grodins 2013 research

grodins2013.rb

#!/usr/bin/ruby

# the pseudo-journal of biomedical engineering at USC
# Sirish Nandyala
# nandyala@usc.edu

Paper = Struct.new(:title, :year, :cites)

@papers = []
@papers += [Paper.new("Fabrication and performace of endoscopic ultrasound radial arrays based on PMN-PT single crystal/epoxy 1-3 composite", 2011, 4)]
@papers += [Paper.new("Novel Epidural Needle with Embedded High-Frequency Ultrasound Transducer -- Epidural Access in Porcine Model", 2011, 7)]
@papers += [Paper.new("Novel combined minature optical coherence tomography ultrasound probe for in vivo intravascular imaging", 2011, 7)]
@papers += [Paper.new("Oscillatory shear stress induces mitochondrial superoxide production: implication of NADPH oxidase and c-Jun NH2-terminal kinase signaling", 2011, 7)]
@papers += [Paper.new("Muscle redundancy does not imply robustness to muscle dysfunction", 2011, 9)]
@papers += [Paper.new("Gene editing of human embryonic stem celles via an engineering baculoviral vector carrying zinc-finger nucleases", 2011, 10)]
@papers += [Paper.new("Dynamic nonlinear modeling of interactions between neuronal ensembles using principal dynamic modes", 2011, 3)]
@papers += [Paper.new("Parylene-based integrated wireless single-channel neuronstimulator", 2011, 4)]
@papers += [Paper.new("Polystyrene nanoparticle trafficking across MDCK-II", 2011, 7)]
@papers += [Paper.new("Particle manipulation in a microfluidic channel using acoustic trap", 2011, 9)]
@papers += [Paper.new("Microscale 1-3-Type (Na, K) NbO3-Based Pb-Free Piezocomposites for High-Frequency Ultrasonic Transducer Applications", 2011, 6)]
@papers += [Paper.new("Reflection-mode submicron-resolution in vivo photoacoustic microscopy", 2012, 10)]
@papers += [Paper.new("MEMS thermal sensors to detect changes in heat transfer in the pre-atherosclerotic regions of fat-fed New Zealand white rabbits", 2011, 5)]
@papers += [Paper.new("Short history of PACS, Part 1: USA", 2011, 7)]
@papers += [Paper.new("Integrated ultrasound and photoacoustic probe for co-registered intravascular imaging", 2011, 7)]
@papers += [Paper.new("A switching control strategy for the attenuation of blood glucose disturbances", 2011, 3)]
@papers += [Paper.new("Multimodal wide-field two-photon excitaiton imaging: characterizaiton of the technique for in vivo applications", 2011, 7)]
@papers += [Paper.new("Retinal prostheses: current clinical results and future needs", 2011, 22)]
@papers += [Paper.new("Characterization of porcine sclera using instrumented nanoindentation", 2011, 2)]
@papers += [Paper.new("Enhances Real-Time Monitoring of Adeno-Associated Virus Trafficking by Virus-Quantum Dot Conjugates", 2011, 9)]
@papers += [Paper.new("Identification of amyloid plaques in retinas from Alzheimer's patients and noninvasive in vivo optical imaging of retinal plaques in a mouse model", 2011, 31)]
@papers += [Paper.new("Cortical control of reach and grasp kinematics in a virtual environment using musculoskeletal modeling software", 2011, 8)]
@papers += [Paper.new("Electrodeposition and Characterization of Thin-Film Platinum-Iridium Alloys for Biological Interfaces", 2011, 7)]
@papers += [Paper.new("Towards a large-scale biologically realistic model of the hippocampus", 2012, 2)]
@papers += [Paper.new("A high-frequency annular-array transducer using interdigital bonded 1-3 composite", 2011, 3)]
@papers += [Paper.new("Contour enhancement benefits peripheral vision task for older adults", 2012, 1)]
@papers += [Paper.new("Characterization of lamina propria and vocal muscle in human vocal fold tissue by ultrasound Nakagami imaging", 2011, 5)]
@papers += [Paper.new("Clinical and molecular characterisation of hereditary dopamine transporter deficiency syndrome: an observational cohort and experimental study", 2011, 9)]
@papers += [Paper.new("Elastic and viscoelastic characterization of agar", 2012, 4)]
@papers += [Paper.new("Closing the loop for memory prosthesis: Detecting the role of hippocampal neural ensembles using nonlinear models", 2012, 4)]
@papers += [Paper.new("Implementation of activity-dependent synaptic plasticity rules for a large-scale biologically realistic model of the hippocampus", 2012, 2)]
@papers += [Paper.new("An implantable MEMS micropump system for drug delivery in small animals", 2012, 7)]
@papers += [Paper.new("MIDG-Emerging grid technologies for multi-site preclinical molecular imaging research communities", 2011, 2)]
@papers += [Paper.new("Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus", 2012, 2)]
@papers += [Paper.new("MSMS software for VR simulations of neural prostheses and patient training and rehabilitation", 2011, 2)]
@papers += [Paper.new("A dynamic model of calcific nodule destabilization in response to monocyte-and oxidized lipid-induced matrix metalloproteinases", 2012, 5)]
@papers += [Paper.new("Targed cell immobilization by ultrasound microbeam", 2011, 5)]
