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sestaton/fmtDetailValue_Ontology_term.js

Created May 12, 2016 20:58
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create GO term links for jbrowse
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fmtDetailValue_Ontology_term.js
fmtDetailValue_Ontology_term : function(goterm) {
if (typeof goterm != 'string') {
return goterm;
}
var dbid = goterm.split(':');
var prefix = '';
switch (dbid[0]) {
case 'GO':
prefix = 'http://amigo.geneontology.org/amigo/medial_search?q=GO:';
break;
default:
return goterm;
};
return '<a href=\"'+ prefix + dbid[1] + '\">' + goterm + '</a>';
}
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minified for trackList.json:

"fmtDetailValue_Ontology_term" : "function(goterm) { if (typeof goterm != 'string') { return goterm; } var dbid = goterm.split(':'); var prefix = ''; switch (dbid[0]) { case 'GO': prefix = 'http://amigo.geneontology.org/amigo/medial_search?q=GO:'; break; default: return goterm; }; return '<a href=\"'+ prefix + dbid[1] + '\">' + goterm + '</a>'; }"

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