sciunto

#!/usr/bin/env python
# coding: utf-8


import numpy as np
from scipy import constants, optimize
import matplotlib.pyplot as plt


plt.rcParams.update({'figure.autolayout': True})

sciunto

import numpy as np
import dash
from dash.dependencies import Input, Output, State
import dash_html_components as html
import dash_core_components as dcc

from skimage import io, transform, filters, segmentation
from skimage import img_as_ubyte
from scipy import ndimage
import plotly.express as px

sciunto

#!/usr/bin/env python
from github import Github
import datetime

def print_list(l, title=None):
    """From list of PullRequest of Issue objects,
    print their number and title.
    """
    print(f'## {title}\n')
    if not l:

sciunto

def canny(image, sigma=1., low_threshold=None, high_threshold=None, mask=None,
          use_quantiles=False):
    """Edge filter an image using the Canny algorithm.
    Parameters
    -----------
    image : 2D array
        Grayscale input image to detect edges on; can be of any dtype.
    sigma : float, optional
        Standard deviation of the Gaussian filter.

sciunto

#!/usr/bin/env python



import imageio
print('imageio version ', imageio.__version__)
import cv2
print('cv2 version ', cv2.__version__)
import skimage
print('skimage version ', skimage.__version__)

sciunto

#!/usr/bin/env python
import imageio
print('imageio version ', imageio.__version__)
import cv2
print('cv2 version ', cv2.__version__)
import skimage
print('skimage version ', skimage.__version__)


from skimage import data

sciunto

$ pip install scipy --no-cache-dir -vv


You are using pip version 7.0.0, however version 8.0.2 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
Collecting scipy
  Getting page https://pypi.python.org/simple/scipy/

sciunto

$ pew mktmpenv

Using base prefix '/usr'
New python executable in /home/fr/.local/share/virtualenvs/ae24edb11eebdba/bin/python3
Also creating executable in /home/fr/.local/share/virtualenvs/ae24edb11eebdba/bin/python
Installing setuptools, pip, wheel...pip install pip==7.done.
This is a temporary environment. It will be deleted when you exit
0.0Launching subshell in virtual environment. Type 'exit' or 'Ctrl+D' to return.

sciunto

[fr:~] % pew mktmpenv 
Using base prefix '/usr'
New python executable in /home/fr/.local/share/virtualenvs/576dc9ecac1d233/bin/python3
Also creating executable in /home/fr/.local/share/virtualenvs/576dc9ecac1d233/bin/python
Installing setuptools, pip, wheel...done.
This is a temporary environment. It will be deleted when you exit
Launching subshell in virtual environment. Type 'exit' or 'Ctrl+D' to return.
[fr:~] [576dc9ecac1d233] % pip install numpy==1.10.2 --no-cache-dir -v
Collecting numpy==1.10.2