@papers += [Paper.new("Integrated Multiscale Modeling of the Nervous System: Predicting Changes in Hippocampal Network Activity by a Positive AMPA Receptor Modulator", 2011, 2)]
@papers += [Paper.new("Effects of increasing doses of glucagon-like peptide-1 on insulin-releasing phases during intravenous glucose administration in mice", 2011, 2)]
@papers += [Paper.new("Self-separated PZT thick films with bulk-like piezoelectric and electromechanical properties", 2011, 1)]
@papers += [Paper.new("Hyperspectral computed tomographic imaging spectroscopy of vascula oxygen gradients in the rabbit retina in def vivo", 2011, 3)]
@papers += [Paper.new("Epoxy-less packaging methods for electrical contact to parylene-based flat flexible cables", 2011, 2)]
@papers += [Paper.new("A microfluidic platform with integrated flow sensing for focal chemical stimulatio fo cells and tissue", 2011, 1)]
@papers += [Paper.new("Structure and electrical properties of Na0, 5Bi0, 5TiO3 ferroelectric thick films derived from a polymer modified Sol-Gel method", 2011, 3)]
@papers += [Paper.new("Editorial: Special issue on multiscale modeling and analysis in computational biology and medicine -- part-1", 2011, 2)]
@papers += [Paper.new("Microparticle trapping in an ultrasonic Bessel beam", 2011, 3)]
@papers += [Paper.new("Pharmacokinetics of doxycycline in adults with cystic fibrosis", 2012, 1)]
@papers += [Paper.new("Fresnel-based beamforming for low-cost portable ultrasound", 2011, 2)]
@papers += [Paper.new("Development of a combined ultrasound and photoacoustic endoscopic proble", 2011, 1)]
@papers += [Paper.new("Electrochemical impedance spectroscopy to assess vascular oxidative stress", 2011, 2)]
@papers += [Paper.new("Flexible microelectrode arrays to interface epicardial electrical signals with intracardial calcium transients in zebrafish hearts", 2012, 1)]
@papers += [Paper.new("Delivery of demineralized bone matrix (DBM) power using a thermogelling chitosan carrier", 2011, 3)]
@papers += [Paper.new("A high-frequency linear ultrasonic array utilizing an interdigitally bonded 2-2 piezo-composite", 2011, 3)]
@papers += [Paper.new("Enabling high grayscale resolution displays and accurate response time measurements on conventional computers", 2012, 1)]
@papers += [Paper.new("Percutaneously injectable fetal pacemaker: Electrodes, mechanical design and implantation", 2012, 1)]
@papers += [Paper.new("Real-time animation software for customized training to use motor prosthetic systems", 2012, 3)]
@papers += [Paper.new("Design and in vitro evaluation of real-time catheter localization system using time of flight measurements from seven 3.5MHz single element ultrasound transducers", 2011, 3)]
@papers += [Paper.new("Effect of increased load on scapular kinematics during manual wheelchair propulsion in individuals with paraplegia and tetraplegia", 2012, 4)]
@papers += [Paper.new("A two-joint human posture control model with realistic neural delays", 2012, 2)]
@papers += [Paper.new("Backscattering measurement from a single microdroplet", 2011, 1)]
@papers += [Paper.new("Continuous non-invasive cardiac output measurements in the neonate by electrical velocimetry: a comparison with echocardiography", 2012, 3)]
@papers += [Paper.new("Ceftraxion upregulates the glutamate transporter in medial prefrontal cortex and blocks reinstatement of methamphetamine seeking in a condition place preference", 2012, 2)]
@papers += [Paper.new("Role of Müller cells in cone mosaic rearrangement in a rat model of retinitis pigmentosa", 2011, 3)]
@papers += [Paper.new("Novel lead zirconate titanate composite via freezing technology for high frequency transducer applications", 2011, 1)]
@papers += [Paper.new("Nanomaterial interactions with and trafficking across the lung alveolar epithelial barrier: implications for health effects of air-pollution particles", 2011, 1)]
@papers += [Paper.new("Virus-receptor mediated transduction of dendritic cells by lentiviruses enveloped with glycoproteins derived from semliki forest virus", 2011, 2)]
@papers += [Paper.new("Impedance as a method to sense proximity at the Electrode-Retina Interface", 2011, 1)]
@papers += [Paper.new("Electrochemically-based dose measurement for closed-loop drug delivery applications", 2011, 2)]
@papers += [Paper.new("Elastomeric skin selection for a fluid-filled artificial fingertip", 2012, 2)]
@papers += [Paper.new("Functional brain activation during retrieval of visceral pain-conditions passive avoidance in the rat", 2011, 5)]
@papers += [Paper.new("Aquaporin-4 immunareactivity in Müller and amacrine cells of marine teleost fish retina", 2011, 3)]
@papers += [Paper.new("Challenges and new approaches to proving the existence of muscle synergies of neural origin", 2012, 7)]
@papers += [Paper.new("Out of Darkness: Helping the blind see with artificial vision", 2012, 0)]
@papers += [Paper.new("Multi-scale Hyper-time hardware emulation of human motor nervous system based on spiking neurons using FPGA", 2012, 0)]
@papers += [Paper.new("The role of imaging informatics in clinical translational research: perspectives and challenges from a US academic institution", 2012, 0)]
