Created
March 5, 2019 08:53
-
-
Save shug3502/8bb72b66ac341e5859a9101d9a8b9024 to your computer and use it in GitHub Desktop.
Minimal example to recreate RBi error
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #minimal example to recreate error | |
| library(rbi) | |
| set.seed(123) | |
| model_file <- system.file(package="rbi", "SIR.bi") | |
| SIRmodel <- bi_model(model_file) | |
| SIRdata <- bi_generate_dataset(SIRmodel, end_time=16*7, noutputs=16) | |
| bi <- libbi(SIRmodel) | |
| bi_prior <- sample(bi, target="prior", nsamples=1000, end_time=16*7, noutputs=16) | |
| bi <- sample(bi_prior, target="posterior", nparticles=32, obs=SIRdata, verbose=TRUE) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment