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Created August 17, 2018 14:50
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[julia-1.0.0] DataFrames JLD2 segfault
signal (11): Segmentation fault: 11
in expression starting at /Users/skleinbo/DataFrameJLD2Segfault.jl:4
index at /Users/skleinbo/.julia/packages/DataFrames/QYzTe/src/dataframe/dataframe.jl:224 [inlined]
ncol at /Users/skleinbo/.julia/packages/DataFrames/QYzTe/src/dataframe/dataframe.jl:229 [inlined]
insert_single_column! at /Users/skleinbo/.julia/packages/DataFrames/QYzTe/src/dataframe/dataframe.jl:336
setindex! at /Users/skleinbo/.julia/packages/DataFrames/QYzTe/src/dataframe/dataframe.jl:391 [inlined]
setproperty! at /Users/skleinbo/.julia/packages/DataFrames/QYzTe/src/abstractdataframe/abstractdataframe.jl:241
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
macro expansion at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/data.jl:1276 [inlined]
jlconvert at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/data.jl:1232
read_data at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/dataio.jl:37
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
read_data at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/datasets.jl:149
load_dataset at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/datasets.jl:92
getindex at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/groups.jl:108
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
read at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/JLD2.jl:326
#45 at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/loadsave.jl:134 [inlined]
#jldopen#31 at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/loadsave.jl:4
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
jl_apply at /Users/skleinbo/julia/src/./julia.h:1536
jl_invoke at /Users/skleinbo/julia/src/gf.c:56
jldopen at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/loadsave.jl:2 [inlined]
#load#44 at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/loadsave.jl:133 [inlined]
load at /Users/skleinbo/.julia/packages/JLD2/IASHd/src/loadsave.jl:133
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
jl_apply at /Users/skleinbo/julia/src/./julia.h:1536
jl_f__apply at /Users/skleinbo/julia/src/builtins.c:556
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
do_call at /Users/skleinbo/julia/src/interpreter.c:324
eval_value at /Users/skleinbo/julia/src/interpreter.c:428
eval_stmt_value at /Users/skleinbo/julia/src/interpreter.c:363
eval_body at /Users/skleinbo/julia/src/interpreter.c:682
jl_interpret_toplevel_thunk_callback at /Users/skleinbo/julia/src/interpreter.c:799
unknown function (ip: 0xfffffffffffffffe)
unknown function (ip: 0x10ecbabcf)
unknown function (ip: 0x5)
jl_interpret_toplevel_thunk at /Users/skleinbo/julia/src/interpreter.c:808
jl_toplevel_eval_flex at /Users/skleinbo/julia/src/toplevel.c:787
jl_toplevel_eval at /Users/skleinbo/julia/src/toplevel.c:796
jl_toplevel_eval_in at /Users/skleinbo/julia/src/builtins.c:622
eval at ./boot.jl:319 [inlined]
#load#27 at /Users/skleinbo/.julia/packages/FileIO/kflOT/src/loadsave.jl:188
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
jl_apply at /Users/skleinbo/julia/src/./julia.h:1536
jl_invoke at /Users/skleinbo/julia/src/gf.c:56
load at /Users/skleinbo/.julia/packages/FileIO/kflOT/src/loadsave.jl:172