@papers += [Paper.new("An analysis of the expression locus of long-term potentiation in hippocampal CA1 neurons", 2012, 0)]
@papers += [Paper.new("Macrocompression and nanoindentation of soft viscoelastic biological materials", 2012, 0)]
@papers += [Paper.new("Visual attention in spatial cuing and visual search", 2011, 0)]
@papers += [Paper.new("Bioelectronics for sustainable healthcare", 2012, 0)]
@papers += [Paper.new("Natural and accelerated recovery from brain damage: experimental and theoretical approaches", 2012, 0)]
@papers += [Paper.new("Development of integrated preamplifier for high-frequency ultrasonic transducers and low-power handheld receiver", 2011, 1)]
@papers += [Paper.new("Complex biomedical systems: from basic science to translation", 2012, 0)]
@papers += [Paper.new("Visual cortex activation induced by tactile stimulation in late-blind individuals with retinitis pigmentosa", 2011, 0)]
@papers += [Paper.new("High frequency intravascular photoacoustic (IVPA) imaging for differentiating arterial wall layered structures", 2012, 0)]
@papers += [Paper.new("Flexible intravascular thermal sensors to assess atherosclerosis-mediated changes in hemodynamics", 2012, 0)]
@papers += [Paper.new("Importance of spatial cuing of attention in high precision judgments", 2011, 0)]
@papers += [Paper.new("Structure and electrical properties of (111)-oriented Pb...", 2011, 0)]
@papers += [Paper.new("Interphase gap decreases electrical stimulation threshold of retinal ganglion cells", 2011, 2)]
@papers += [Paper.new("Integrated intravascular optical coherence tomography (OCT)-ultrasound (US) catheter for characterization of atherosclerotic plaques in vivo", 2012, 0)]
@papers += [Paper.new("An optimized solution to the grasping problem: the fitness of the human hand", 2012, 0)]
@papers += [Paper.new("Extended necrosis by using dual-curved therapeutic transducer for noninvasive HIFU surgery", 2012, 0)]
@papers += [Paper.new("Persistence of monocular depth perception in the low resolution limit", 2012, 0)]
@papers += [Paper.new("Two-dimensional cell trapping by ultrasound microbeam", 2012, 0)]
@papers += [Paper.new("Reconfiguration of the upper extremity relative to the pushrim affects load distribution during wheelchair propulsion", 2011, 0)]
@papers += [Paper.new("Low power, long life design for smart intelligence, surveillance, and reconnaissance (ISR) sensors", 2012, 0)]
@papers += [Paper.new("Frontal plane knee kinematics in land-and-go tasks with whole body rotation requirements", 2011, 0)]
@papers += [Paper.new("Translocation of PEGylated quantum dots across rat alveolar epithelial cell monolayers", 2011, 1)]
@papers += [Paper.new("Intravascular ultrasound chirp imaging", 2012, 2)]
@papers += [Paper.new("Electrodeposition of platinum-iridium alloy nanowires for hermetic packaging of microelectronics", 2012, 0)]
@papers += [Paper.new("Enzymatic crosslinking and degradation of gelatin as a switch for bone morphogenetic protein-2 activity", 2011, 0)]
@papers += [Paper.new("Ultrasonic microparticel trapping by multi-foci Fresnel lens", 2011, 0)]
@papers += [Paper.new("Natural image statistics based population coding for local edge probability", 2012, 0)]
@papers += [Paper.new("Simulated effect of reaction force redirection on the upper extremity mechanical demand imposed during  manual wheelchair propulsion", 2011, 0)]
@papers += [Paper.new("Tracking the changes of hippocampal population nonlinear dynamics in rats learning a memory-dependent task", 2011, 1)]
@papers += [Paper.new("Real time acoustic sensing of flowing microdroplets in a microfluidic device", 2012, 0)]
@papers += [Paper.new("Modeling of the nervous system: from molecular dynamics and synaptic modulation to neuron spiking activity", 2011, 0)]
@papers += [Paper.new("Circadian rhythmicity in serotonin transporter knockout mice", 2012, 0)]
@papers += [Paper.new("Physiological response of normal and RD mouse retinal ganglion cells to electrical stimulation", 2012, 0)]
@papers += [Paper.new("High speed inverted optical-resolution photoacoustic microscopy", 2011, 0)]
@papers += [Paper.new("80-MHz intravascular ultrasound transducer using PMN-PT free-standing film", 2011, 1)]
@papers += [Paper.new("Reduction of current density at disk electrode periphery by shaping current pulse edges", 2012, 0)]
@papers += [Paper.new("Focal potassiu microinjection in rat hippocampla slices inducing interictal activites", 2012, 0)]
@papers += [Paper.new("Structure and electrical properties of Na0.5 Bi0.5 TiO3 ferroelectric thick films derived from a polymer modified sol-gel...", 2011, 0)]
@papers += [Paper.new("Finger muscle control in children with dystonia", 2011, 1)]
@papers += [Paper.new("In vivo imaging of cell nuclei by photoacoustic microscopy without staining", 2012, 0)]
@papers += [Paper.new("A multimedia comprehensive informatics system with decisio support tools for a multi-site collaboration research of stroke rehabilitation", 2012, 0)]
