1 0
2 2 1 1
0 2 2 1
2 1 2 1
2 1 2 2
1 1 2 2
1 1 1 2
2 1 1 2
2 2 2 1
2 0 1 2
2 1 1 1
1 2 2 2
2 2 0 0
2 0 0 0
2 2 1 2
1 2 1 2
1 1 2 1
1 2 2 0
2 0 2 0
0 2 0 0
=====> Starting conformers search with a Genetic Algorithm <=====
Perform elitist generation replacement with mutation only
Mutation probability: 0.2
Will stop after 25 generations without improvement.
Generation #1 1.1611
Generation #2 1.1611
Generation #3 1.1611
Generation #4 1.1611
Generation #5 1.1611
Generation #6 1.1611
Generation #7 1.1611
Generation #8 1.1611
Generation #9 1.1611
Generation #10 1.1611
Generation #11 1.1611
Generation #12 1.1611
Generation #13 1.1611
Generation #14 1.1611
Generation #15 1.1611
Generation #16 1.1611
Generation #17 1.1611
Generation #18 1.1611
Generation #19 1.1611
Generation #20 1.1611
Generation #21 1.1611
Generation #22 1.1611
Generation #23 1.1611
Generation #24 1.1611
Generation #25 1.1611
Generation #26 1.1611
1 1 1 1
0 0 0 0
2 0 0 0
0 2 0 0
2 1 1 1
1 2 1 1
2 2 0 1
2 2 1 0
2 2 2 2
1 1 1 2
2 0 1 0
0 2 0 1
1 1 2 1
1 2 1 0
0 0 2 0
0 0 0 2
2 1 0 1
2 2 1 1
2 2 0 0
2 0 2 0
0 2 0 2
1 1 2 2
1 2 1 2
0 0 2 2
2 1 2 1
2 0 1 2
2 1 0 2
0 2 2 1
1 2 2 0
2 2 1 2
GetConformers:
1 1 1 1
0 0 0 0
2 0 0 0
0 2 0 0
2 1 1 1
1 2 1 1
2 2 0 1
2 2 1 0
2 2 2 2
1 1 1 2
2 0 1 0
0 2 0 1
1 1 2 1
1 2 1 0
0 0 2 0
0 0 0 2
2 1 0 1
2 2 1 1
2 2 0 0
2 0 2 0
0 2 0 2
1 1 2 2
1 2 1 2
0 0 2 2
2 1 2 1
2 0 1 2
2 1 0 2
0 2 2 1
1 2 2 0
2 2 1 2
Initial conformer count: 7
30000 attempts, 27140 duplicates, 2854 failed filter.
0 0
0 2
1 2
2 2
2 0
2 1
1 1
=====> Starting conformers search with a Genetic Algorithm <=====
Perform elitist generation replacement with mutation only
Mutation probability: 0.2
Will stop after 25 generations without improvement.
Generation #1 1.23379
Generation #2 1.23379
Generation #3 1.23379
Generation #4 1.23379
Generation #5 1.23379
Generation #6 1.23379
Generation #7 1.23379
Generation #8 1.23379
Generation #9 1.23379
Generation #10 1.23379
Generation #11 1.23379
Generation #12 1.23379
Generation #13 1.23379
Generation #14 1.23379
Generation #15 1.23379
Generation #16 1.23379
Generation #17 1.23379
Generation #18 1.23379
Generation #19 1.23379
Generation #20 1.23379
Generation #21 1.23379
Generation #22 1.23379
Generation #23 1.23379
Generation #24 1.23379
Generation #25 1.23379
Generation #26 1.23379
1 1
0 0
2 2
0 2
1 2
2 0
2 1
GetConformers:
1 1
0 0
2 2
0 2
1 2
2 0
2 1
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