Created
June 16, 2011 20:22
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cpan install of bioperl weirdness
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| Use of uninitialized value $path in pattern match (m//) at /usr/local/lib/perl/5.10.1/File/Spec/Unix.pm line 267 | |
| File::Spec::Unix::splitpath('File::Spec', undef) called at /usr/share/perl/5.10/Archive/Tar.pm line 706 | |
| Archive::Tar::_extract_file('Archive::Tar=HASH(0xdd6a498)', 'Archive::Tar::File=HASH(0xdea0b28)') called at /usr/share/perl/5.10/Archive/Tar.pm line 571 | |
| Archive::Tar::extract('Archive::Tar=HASH(0xdd6a498)', 'BioPerl-1.6.901', 'BioPerl-1.6.901/AUTHORS', 'BioPerl-1.6.901/BioPerl.pm', 'BioPerl-1.6.901/BUGS', 'BioPerl-1.6.901/Build.PL', 'BioPerl-1.6.901/Changes', 'BioPerl-1.6.901/DEPENDENCIES', 'BioPerl-1.6.901/DEPRECATED', ...) called at /usr/share/perl/5.10/CPAN/Tarzip.pm line 351 | |
| CPAN::Tarzip::untar('CPAN::Tarzip=HASH(0xdae3e48)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1095 | |
| eval {...} called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1095 | |
| CPAN::Distribution::untar_me('CPAN::Distribution=HASH(0xda0dc90)', 'CPAN::Tarzip=HASH(0xdae3e48)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 446 | |
| CPAN::Distribution::run_preps_on_packagedir('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 347 | |
| CPAN::Distribution::get('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1677 | |
| CPAN::Distribution::make('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 2876 | |
| CPAN::Distribution::test('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 3266 | |
| CPAN::Distribution::install('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Module.pm line 474 | |
| eval {...} called at /usr/share/perl/5.10/CPAN/Module.pm line 473 | |
| CPAN::Module::rematein('CPAN::Module=HASH(0xccc8e68)', 'install') called at /usr/share/perl/5.10/CPAN/Module.pm line 576 | |
| CPAN::Module::install('CPAN::Module=HASH(0xccc8e68)') called at /usr/share/perl/5.10/CPAN/Shell.pm line 1755 | |
| CPAN::Shell::rematein('CPAN::Shell', 'install', 'Bio::Perl') called at /usr/share/perl/5.10/CPAN/Shell.pm line 1935 | |
| CPAN::Shell::__ANON__('CPAN::Shell', 'Bio::Perl') called at /usr/share/perl/5.10/CPAN.pm line 375 | |
| eval {...} called at /usr/share/perl/5.10/CPAN.pm line 372 | |
| CPAN::shell() called at -e line 1 | |
| Use of uninitialized value $_[0] in join or string at /usr/local/lib/perl/5.10.1/File/Spec/Unix.pm line 86 | |
| File::Spec::Unix::catdir('File::Spec', undef, 'BioPerl-1.6.901') called at /usr/share/perl/5.10/Archive/Tar.pm line 677 | |
| Archive::Tar::_extract_file('Archive::Tar=HASH(0xdd6a498)', 'Archive::Tar::File=HASH(0xdea0a98)') called at /usr/share/perl/5.10/Archive/Tar.pm line 571 | |
| Archive::Tar::extract('Archive::Tar=HASH(0xdd6a498)', 'BioPerl-1.6.901', 'BioPerl-1.6.901/AUTHORS', 'BioPerl-1.6.901/BioPerl.pm', 'BioPerl-1.6.901/BUGS', 'BioPerl-1.6.901/Build.PL', 'BioPerl-1.6.901/Changes', 'BioPerl-1.6.901/DEPENDENCIES', 'BioPerl-1.6.901/DEPRECATED', ...) called at /usr/share/perl/5.10/CPAN/Tarzip.pm line 351 | |
| CPAN::Tarzip::untar('CPAN::Tarzip=HASH(0xdae3e48)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1095 | |
| eval {...} called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1095 | |
| CPAN::Distribution::untar_me('CPAN::Distribution=HASH(0xda0dc90)', 'CPAN::Tarzip=HASH(0xdae3e48)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 446 | |
| CPAN::Distribution::run_preps_on_packagedir('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 347 | |
| CPAN::Distribution::get('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 1677 | |
| CPAN::Distribution::make('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 2876 | |
| CPAN::Distribution::test('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Distribution.pm line 3266 | |
| CPAN::Distribution::install('CPAN::Distribution=HASH(0xda0dc90)') called at /usr/share/perl/5.10/CPAN/Module.pm line 474 | |
| eval {...} called at /usr/share/perl/5.10/CPAN/Module.pm line 473 | |
| CPAN::Module::rematein('CPAN::Module=HASH(0xccc8e68)', 'install') called at /usr/share/perl/5.10/CPAN/Module.pm line 576 | |
| CPAN::Module::install('CPAN::Module=HASH(0xccc8e68)') called at /usr/share/perl/5.10/CPAN/Shell.pm line 1755 | |
| CPAN::Shell::rematein('CPAN::Shell', 'install', 'Bio::Perl') called at /usr/share/perl/5.10/CPAN/Shell.pm line 1935 | |
| CPAN::Shell::__ANON__('CPAN::Shell', 'Bio::Perl') called at /usr/share/perl/5.10/CPAN.pm line 375 | |
| eval {...} called at /usr/share/perl/5.10/CPAN.pm line 372 | |
| CPAN::shell() called at -e line 1 |
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