RefEx RDF tentative

RFX0019827610.ttl

@prefix rdf:     <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl:     <http://www.w3.org/2002/07/owl#> .
@prefix sio:     <http://semanticscience.org/resource/> .
@prefix xsd:     <http://www.w3.org/2001/XMLSchema#> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix rdfs:    <http://www.w3.org/2000/01/rdf-schema#> .
@prefix refex:   <http://refex.dbcls.jp/entry/> .
@prefix refexs:  <http://refex.dbcls.jp/sample/> .
@prefix refexo:  <http://purl.jp/bio/01/refexo#> .
@prefix obo:     <http://purl.obolibrary.org/obo/> .
@prefix ensembl: <http://rdf.ebi.ac.uk/resource/ensembl/> .
@prefix bs:      <http://rdf.ebi.ac.uk/resource/biosamples/sample/> .
@prefix skos:    <http://www.w3.org/2004/02/skos/core#> .
@prefix tax:     <http://identifiers.org/taxonomy/> .
@prefix schema:  <http://schema.org/> .

refex:RFX0019827610
    a refexo:RefExEntry ;
    rdfs:label "RFX0019827610" ;
    refexo:refexSample refexs:RSE00000948 ;
    dcterms:identifier "RFX0019827610" ;
    sio:SIO_000216
        [ a refexo:logTPMMin ;
          sio:SIO_000300 0.031762 ] ,
        [ a refexo:logTPM1stQu ;
          sio:SIO_000300 0.03318 ] ,
        [ a refexo:logTPMMedian ;
          sio:SIO_000300 0.089454 ] ,
        [ a refexo:logTPMMean ;
          sio:SIO_000300 0.13611 ] ,
        [ a refexo:logTPM3rdQu ;
          sio:SIO_000300 0.13515 ] ,
        [ a refexo:logTPMMax ;
          sio:SIO_000300 0.50792 ] ,
        [ a refexo:logTPMSD ;
          sio:SIO_000300 0.14312 ] ;
    sio:SIO_000421 <http://identifiers.org/ensembl/ENSG00000223972> , ensembl:ENSG00000223972 .

refexs:RSE00000948
    a refexo:RefExSample , sio:SIO_001050 ;
    rdfs:label "RSE00000948" ;
    dcterms:identifier "RSE00000948" ;
    dcterms:description "Adipose - Subcutaneous, female, 20-29 year-olds" ;
    schema:additionalProperty [
        a schema:PropertyValue ;
        schema:name "AlphabeticalUniqOrder" ;
        schema:value 948
    ] , [
        a schema:PropertyValue ;
        schema:name "SampleCategory" ;
        schema:value "tissues"
    ] .

refexs:RSE00000948
    refexo:sampleReference
    [ rdfs:label "GTEX-11EM3-2326-SM-5H12B" ;
      rdfs:seeAlso bs:SAMN02791237, <http://identifiers.org/biosample/SAMN02791237> ] ,
    [ rdfs:label "GTEX-133LE-1926-SM-5N9FV" ;
      rdfs:seeAlso bs:SAMN02789105, <http://identifiers.org/biosample/SAMN02789105> ] ,
    [ rdfs:label "GTEX-13VXT-0226-SM-5LU9Q" ;
      rdfs:seeAlso bs:SAMN02792518, <http://identifiers.org/biosample/SAMN02792518> ] ,
    [ rdfs:label "GTEX-14BMU-2126-SM-5S2TS" ;
      rdfs:seeAlso bs:SAMN02792295, <http://identifiers.org/biosample/SAMN02792295> ] ,
    [ rdfs:label "GTEX-15ER7-0426-SM-6PAM3" ;
      rdfs:seeAlso bs:SAMN04598160, <http://identifiers.org/biosample/SAMN04598160> ] ,
    [ rdfs:label "GTEX-POMQ-2326-SM-5S2VS" ;
      rdfs:seeAlso bs:SAMN02788813, <http://identifiers.org/biosample/SAMN02788813> ] ,
    [ rdfs:label "GTEX-PWCY-1926-SM-3NB25" ;
      rdfs:seeAlso bs:SAMN01993828, <http://identifiers.org/biosample/SAMN01993828> ] ,
    [ rdfs:label "GTEX-PX3G-0226-SM-3NB2C" ;
      rdfs:seeAlso bs:SAMN01994156, <http://identifiers.org/biosample/SAMN01994156> ] ,
    [ rdfs:label "GTEX-T2IS-0226-SM-32QPH" ;
      rdfs:seeAlso bs:SAMN01887467, <http://identifiers.org/biosample/SAMN01887467> ] ,
    [ rdfs:label "GTEX-T5JW-1726-SM-3GADN" ;
      rdfs:seeAlso bs:SAMN01887485, <http://identifiers.org/biosample/SAMN01887485> ] ,
    [ rdfs:label "GTEX-ZP4G-2326-SM-57WEM" ;
      rdfs:seeAlso bs:SAMN02791720, <http://identifiers.org/biosample/SAMN02791720> ] ,
    [ rdfs:label "GTEX-ZTPG-0226-SM-5O99I" ;
      rdfs:seeAlso bs:SAMN02789952, <http://identifiers.org/biosample/SAMN02789952> ] .