@papers += [Paper.new("Design of optimal stimulation patterns for neuronal ensembles based on Volterra-type hierarchical modeling", 2012, 0)]
@papers += [Paper.new("Development of a flexible implantable sensor for postoperative monitoring of blood flow", 2012, 0)]
@papers += [Paper.new("Nonlinear optimal muscular control of human posture", 2012, 0)]
@papers += [Paper.new("Primary visual cortex activation responses to tactile stimulation in late-blind individuals with retinitis pigmentosa", 2012, 0)]
@papers += [Paper.new("Prenatal motor development affects observed motor behavior for different incubation periods in domestic chick", 2012, 0)]
@papers += [Paper.new("Combined chirp coded tissue harmonic and fundamental ultrasound imaging for intravascular ultrasound: 20-60 MHz phantom and ex-vivo results", 2012, 0)]
@papers += [Paper.new("Proof of concept: in vitro measurement of correlation between radiodensity and ultrasound echo response of ovine vertebral bodies", 2011, 0)]
@papers += [Paper.new("Reflection-mode submicron-resolution photoacoustic microscopy in vivo", 2012, 0)]
@papers += [Paper.new("Pulse inversion chirp coded tissue harmonic imaging (PI-CTHI) of zebrafish heart using high frame rate ultrasound biomicroscopy", 2012, 0)]
@papers += [Paper.new("Miniature integrated optical coherence tomography (OCT)-ultrasound (US) probe for intravascular imaging", 2012, 0)]
@papers += [Paper.new("Volumetric photoacoustic endoscopy", 2012, 0)]
@papers += [Paper.new("Neuromuscular regulation of reaction forces during the golf swing", 2012, 0)]
@papers += [Paper.new("Real-time rectilinear volumetric acquisition with a 7.5MHz dual-layer array transducer-data acquisition and signal processing", 2012, 0)]
@papers += [Paper.new("Diagnostic biomarkers for Alzheimer's disease using dynamic nonlinear models based on principal dynamic modes", 2011, 0)]
@papers += [Paper.new("Mechanisms dancers use to maintain balance and regulate reaction forces when turning", 2012, 0)]
@papers += [Paper.new("Role of the hippocampus in memory formation: restorative encoding memory integration neural device as a cognitive neural prosthesis", 2012, 0)]
@papers += [Paper.new("Dependence of the retinal ganglion cell's responses on local textures of natural scenes", 2011, 0)]
@papers += [Paper.new("Pre-implantation electrochemical characterization of a Parylene C sheath microelectrode array probe", 2012, 0)]
@papers += [Paper.new("PZT film generator driven by ultrasonic wave", 2012, 1)]
@papers += [Paper.new("A DICOM-based 2nd generation molecular imaging data grid implementing the IHE XDS-i integration profile", 2012, 0)]
@papers += [Paper.new("Landing mechanics during contextually relevant practice conditions", 2011, 0)]
@papers += [Paper.new("Simulations of optimal reweighting of muscle coordination reveal important benefits of muscle redundancy", 2012, 0)]
@papers += [Paper.new("Diagnostic ultrasound: past, present, and future", 2011, 2)]
@papers += [Paper.new("Inducing repetitive action potential firing in neurons via synthesized photoresponsive nanoscale cellular prosthesis", 2012, 0)]
@papers += [Paper.new("Stand-alone front-end system for high-frequency, high-frame-rate coded excitation ultrasonic imaging", 2011, 0)]
@papers += [Paper.new("Improved fabrication of focused single element P (VDF-TrFE) transducer for high frequency ultrasound applications", 2012, 0)]
@papers += [Paper.new("A 2.5-mm outer diameter photoacoustic endoscopic mini-probe based on a highly sensitive PMN-PT ultrasonic transducer", 2012, 0)]
@papers += [Paper.new("Fresnel beamforming and dual apodization with cross-correlation for curvilinear arrays in low-cost portable ultrasound system", 2012, 0)]
@papers += [Paper.new("Endocytic processing of adeno-associated virus type 8 vectors for transduction of target cells", 2012, 1)]
@papers += [Paper.new("Percutaneously injectable fetal pacemaker: electronics, pacing thresholds, and power budget", 2012, 0)]
@papers += [Paper.new("Focused high frequency needle transducer for ultrasonic imaging and trapping", 2012, 2)]
@papers += [Paper.new("Design and testing of a percutaneously implantable fetal pacemaker", 2012, 0)]
@papers += [Paper.new("Intelligent ePR system for evidence-based research in radiotherapy: proton therapy for prostate cancer", 2011, 1)]
@papers += [Paper.new("Virtual prototyping and user training for nerual prosthetic systems in MSMS", 2011, 0)]
@papers += [Paper.new("In vivo imaging of small animal models by photoacoustic microscopy", 2012, 0)]
@papers += [Paper.new("Fluorscence response of human HER2+ cancer and MCF-12F normal cells to 200 MHz ultrasound microbeam stimulation: a preliminary study of membrane...", 2012, 0)]
@papers += [Paper.new("Evaluation of ultrasound-assisted thrombolysis using custom liposomes in a model of retinal vein occlusion", 2012, 0)]
@papers += [Paper.new("Elevated electrochemical impedance in the endoluminal regions with high shear stress: implication for assesing lipid-rich atherosclerotic lesions", 2012, 0)]
