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@scopatz
Created April 2, 2015 15:54
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cyclus vs cymetric build
scopatz@athenaie ~/cyclus develop $ ./install.py --build_type=Debug -j3
/home/scopatz/miniconda3/bin/cmake
-- The C compiler identification is GNU 4.9.1
-- The CXX compiler identification is GNU 4.9.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
Debug
-- Not Found Tcmalloc: Tcmalloc_LIBRARY-NOTFOUND
-- Found LibXml2: /home/scopatz/miniconda3/lib/libxml2.so (found version "2.9.0")
-- checking for module 'glib-2.0'
-- package 'glib-2.0' not found
-- Found glib-2.0: /home/scopatz/miniconda3/include/glib-2.0, /home/scopatz/miniconda3/lib/libglib-2.0.so
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.28")
-- checking for module 'sigc++-2.0'
-- package 'sigc++-2.0' not found
-- Found SigC++
-- checking for module 'glibmm-2.4'
-- package 'glibmm-2.4' not found
-- Found Glibmm
-- checking for module 'libxml++-2.6'
-- package 'libxml++-2.6' not found
-- Found LibXML++
/home/scopatz/miniconda3/lib/libxml2.so/home/scopatz/miniconda3/lib/libxml++-2.6.so/home/scopatz/miniconda3/lib/libxml2.so/home/scopatz/miniconda3/lib/libglibmm-2.4.so/home/scopatz/miniconda3/lib/libglib-2.0.so/home/scopatz/miniconda3/lib/libsigc-2.0.so
-- Found Sqlite3 header file in /home/scopatz/miniconda3/include
-- Found Sqlite3 libraries: optimized;/home/scopatz/miniconda3/lib/libsqlite3.so;debug;/home/scopatz/miniconda3/lib/libsqlite3.so
-- Found HDF5: debug;/home/scopatz/miniconda3/lib/libhdf5_hl.so;/home/scopatz/miniconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/scopatz/miniconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/home/scopatz/miniconda3/lib/libm.so;optimized;/home/scopatz/miniconda3/lib/libhdf5_hl.so;/home/scopatz/miniconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/scopatz/miniconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/home/scopatz/miniconda3/lib/libm.so
-- Boost version: 1.50.0
-- Found the following Boost libraries:
-- program_options
-- filesystem
-- system
-- serialization
-- Boost Root:
-- Boost Include directory: /home/scopatz/miniconda3/include
-- Boost Library directories: /home/scopatz/miniconda3/lib
-- Boost Program Options location: /home/scopatz/miniconda3/lib/libboost_program_options.so
-- Boost System location: /home/scopatz/miniconda3/lib/libboost_system.so
-- Boost Filesystem location: /home/scopatz/miniconda3/lib/libboost_filesystem.so
-- Boost Serialization location: /home/scopatz/miniconda3/lib/libboost_serialization.so
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- A library with BLAS API found.
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
Found LAPACK Libraries: /usr/lib/liblapack.so.3gf;/usr/lib/libblas.so
COIN Root Dir:
-- COIN_ROOT_DIR hint is :
-- Coin multiple library dependency status:
COIN Include Dir: /home/scopatz/miniconda3/include/coin
COIN CBC: /home/scopatz/miniconda3/lib/libCbc.so
COIN CBC solver: /home/scopatz/miniconda3/lib/libCbcSolver.so
COIN CGL: /home/scopatz/miniconda3/lib/libCgl.so
COIN CLP: /home/scopatz/miniconda3/lib/libClp.so
COIN UTILS: /home/scopatz/miniconda3/lib/libCoinUtils.so
COIN OSI: /home/scopatz/miniconda3/lib/libOsi.so
COIN OSI CLP: /home/scopatz/miniconda3/lib/libOsiClp.so
COIN ZLIB: /usr/lib/x86_64-linux-gnu/libz.so
COIN BZ2: /home/scopatz/miniconda3/lib/libbz2.a
-- Found COIN: /home/scopatz/miniconda3/include/coin
-- Found COIN Include Dirs: /home/scopatz/miniconda3/include/coin
-- Found '/home/scopatz/cyclus/share/cyclus_nuc_data.h5'
-- Starting construction of build files for agent: test_agent
scopatz@athenaie ~/cymetric master $ ./setup.py install --user
Generating API Bindings...