RFX0051637942.ttl

@prefix rdf:     <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl:     <http://www.w3.org/2002/07/owl#> .
@prefix sio:     <http://semanticscience.org/resource/> .
@prefix xsd:     <http://www.w3.org/2001/XMLSchema#> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix rdfs:    <http://www.w3.org/2000/01/rdf-schema#> .
@prefix refex:   <http://refex.dbcls.jp/entry/> .
@prefix refexs:  <http://refex.dbcls.jp/sample/> .
@prefix refexo:  <http://purl.jp/bio/01/refexo#> .
@prefix obo:     <http://purl.obolibrary.org/obo/> .
@prefix gene:    <http://www.ncbi.nlm.nih.gov/gene/> .
@prefix bs:      <http://rdf.ebi.ac.uk/resource/biosamples/sample/> .
@prefix skos:    <http://www.w3.org/2004/02/skos/core#> .
@prefix ff:      <http://fantom.gsc.riken.jp/5/sstar/FF:> .
@prefix tax:     <http://identifiers.org/taxonomy/> .
@prefix schema:  <http://schema.org/> .

refex:RFX0051637942
    a refexo:RefExEntry ;
    rdfs:label "RFX0051637942" ;
    refexo:refexSample refexs:RSE00001514 ;
    dcterms:identifier "RFX0051637942" ;
    sio:SIO_000216
        [ a refexo:logTPMMin ;
          sio:SIO_000300 1.6521 ] ,
        [ a refexo:logTPM1stQu ;
          sio:SIO_000300 1.7699 ] ,
        [ a refexo:logTPMMedian ;
          sio:SIO_000300 1.8878 ] ,
        [ a refexo:logTPMMean ;
          sio:SIO_000300 1.826 ] ,
        [ a refexo:logTPM3rdQu ;
          sio:SIO_000300 1.913 ] ,
        [ a refexo:logTPMMax ;
          sio:SIO_000300 1.9383 ] ,
        [ a refexo:logTPMSD ;
          sio:SIO_000300 0.15276 ] ;
    sio:SIO_000421 gene:1 .

refexs:RSE00001514
    a refexo:RefExSample , sio:SIO_001050 ;
    rdfs:label "RSE00001514" ;
    dcterms:identifier "RSE00001514" ;
    dcterms:description "293SLAM rinderpest infection, 00hr" ;
    schema:additionalProperty [
        a schema:PropertyValue ;
        schema:name "originalDescription" ;
        schema:value "TPM (tags per million) of 293SLAM rinderpest infection, 00hr, biol_rep1.CNhs14406.13541-145H4"
    ] , [
        a schema:PropertyValue ;
        schema:name "AlphabeticalUniqOrder" ;
        schema:value 1514
    ] , [
        a schema:PropertyValue ;
        schema:name "SampleCategory" ;
        schema:value "time courses"
    ] .

refexs:RSE00001514
    refexo:sampleReference [
        rdfs:label "FF:13541-145H4" ;
        rdfs:seeAlso ff:13541-145H4 , bs:SAMD00022157 , <http://identifiers.org/biosample/SAMD00022157> ;
        schema:additionalProperty [
            a schema:PropertyValue ;
            schema:name "belongsToDisease" ;
            schema:value
                obo:DOID_0050117 ,
                obo:DOID_4
        ]
    ] , [
        rdfs:label "FF:13542-145H5" ;
        rdfs:seeAlso ff:13542-145H5 , bs:SAMD00022158 , <http://identifiers.org/biosample/SAMD00022158> ;
        schema:additionalProperty [
            a schema:PropertyValue ;
            schema:name "belongsToDisease" ;
            schema:value
                obo:DOID_0050117 ,
                obo:DOID_4
        ]
    ] , [
        rdfs:label "FF:13543-145H6" ;
        rdfs:seeAlso ff:13543-145H6 , bs:SAMD00022159 , <http://identifiers.org/biosample/SAMD00022159> ;
        schema:additionalProperty [
            a schema:PropertyValue ;
            schema:name "belongsToDisease" ;
            schema:value
                obo:DOID_0050117 ,
                obo:DOID_4
        ]
    ] .