@papers += [Paper.new("Acute variations in retinal vascular oxygen content in a rabbit model of retinal venous occlusion", 2012, 0)]
@papers += [Paper.new("Aanalog low-power hardware implementation of a Laguerre-Volterra model of intracellular subthreshold neuronal activity", 2012, 0)]
@papers += [Paper.new("Real-time 3D catheter localizatoin system using ultrasound: recent in vivo results towards endovascular abdominal aortic aneurysm repair", 2011, 1)]
@papers += [Paper.new("Estimation of excitiatory drive from sparse motoneuron sampling", 2012, 0)]
@papers += [Paper.new("preventing ischial pressure ulcers: III. clinical pilot study of chronic neuromuscular electrical stimulation", 2011, 0)]
@papers += [Paper.new("Optimizing the topology of tendon-driven fingers: rationale, predictions, and implementation", 2012, 0)]
@papers += [Paper.new("Design, fabrication, and characterization of an electrochemically-based dose tracking system for closed-loop drug delivery", 2012, 0)]
@papers += [Paper.new("Physiological response of mouse retinal ganglion cells to electrical stimulation: effect of soma size", 2011, 1)]
@papers += [Paper.new("Toward dual-wavelength functional photoacoustic endoscopy: laser and peripheral optical systems development", 2012, 0)]
@papers += [Paper.new("From dynamic movement primitives to associative skill memories", 2012, 0)]
@papers += [Paper.new("Retinal prosthetic systems for treatment of blindness", 2012, 0)]
@papers += [Paper.new("PMN-PT-PZT composite films for high frequency ultrasonic transducer applications", 2012, 2)]
@papers += [Paper.new("Novel limiter using bipolar power transistors for high frequency ultrasonic transducer applications", 2012, 0)]
@papers += [Paper.new("High frequency, high frame rate pulse inversion chirp coded tissue harmonic imaging", 2012, 0)]
@papers += [Paper.new("Modulation of ankle EMG in spinally contused rats through application of neuromuscular electrical stimulation timed to robotic treadmill training", 2012, 0)]
@papers += [Paper.new("Minireview: translational animal models of human menopause: challenges and emerging opportunities", 2012, 1)]
@papers += [Paper.new("Angiopoeitin-2 modulated Survivin expression in OxLDL-induced endotheliar cell apoptosis", 2011, 1)]
@papers += [Paper.new("Understanding the metabolic syndrome: a modeling perspective", 2012, 0)]
@papers += [Paper.new("Model sensitivity and use of the comparative finite element method in mammalian jaw mechanics: mandible performance in the gray wolf", 2011, 1)]
@papers += [Paper.new("Electrochemical impedance spectroscopy to characterize inflammatory atherosclerotic plaques", 2011, 1)]
@papers += [Paper.new("Site-specific modification of adeno-associated viruses via a genetically engineering aldehyde tag", 2012, 0)]
@papers += [Paper.new("Smart center-surround receptive fields: what bayes may say about the neural substrate for color constancy", 2012, 0)]
@papers += [Paper.new("A MEMS electrochemical bellows actuator for fluid metering applications", 2012, 0)]
@papers += [Paper.new("FPGA Architecture of generalized Laguerre-Volterra MIMO model for neural population activies", 2011, 0)]
@papers += [Paper.new("Construction of stable producer cells to make high-titer lentiviral vectors for dendritic cell-based vaccination", 2012, 0)]
@papers += [Paper.new("Fitts' Law in early postural adjustments", 2012, 0)]
@papers += [Paper.new("A study of 1-3 pseudo-random pillar piezocomposites for ultrasound transducers", 2012, 0)]
@papers += [Paper.new("Improved image quality using phase aberration correction and dual apodization with cross-correlation", 2012, 0)]
@papers += [Paper.new("Novel PMN-PT free standing film for high frequency (80MHz) intravascular ultrasonic imaging", 2011, 0)]
@papers += [Paper.new("PD-1/PD-L1 blockade can enhance HIV-1 gag-specific T cell immunity elicited by dendritic cell-directed lentiviral vaccines", 2012, 2)]
@papers += [Paper.new("Rearrangement of the cone mosaic in the retina of the rat model of retinitis pigmentosa", 2012, 2)]
@papers += [Paper.new("Vitreal oxygenation in retinal ischemia reperfusion", 2011, 1)]
@papers += [Paper.new("Mammalian muscle model for predicting force and energetics during physiological behaviors", 2012, 4)]
@papers += [Paper.new("Monitoring ultradian changes in cardiorespiratory control in obstructive sleep apnea syndrome", 2011, 1)]
@papers += [Paper.new("TARGETgene: A tool for identification of potential therapeutic targets in cancer", 2012, 0)]
@papers += [Paper.new("9 understanding haptics by evolving mechatronic systems", 2011, 2)]
@papers += [Paper.new("Autonomic markers of impaired glucose metabolism: effects of sleep-disordering breathing.", 2012, 0)]
@papers += [Paper.new("Rapid fabrication and characterization of MEMS Parylene C bellows for large deflection applications", 2012, 0)]
@papers += [Paper.new("Cathodal transcranial direct current stimulation in children with dystonia: a pilot open-label trial", 2012, 0)]
