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scottcain/gist:1030072

Created June 16, 2011 19:43
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bioperl build fail on Ubuntu/AWS
Raw
gistfile1.txt
unpacking...
BioPerl-1.6.901/t/Variation/SNP.t
BioPerl-1.6.901/t/Variation/Variation_IO.t
Use of uninitialized value $_[0] in join or string at /usr/lib/perl5/File/Spec/Unix.pm line 86.
Use of uninitialized value $path in pattern match (m//) at /usr/lib/perl5/File/Spec/Unix.pm line 267
...repeats many times (100s)....
CPAN: Time::HiRes loaded ok (v1.9719)
CPAN.pm: Going to build C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz
Warning: No success on command[/usr/bin/perl Build.PL --installdirs site]
CJFIELDS/BioPerl-1.6.901.tar.gz
/usr/bin/perl Build.PL --installdirs site -- NOT OK
Running Build test
Make had some problems, won't test
Running Build install
Make had some problems, won't install
CPAN: Module::Build loaded ok (v0.38)
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