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
#load#13 at /Users/skleinbo/.julia/packages/FileIO/kflOT/src/loadsave.jl:118
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
jl_apply at /Users/skleinbo/julia/src/./julia.h:1536
jl_invoke at /Users/skleinbo/julia/src/gf.c:56
load at /Users/skleinbo/.julia/packages/FileIO/kflOT/src/loadsave.jl:118
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_fptr_trampoline at /Users/skleinbo/julia/src/gf.c:1829
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
do_call at /Users/skleinbo/julia/src/interpreter.c:324
eval_value at /Users/skleinbo/julia/src/interpreter.c:428
eval_stmt_value at /Users/skleinbo/julia/src/interpreter.c:363
eval_body at /Users/skleinbo/julia/src/interpreter.c:682
jl_interpret_toplevel_thunk_callback at /Users/skleinbo/julia/src/interpreter.c:799
unknown function (ip: 0xfffffffffffffffe)
unknown function (ip: 0x10ed9e58f)
unknown function (ip: 0xffffffffffffffff)
jl_interpret_toplevel_thunk at /Users/skleinbo/julia/src/interpreter.c:808
jl_toplevel_eval_flex at /Users/skleinbo/julia/src/toplevel.c:787
jl_parse_eval_all at /Users/skleinbo/julia/src/ast.c:838
jl_load at /Users/skleinbo/julia/src/toplevel.c:821
jl_load_ at /Users/skleinbo/julia/src/toplevel.c:828
include at ./boot.jl:317 [inlined]
include_relative at ./loading.jl:1038
include at ./sysimg.jl:29
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
exec_options at ./client.jl:229
_start at ./client.jl:421
jl_fptr_args at /Users/skleinbo/julia/src/gf.c:1839
jl_apply_generic at /Users/skleinbo/julia/src/gf.c:2182
jl_apply at /Users/skleinbo/julia/./julia (unknown line)
true_main at /Users/skleinbo/julia/./julia (unknown line)
main at /Users/skleinbo/julia/./julia (unknown line)
Allocations: 66420565 (Pool: 66405787; Big: 14778); GC: 141
Process 7810 stopped
* thread #1, queue = 'com.apple.main-thread', stop reason = EXC_BAD_ACCESS (code=1, address=0x8)
frame #0: 0x000000011f62d21b
-> 0x11f62d21b: movq 0x8(%rax), %rcx
0x11f62d21f: cmpq $0x0, 0x8(%rcx)
0x11f62d224: je 0x11f62d247
0x11f62d226: movabsq $0x11f629a70, %rax ; imm = 0x11F629A70
Target 0: (julia) stopped.
(lldb) bt
* thread #1, queue = 'com.apple.main-thread', stop reason = EXC_BAD_ACCESS (code=1, address=0x8)
* frame #0: 0x000000011f62d21b
frame #1: 0x000000011f62d171
frame #2: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010dd35990, args=0x00007ffeefbfb7e0, nargs=4) at gf.c:1829
frame #3: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfb7e0, nargs=4) at gf.c:2182
frame #4: 0x000000011f62a400
frame #5: 0x000000011f62978f
frame #6: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010e6fd990, args=0x00007ffeefbfba40, nargs=4) at gf.c:1829
frame #7: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfba40, nargs=4) at gf.c:2182
frame #8: 0x000000011f5ef275
frame #9: 0x000000011f5f0938
frame #10: 0x000000011f61b126
frame #11: 0x00000001000b29b0 libjulia-debug.1.0.dylib`jl_fptr_args(m=0x000000010ec87790, args=0x00007ffeefbfbe48, nargs=3) at gf.c:1839
frame #12: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010ec87790, args=0x00007ffeefbfbe48, nargs=3) at gf.c:1829
frame #13: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfbe48, nargs=3) at gf.c:2182
frame #14: 0x000000011f61aaad
frame #15: 0x00000001000b29b0 libjulia-debug.1.0.dylib`jl_fptr_args(m=0x000000010ebf0790, args=0x00007ffeefbfc1a8, nargs=6) at gf.c:1839