@papers += [Paper.new("The capacity of subsampled-quadratic classifiers: why neurons with active dendrites may win big", 2012, 0)]
@papers += [Paper.new("A novel dual-color reporter for identifying insulin-producing beta-cells and classifying heterogeneity of insulinoma cell lines", 2012, 0)]
@papers += [Paper.new("Reading english text with spatially-invariant receptive fields: when the binding problem isnt", 2012, 0)]
@papers += [Paper.new("Dendritic cell-directed vaccination with a lentivector encoding PSCA for prostate cancer in mice", 2012, 0)]
@papers += [Paper.new("A TLR4 agonist synergized with dendritic cell-directed lentiviral vectors for inducing antigen-specific immune responses", 2012, 2)]
@papers += [Paper.new("Does Müller cell differentiation occur prior to the emergence of synapses in embryonic turtle retina?", 2012, 0)]
@papers += [Paper.new("An observer study for a computer-aided reading protocol (CARP) in the screening environment for digital mammography", 2011, 1)]
@papers += [Paper.new("Structure and electrical properties of (111) oriented Pb (Mg1/3Nb2/3) O3-PbZrO3-PbTiO3 thin film for high frequency transducer applications", 2011, 0)]
@papers += [Paper.new("Efficacy of clinical gait analysis: a systematic review", 2011, 12)]
@papers += [Paper.new("Photoexcitation of tumor-targeted corroles induces singlet oxygen-mediated augmentation of cytotoxicity", 2012, 1)]
@papers += [Paper.new("KNN/BNT composite lead-free films for high-frequency ultrasonic transducer applications", 2011, 7)]
@papers += [Paper.new("A mechanistic study of tumor-targeted corrole toxicity", 2011, 9)]
@papers += [Paper.new("Mapping functional brain activity using [14C]-iodoantipyrine in male serotonin transporter knockout mice", 2011, 7)]
@papers += [Paper.new("Engineered lentiviral vectors pseudotyped with a CD4 receptor and a fusogenic protein can target cells HIV-1 envelope proteins", 2011, 5)]
@papers += [Paper.new("A cortical neural prosthesis for restoring and enhancing memory", 2011, 33)]
@papers += [Paper.new("Microfluidic droplet sorting with a high frequency ultrasound beam", 2012, 2)]
@papers += [Paper.new("Micromachines thermal flow sensors -- a review", 2012, 1)]
@papers += [Paper.new("Microfluidic acoustic trapping force and stiffness measurement using viscous drag effect", 2012, 0)]
@papers += [Paper.new("Development of a versatile intra-articular pressure sensing array", 2011, 0)]
@papers += [Paper.new("Plasma pharmacokinetics and oral bioavailability of the 3,4,5,6-tetrahydrouridine (THU) prodrug, triacetyl-THU (taTHU), in mice", 2011, 4)]
@papers += [Paper.new("Atrial fibrillation pacing decreases intravascular shear stress in a New Zealand white rabbit model: implications in endothelial function", 2012, 0)]
@papers += [Paper.new("Reusable, adhesiveless and arrayed in-plane microfluidic interconnects", 2011, 4)]
@papers += [Paper.new("Development of a physics-based target shooting game to train amputee users of multijoint upper limb prostheses", 2012, 0)]
@papers += [Paper.new("Anxiolytic-like effect or pregabalin on unconditioned fear in the rat: an autoradiographic brain perfusion mapping and functional connectivity study", 2011, 1)]
@papers += [Paper.new("Asymptotic model of electrical stimulation of nerve fibers", 2012, 0)]
@papers += [Paper.new("Contributors to excess antagonist activity during movement in children with secondary dystonia due to cerebral palsy", 2011, 1)]
@papers += [Paper.new("Determination of relevant neuron-neuron connections for neural prosthetics using time-delayed mutual information: tutorial and preliminary results", 2011, 0)]
@papers += [Paper.new("Simulation of postsynaptic glutamate receptors reveals critical features of glutamatergic transmission", 2011, 2)]
@papers += [Paper.new("Functional connectivity between Layer2/3 and Layer 5 neurons in prefrontal cortex of nonhuman primates during a delayed match-to-sample task", 2012, 0)]
@papers += [Paper.new("Modeling and percept of transcorneal electrical stimulation in humans", 2011, 1)]
@papers += [Paper.new("Frequency and amplitude modulation have different effects on the percepts elicited by retinal stimulation", 2012, 5)]
@papers += [Paper.new("Nonlinear modeling of dynamic interactions within neuronal ensembles using principal dynamic modes", 2012, 0)]
@papers += [Paper.new("Percutaneous collagen induction-regeneration in place of cicatrisation?", 2011, 5)]
@papers += [Paper.new("Enhanced structures and electrical properties of lead-free K0, 5Na0, 5NbO3-BiO, 5Na0, 5TiO3 0--3 composite ferroelectric thick films", 2011, 2)]
@papers += [Paper.new("Development of a 64 channel ultrasonic high frequency linear array imaging system", 2011, 2)]
@papers += [Paper.new("A hardware-based computational platform for generalized Laguerre-Volterra MIMO model for neural activities", 2011, 0)]
@papers += [Paper.new("A nonlinear autoregressive Volterra model of the Hodkin-Huxley equations", 2012, 0)]