Downloading http://fuelcycle.org/arche/dbtypes.js ...
/home/scopatz/miniconda3/bin/cmake
CMake command is
cmake .. -DPYTHON_EXECUTABLE=/home/scopatz/miniconda3/bin/python
-- The C compiler identification is GNU 4.9.1
-- The CXX compiler identification is GNU 4.9.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Cymetric platform defined as: __LINUX__
__________________________________________________________
| ____ __ __ __ __ _____ _____ ____ ___ ____ |
/ | |___ \ \ \ / /| \/ ||____ ||_ _| / _ ||_ _||___ \ |
/---, | | | \ V / | |\/| | |_ | | | | (_| | | | | | |
-----# ==| | ___| | | | | | | | ___| | | | > _ | | | ___| | |
| :) # ==| | |____/ |_| |_| |_||_____| |_| /_/ |_||___||____/ |
-----'----# | |_________________________________________________________|
|)___() '# |______====____ \___________________________________|
[_/,-,\"--"------ //,-, ,-,\\\ |/ //,-, ,-, ,-,\\ __#
( 0 )|===******||( 0 )( 0 )||- o '( 0 )( 0 )( 0 )||
----'-'--------------'-'--'-'-----------------------'-'--'-'--'-'--------------
-- Build type: Release
-- Found PythonInterp: /home/scopatz/miniconda3/bin/python (found version "3.4.3")
-- Found PythonLibs: /home/scopatz/miniconda3/lib/libpython3.4m.so
-- PYTHON_EXECUTABLE: /home/scopatz/miniconda3/bin/python
-- Found Cython: /home/scopatz/miniconda3/bin/cython
-- Cython Version: Cython version 0.21.2
-- Found LibXml2: /home/scopatz/miniconda3/lib/libxml2.so (found version "2.9.0")
-- checking for module 'glib-2.0'
-- package 'glib-2.0' not found
-- Found glib-2.0: /home/scopatz/miniconda3/include/glib-2.0, /home/scopatz/miniconda3/lib/libglib-2.0.so
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.28")
-- checking for module 'sigc++-2.0'
-- package 'sigc++-2.0' not found
-- Found SigC++
-- checking for module 'glibmm-2.4'
-- package 'glibmm-2.4' not found
-- Found Glibmm
-- checking for module 'libxml++-2.6'
-- package 'libxml++-2.6' not found
-- Found LibXML++
-- Boost version: 1.50.0
-- Found the following Boost libraries:
-- filesystem
-- system
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- A library with BLAS API found.
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
Found LAPACK Libraries: /usr/lib/liblapack.so.3gf;/usr/lib/libblas.so
-- Found HDF5: debug;/home/scopatz/miniconda3/lib/libhdf5_hl.so;/home/scopatz/miniconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/scopatz/miniconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/home/scopatz/miniconda3/lib/libm.so;optimized;/home/scopatz/miniconda3/lib/libhdf5_hl.so;/home/scopatz/miniconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/scopatz/miniconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/home/scopatz/miniconda3/lib/libm.so
-- NUMPY_VERSION_STRING = 1.9.2
-- Found Numpy: 1.9.2
COIN Root Dir:
-- COIN_ROOT_DIR hint is :
-- Coin multiple library dependency status:
COIN Include Dir: /home/scopatz/miniconda3/include/coin
COIN CBC: /home/scopatz/miniconda3/lib/libCbc.so
COIN CBC solver: /home/scopatz/miniconda3/lib/libCbcSolver.so
COIN CGL: /home/scopatz/miniconda3/lib/libCgl.so
COIN CLP: /home/scopatz/miniconda3/lib/libClp.so
COIN UTILS: /home/scopatz/miniconda3/lib/libCoinUtils.so
COIN OSI: /home/scopatz/miniconda3/lib/libOsi.so
COIN OSI CLP: /home/scopatz/miniconda3/lib/libOsiClp.so
COIN ZLIB: /usr/lib/x86_64-linux-gnu/libz.so
COIN BZ2: /home/scopatz/miniconda3/lib/libbz2.a
-- Found COIN: /home/scopatz/miniconda3/include/coin
-- Found COIN Include Dirs: /home/scopatz/miniconda3/include/coin
-- Using /home/scopatz/.local as CYCLUS_ROOT_DIR.
