hex.txt

1. Hex:

wget http://hex.loria.fr/dist800/hex-8.0.0-x64-mint14.run
chmod +x ./hex-8.0.0-x64-mint14.run 
./hex-8.0.0-x64-mint14.run 

Press Enter if there is any default value (in [...] )
Otherwise, type "y"



2. Sam:
wget http://sam.loria.fr/download/sam-2.0.4-x64-mint17.bin
chmod +x ./sam-2.0.4-x64-mint17.bin 
./sam-2.0.4-x64-mint17.bin 

Gives an error:
./sam-2.0.4-x64-mint17.bin: 1: eval: sam_setup.bin: not found

cd sam-tmp-2.0.4
chmod +x sam_setup.bin
./sam_setup.bin



3. Update .bashrc
cat .bash_profile >> .bashrc 
Then, source .bashrc or open a new terminal
and type "hex" or "sam"


Manuals in browser:
http://hex.loria.fr/manual800/hex_manual.html
http://sam.loria.fr/manual.php

NGL viewer:
http://proteinformatics.charite.de/ngl-tools/ngl/html/ngl.html