Created
July 1, 2021 20:03
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{ | |
"label" : "SpCas9 NGG PAM sites", | |
"unsafeMouseover" : true, | |
"unsafePopup" : true, | |
"type":"CanvasFeatures", | |
"category" : "CRISPR_Cas9 sgRNA predictions", | |
"key" : "SpCas9 NGG PAM sites", | |
"style" : { | |
"color" : "RebeccaPurple", | |
"height" : 5 | |
}, | |
"metadata" : { | |
"shortInfo" : "Streptococcus pyogenes Cas9 PAM sites based on NGG motif. Computed on the fly at load time." | |
}, | |
"storeClass" : "RegexSequenceSearch/Store/SeqFeature/RegexSearch", | |
"searchParams" :{"expr":".GG","regex":true,"caseIgnore":true,"fwdStrand":true,"revStrand":true} | |
}, | |
{ | |
"label" : "SaCas9 NNGRRT PAM sites", | |
"unsafeMouseover" : true, | |
"unsafePopup" : true, | |
"type":"CanvasFeatures", | |
"category" : "CRISPR_Cas9 sgRNA predictions", | |
"key" : "SaCas9 NNGRRT PAM sites", | |
"style" : { | |
"color" : "DarkViolet", | |
"height" : 5 | |
}, | |
"metadata" : { | |
"shortInfo" : "Staphylococcus aureus Cas9 PAM sites based on NNGRRT motif. Computed on the fly at load time." | |
}, | |
"storeClass" : "RegexSequenceSearch/Store/SeqFeature/RegexSearch", | |
"searchParams" :{"expr":"..G[AG][AG]T","regex":true,"caseIgnore":true,"fwdStrand":true,"revStrand":true} | |
}, | |
{ | |
"label" : "Cas12a TTN PAM sites", | |
"unsafeMouseover" : true, | |
"unsafePopup" : true, | |
"type":"CanvasFeatures", | |
"category" : "CRISPR_Cas9 sgRNA predictions", | |
"key" : "Cas12a TTN PAM sites", | |
"style" : { | |
"color" : "Indigo", | |
"height" : 5 | |
}, | |
"metadata" : { | |
"shortInfo" : "Cas12a (Cpf1) PAM sites based on TTN motif. Computed on the fly at load time." | |
}, | |
"storeClass" : "RegexSequenceSearch/Store/SeqFeature/RegexSearch", | |
"searchParams" :{"expr":"TT.","regex":true,"caseIgnore":true,"fwdStrand":true,"revStrand":true} | |
}, | |
{ | |
"label" : "Cas12e TTCN PAM sites", | |
"unsafeMouseover" : true, | |
"unsafePopup" : true, | |
"type":"CanvasFeatures", | |
"category" : "CRISPR_Cas9 sgRNA predictions", | |
"key" : "Cas12e TTCN PAM sites", | |
"style" : { | |
"color" : "SlateBlue", | |
"height" : 5 | |
}, | |
"metadata" : { | |
"shortInfo" : "Cas12e (CasX) PAM sites based on TTCN motif. Computed on the fly at load time." | |
}, | |
"storeClass" : "RegexSequenceSearch/Store/SeqFeature/RegexSearch", | |
"searchParams" :{"expr":"TTC.","regex":true,"caseIgnore":true,"fwdStrand":true,"revStrand":true} | |
}, |
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