@papers += [Paper.new("Multimodality imaging in vivo for preclinical assessment of tumor-targeted doxorubicin nanoparticles", 2012, 4)]
@papers += [Paper.new("Liquid encapsulation in parylene microstructures using integrated annular-plate stiction valves", 2011, 2)]
@papers += [Paper.new("Intraoperative photoacoustic tumor imaging", 2012, 0)]
@papers += [Paper.new("Effect of bandpass filtering on melodic contour identification by cochlear implant users", 2011, 0)]
@papers += [Paper.new("Deep brain stimulation in children: experience and technical pearls", 2011, 7)]
@papers += [Paper.new("Toward perceiving robots humans: three handshake models face the turing-like handshake test", 2012, 1)]
@papers += [Paper.new("A nonlinear optimal human postural regulator with time delay", 2012, 0)]
@papers += [Paper.new("High frequency (> 50 MHz) medical ultrasound linear arrays fabricated from micromachined bulk PZT materials", 2012, 1)]
@papers += [Paper.new("Surface modification of neural stimulating/recording electrodes with high surface area platinum-iridium alloy coatings", 2011, 2)]
@papers += [Paper.new("Elbow functional compensation using a lightweight magnetorheological clutch", 2011, 0)]
@papers += [Paper.new("A local effect of CYP24 inhibition on lung tumor xenograft exposure to 1,25-dihydroxyvitamin D3 is revealed using a novel LC-MS/MS assay", 2012, 2)]
@papers += [Paper.new("Harnessing neuroplasticity for clinical applications", 2011, 59)]
@papers += [Paper.new("Acoustic radiation force impulse (ARFI) imaging of zebrafish embryo by high-frequency coded excitiation sequence", 2012, 1)]
@papers += [Paper.new("A multimode optical imaging system for preclinical applications in vivo: technology development multiscale imaging, and chemotherapy assessment", 2012, 5)]
@papers += [Paper.new("The Volterra-Wiener approach in neuronal modeling", 2011, 1)]
@papers += [Paper.new("20 MHz forward-imaging single-element beam steering with an internal rotating variable-angle reflecting surface: wire phantom and ex vivo pilot study", 2012, 0)]
@papers += [Paper.new("Automated detection of dual p16/Ki67 nuclear immunoreactivity in liquid-based pap tests for improved cervical cancer risk stratification", 2012, 2)]
@papers += [Paper.new("Haptic human-robot interaction", 2012, 0)]
@papers += [Paper.new("Dynamic coordination of leg musculature is associted with agility in high school soccer atheletes", 2011, 0)]
@papers += [Paper.new("A 5-MHz cylindrical dual-layer transducer array for 3-D transrectal ultrasound imaging", 2012, 0)]
@papers += [Paper.new("Continuous electrical stimulation decreased retinal excitability but does not alter retinal morphology", 2011, 3)]
@papers += [Paper.new("Estimation and statistical validation of event-invariant nonlinear dynamic models of hippocampal CA3-CA1 population activites", 2011, 0)]
@papers += [Paper.new("Visual feedback reduces co-contraction in children with dystonia", 2011, 4)]
@papers += [Paper.new("Modeling the autonomic and metabolic effects of obstructive sleep apnea: a simulation study", 2011, 3)]
@papers += [Paper.new("A novel synthesis of computational approaches enables optimization of grasp quality of tendon-driven hands", 2012, 2)]
@papers += [Paper.new("Pulse compression technique for simultaneous HIFU surgery and ultrasonic imaging: A preliminary study", 2012, 0)]
@papers += [Paper.new("Piezoelectric films for high frequency ultrasonic transducers in biomedical applications", 2011, 12)]
@papers += [Paper.new("Novel technology of multimodal ultrasound tomography detects breast lesions", 2012, 0)]
@papers += [Paper.new("Supression of proprioceptive feedback control in movement sequences through intermediate targets", 2012, 0)]
@papers += [Paper.new("Installation and use of LabKey server for proteomics", 2011, 0)]
@papers += [Paper.new("Neural stem cell-mediated CE/CPT-11 enzyme/prodrug therapy in transgenic mouse model of intracerebellar medulloblastoma", 2012, 2)]
@papers += [Paper.new("Optimal isn't good enough", 2012, 2)]
@papers += [Paper.new("Both electrical stimulation thresholds and SMI-32-immunoreactivte retinal ganglion cell density correlate with age in S334ter line 3 rat retina", 2011, 5)]
@papers += [Paper.new("Influence of ionotropic receptor location on their dynamics at glutamatergic synapse", 2012, 0)]
@papers += [Paper.new("Modeling of the nervous system: from modulation of glutamatergic and gabaergic molecular dynamics to neuron spiking activity", 2012, 0)]
@papers += [Paper.new("MEMS-enabled implantable drug infusion pumps for laboratory animal research, preclinical, and clinical applications", 2012, 0)]
@papers += [Paper.new("Location-dependent excitatory synaptic interactions in pyramidal neuron dendrites", 2012, 1)]
@papers += [Paper.new("Dissocation of brain areas associated with force production and stabilization during manipulation of unstable objects", 2011, 1)]
@papers += [Paper.new("Nonlinear dynamic modeling of synaptically driven single hippocampal neuron intracellular activity", 2011, 4)]
