git checkout pr/374 brew install -v trinity

pr374.log

==> Downloading http://downloads.sourceforge.net/trinityrnaseq/trinityrnaseq_r2013-02-25.tgz
Already downloaded: /Library/Caches/Homebrew/trinity-r2013-02-25.tgz
tar xf /Library/Caches/Homebrew/trinity-r2013-02-25.tgz
==> make
make 
Using gnu compiler for Inchworm and Chrysalis
cd Inchworm && (test -e configure || autoreconf) \
                && ./configure --prefix=`pwd`  && make install
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for library containing cos... none required
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating config.h
config.status: config.h is unchanged
config.status: executing depfiles commands
Making install in src
if g++ -DHAVE_CONFIG_H -I. -I. -I..   -F/usr/local/Frameworks -pedantic -fopenmp -Wall -Wextra -Wno-long-long -Wno-deprecated -m64 -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -MT Fasta_entry.o -MD -MP -MF ".deps/Fasta_entry.Tpo" -c -o Fasta_entry.o Fasta_entry.cpp; \
	then mv -f ".deps/Fasta_entry.Tpo" ".deps/Fasta_entry.Po"; else rm -f ".deps/Fasta_entry.Tpo"; exit 1; fi
if g++ -DHAVE_CONFIG_H -I. -I. -I..   -F/usr/local/Frameworks -pedantic -fopenmp -Wall -Wextra -Wno-long-long -Wno-deprecated -m64 -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -MT IRKE_run.o -MD -MP -MF ".deps/IRKE_run.Tpo" -c -o IRKE_run.o IRKE_run.cpp; \
	then mv -f ".deps/IRKE_run.Tpo" ".deps/IRKE_run.Po"; else rm -f ".deps/IRKE_run.Tpo"; exit 1; fi
if g++ -DHAVE_CONFIG_H -I. -I. -I..   -F/usr/local/Frameworks -pedantic -fopenmp -Wall -Wextra -Wno-long-long -Wno-deprecated -m64 -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -MT sequenceUtil.o -MD -MP -MF ".deps/sequenceUtil.Tpo" -c -o sequenceUtil.o sequenceUtil.cpp; \
	then mv -f ".deps/sequenceUtil.Tpo" ".deps/sequenceUtil.Po"; else rm -f ".deps/sequenceUtil.Tpo"; exit 1; fi
if g++ -DHAVE_CONFIG_H -I. -I. -I..   -F/usr/local/Frameworks -pedantic -fopenmp -Wall -Wextra -Wno-long-long -Wno-deprecated -m64 -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -MT IRKE.o -MD -MP -MF ".deps/IRKE.Tpo" -c -o IRKE.o IRKE.cpp; \
	then mv -f ".deps/IRKE.Tpo" ".deps/IRKE.Po"; else rm -f ".deps/IRKE.Tpo"; exit 1; fi
if g++ -DHAVE_CONFIG_H -I. -I. -I..   -F/usr/local/Frameworks -pedantic -fopenmp -Wall -Wextra -Wno-long-long -Wno-deprecated -m64 -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -MT KmerCounter.o -MD -MP -MF ".deps/KmerCounter.Tpo" -c -o KmerCounter.o KmerCounter.cpp; \
	then mv -f ".deps/KmerCounter.Tpo" ".deps/KmerCounter.Po"; else rm -f ".deps/KmerCounter.Tpo"; exit 1; fi
IRKE_run.cpp:9:10: fatal error: 'omp.h' file not found
#include <omp.h>
         ^
1 error generated.
make[2]: *** [IRKE_run.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [install-recursive] Error 1
make: *** [all] Error 2
Error: trinity did not build
==> Formula
Tap: homebrew/science
Path: /usr/local/Library/Taps/homebrew-science/trinity.rb
==> Configuration
HOMEBREW_VERSION: 0.9.5
HEAD: ae59e09903b701240b6602eaa260cb94ecf19f7b
CPU: quad-core 64-bit ivybridge
OS X: 10.8.5-x86_64
Xcode: 5.0
CLT: 5.0.0.0.1.1377666378
X11: 2.7.4 => /opt/X11
==> ENV
CFLAGS: -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
CXXFLAGS: -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
CPPFLAGS: -F/usr/local/Frameworks
LDFLAGS: -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names
MAKEFLAGS: -j4
CMAKE_FRAMEWORK_PATH: /usr/local/Frameworks
MACOSX_DEPLOYMENT_TARGET: 10.8
PKG_CONFIG_LIBDIR: /usr/local/lib/pkgconfig:/usr/local/Library/ENV/pkgconfig/10.8:/usr/lib/pkgconfig
OBJC: /usr/bin/clang
PATH: /usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/usr/texbin:/usr/local/Library/Contributions/cmd
CPATH: /usr/local/include