-- Found Cyclus Core Headers : /home/scopatz/.local/include/cyclus
-- Found Cyclus Core Test Headers : /home/scopatz/.local/include/cyclus
-- Found Cyclus Core Shared Data : /home/scopatz/.local/share/cyclus
-- Found Cyclus Core Library : /home/scopatz/.local/lib/libcyclus.so
-- Found Cyclus Test Libraries : /home/scopatz/.local/lib/libgtest.so/home/scopatz/.local/lib/cyclus/libbaseagentunittests.so
-- CMake Install Prefix: /usr/local
-- RPATH: $ORIGIN/lib
-- Include paths for /home/scopatz/cymetric/cymetric: /home/scopatz/miniconda3/lib/python3.4/site-packages/numpy/core/include;/home/scopatz/miniconda3/include;/home/scopatz/miniconda3/include/libxml++-2.6;/home/scopatz/miniconda3/include/glibmm-2.4;/home/scopatz/miniconda3/lib/glibmm-2.4/include;/home/scopatz/miniconda3/include/glib-2.0;/home/scopatz/miniconda3/lib/glib-2.0/include;/home/scopatz/miniconda3/include/sigc++-2.0;/home/scopatz/miniconda3/lib/sigc++-2.0/include;/home/scopatz/miniconda3/lib/libxml++-2.6/include;/home/scopatz/miniconda3/include;/home/scopatz/miniconda3/include/coin;/home/scopatz/.local/include/cyclus
-- Include paths for /home/scopatz/cymetric: /home/scopatz/miniconda3/lib/python3.4/site-packages/numpy/core/include;/home/scopatz/miniconda3/include;/home/scopatz/miniconda3/include/libxml++-2.6;/home/scopatz/miniconda3/include/glibmm-2.4;/home/scopatz/miniconda3/lib/glibmm-2.4/include;/home/scopatz/miniconda3/include/glib-2.0;/home/scopatz/miniconda3/lib/glib-2.0/include;/home/scopatz/miniconda3/include/sigc++-2.0;/home/scopatz/miniconda3/lib/sigc++-2.0/include;/home/scopatz/miniconda3/lib/libxml++-2.6/include;/home/scopatz/miniconda3/include;/home/scopatz/miniconda3/include/coin;/home/scopatz/.local/include/cyclus
-- Copying C/C++ header files.
-- Copying Cython header files.
-- Copying scripts.
-- Configuring done
CMake Warning at cmake/FindPythonLibsNew.cmake:204 (ADD_LIBRARY):
Cannot generate a safe runtime search path for target cyclus because files
in some directories may conflict with libraries in implicit directories:
runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in:
/home/scopatz/miniconda3/lib
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
cmake/UseCython.cmake:245 (python_add_module)
cymetric/CMakeLists.txt:21 (cython_add_module)
CMake Warning at cmake/FindPythonLibsNew.cmake:204 (ADD_LIBRARY):
Cannot generate a safe runtime search path for target typesystem because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in:
/home/scopatz/miniconda3/lib
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
cmake/UseCython.cmake:245 (python_add_module)
cymetric/CMakeLists.txt:13 (cython_add_module)
-- Generating done
-- Build files have been written to: /home/scopatz/cymetric/build
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