@papers += [Paper.new("Towards expansion of human hair follicle stems cells in vitro", 2011, 1)]
@papers += [Paper.new("Muscle coordination is habitual rather than optimal", 2012, 5)]
@papers += [Paper.new("High frequency ultrasound", 2011, 0)]
@papers += [Paper.new("Wideband linear power amplifier for high-frequency ultrasonic coded excitation imaging", 2012, 1)]
@papers += [Paper.new("Nonlinear dynamic modeling of neuron action potential threshold during synaptically driven boradband intracellular activity", 2012, 0)]
@papers += [Paper.new("Distributed control of uncertain systems using superpositions of linear operators", 2011, 1)]
@papers += [Paper.new("Separability of stimulus paramter encoding by on-off directionally selective rabbit retinal ganglion cells", 2011, 1)]
@papers += [Paper.new("Relationships between spike-free local field potentials and spike timing in human temporal cortex", 2012, 4)]
@papers += [Paper.new("Quantitative and systems pharmacology in the post-genomic era: new approaches to discovering drugs and understanding therapeutic mechanisms", 2011, 12)]
@papers += [Paper.new("Path integral reinforcement learning", 2012, 0)]
@papers += [Paper.new("Digit training in noise can improve cochlear implant users' speech understanding in noise", 2011, 3)]
@papers += [Paper.new("Changes in wrist muscle activity with forearm posture: implications for the study of sensorimotor transformations", 2012, 0)]
@papers += [Paper.new("Cognitive signals for brain-machine interfaces in posterior parietal cortex include continuous 3D trajectory commands", 2012, 0)]
@papers += [Paper.new("An involuntary stereotypical grasp tendency pervades voluntary dynamic multifinger manipulations", 2012, 1)]
@papers += [Paper.new("Evaluation of a non-invasive command scheme for upper limb prostheses in a virtual reality reach and grasp task", 2011, 3)]
@papers += [Paper.new("Intracellular-signaling tumor-regression modeling of the pro-apoptotic receptor agaonists dulanermin and conatumumab", 2012, 0)]
@papers += [Paper.new("Restorative encoding memory integrative neural device: REMIND", 2011, 1)]
@papers += [Paper.new("Toward simple control for complex, autonomic robotic applications: combining discrete and rhythmic motor primitives", 2011, 6)]
@papers += [Paper.new("Distinguising linear vs. non-linear integration ins CA1 radial oblique dendrites: it's about time", 2011, 5)]
@papers += [Paper.new("Extrapolatable analytical functions for tendon excursions and moment armos from sparse datasets", 2012, 1)]
@papers += [Paper.new("Reducing current spread using current focusing in Cochlear implant users", 2012, 4)]
@papers += [Paper.new("Pedatric ophthalmology 2012 learning from our past, looking to our future", 2012, 0)]
@papers += [Paper.new("High-efficiency MEMS electrochemical actuators and electrochemical impedance spectroscopy characterization", 2012, 4)]
@papers += [Paper.new("Discrete synapse recurrent neural network with time-varying delays for nonlinear system modeling and its application on seismic signal classification", 2011, 0)]
@papers += [Paper.new("Asymmetric routings with fewer tendons can offer both flexible endpoint stiffness control and high force-production capabilities in robotic fingers", 2012, 1)]
@papers += [Paper.new("A nonlinear optimal human postural regulator", 2011, 0)]
@papers += [Paper.new("Sparse optimal motor estimation (SOME) for extracting commands for prosthetic limbs", 2012, 0)]
@papers += [Paper.new("High-performace and scalable system architecture for the real-time estimation of generalized Laguerre-Volterra MIMO model from neural population spiking...", 2011, 2)]
@papers += [Paper.new("A hippocampal cognitive prosthesis: multi-input, multi-output nonlinear modeling and VLSI implementation", 2012, 7)]
@papers += [Paper.new("Neuroimaging biomarkers of preterm brain injury: toward developing the preterm connectome", 2012, 4)]
@papers += [Paper.new("Roles of group I metabotropic glutamate receptors under physiological conditions and in neurodegeneration", 2012, 1)]
@papers += [Paper.new("Improving virtual channel discrimination in a multi-channel context", 2012, 0)]


@cite_count = 0
@cite_histogram = Hash.new(0)
@word_histogram = Hash.new(0)

@papers.each do |paper|
  puts "#{paper.year}: #{paper.cites} cites | #{paper.title}"
  @cite_count += paper.cites
  
  paper.title.downcase.split.each { |word| @word_histogram[word] += 1 }
  @cite_histogram[paper.cites] += 1
  
end


@impact_factor = @cite_count.to_f/@papers.length

puts "#{@papers.length} total papers in 2011-2012"
puts "#{@cite_count} total citations"
puts "Impact Factor: #{@impact_factor}"


@cite_histogram.sort_by{ |cites, occurrences| cites }.each { |elem|
  puts "#{elem[0]} has #{elem[1]} occurrences"
}

@word_histogram.sort_by{ |cites, occurrences| occurrences }.reverse_each { |word, occurrences|
  puts "#{word} has #{occurrences} occurrences" if occurrences >= 5 && word.length > 4
}