frame #16: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010ebf0790, args=0x00007ffeefbfc1a8, nargs=6) at gf.c:1829
frame #17: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfc1a8, nargs=6) at gf.c:2182
frame #18: 0x00000001000b16d9 libjulia-debug.1.0.dylib`jl_apply(args=0x00007ffeefbfc1a8, nargs=6) at julia.h:1536
frame #19: 0x00000001000b15f4 libjulia-debug.1.0.dylib`jl_invoke(meth=0x000000010ebf0790, args=0x00007ffeefbfc1a8, nargs=6) at gf.c:56
frame #20: 0x000000011f61a7aa
frame #21: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010e2efc10, args=0x00007ffeefbfc320, nargs=3) at gf.c:1829
frame #22: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfc320, nargs=3) at gf.c:2182
frame #23: 0x00000001000cba09 libjulia-debug.1.0.dylib`jl_apply(args=0x00007ffeefbfc320, nargs=3) at julia.h:1536
frame #24: 0x00000001000cb858 libjulia-debug.1.0.dylib`jl_f__apply(F=0x0000000108138220, args=0x00007ffeefbfc588, nargs=3) at builtins.c:556
frame #25: 0x00000001000b29b0 libjulia-debug.1.0.dylib`jl_fptr_args(m=0x0000000108138100, args=0x00007ffeefbfc580, nargs=4) at gf.c:1839
frame #26: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfc580, nargs=4) at gf.c:2182
frame #27: 0x00000001004b01f5 libjulia-debug.1.0.dylib`do_call(args=0x000000010dc74f30, nargs=4, s=0x00007ffeefbfcb20) at interpreter.c:324
frame #28: 0x00000001004aeea4 libjulia-debug.1.0.dylib`eval_value(e=0x000000010e90b470, s=0x00007ffeefbfcb20) at interpreter.c:428
frame #29: 0x00000001004af8bb libjulia-debug.1.0.dylib`eval_stmt_value(stmt=0x000000010e90b470, s=0x00007ffeefbfcb20) at interpreter.c:363
frame #30: 0x00000001004ae14f libjulia-debug.1.0.dylib`eval_body(stmts=0x000000010dc44b10, s=0x00007ffeefbfcb20, start=0, toplevel=1) at interpreter.c:682
frame #31: 0x00000001004ae664 libjulia-debug.1.0.dylib`jl_interpret_toplevel_thunk_callback(s=0x00007ffeefbfcb20, vargs=0x00007ffeefbfcb88) at interpreter.c:799
frame #32: 0x00000001000d58ec libjulia-debug.1.0.dylib`enter_interpreter_frame + 28
frame #33: 0x00000001004ae714 libjulia-debug.1.0.dylib`jl_interpret_toplevel_thunk(m=0x000000010501b200, src=0x000000010ecbabd0) at interpreter.c:808
frame #34: 0x0000000100102adb libjulia-debug.1.0.dylib`jl_toplevel_eval_flex(m=0x000000010501b200, e=0x000000010e90b250, fast=1, expanded=0) at toplevel.c:787
frame #35: 0x0000000100103e32 libjulia-debug.1.0.dylib`jl_toplevel_eval(m=0x000000010501b200, v=0x000000010e90b250) at toplevel.c:796
frame #36: 0x00000001000cc3e7 libjulia-debug.1.0.dylib`jl_toplevel_eval_in(m=0x000000010501b200, ex=0x000000010e90b250) at builtins.c:622
frame #37: 0x000000011f61a2bc
frame #38: 0x00000001000b29b0 libjulia-debug.1.0.dylib`jl_fptr_args(m=0x000000010e165110, args=0x00007ffeefbfd2d8, nargs=5) at gf.c:1839
frame #39: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010e165110, args=0x00007ffeefbfd2d8, nargs=5) at gf.c:1829
frame #40: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfd2d8, nargs=5) at gf.c:2182
frame #41: 0x00000001000b16d9 libjulia-debug.1.0.dylib`jl_apply(args=0x00007ffeefbfd2d8, nargs=5) at julia.h:1536
frame #42: 0x00000001000b15f4 libjulia-debug.1.0.dylib`jl_invoke(meth=0x000000010e165110, args=0x00007ffeefbfd2d8, nargs=5) at gf.c:56
frame #43: 0x000000011f6199f6
frame #44: 0x00000001000b1680 libjulia-debug.1.0.dylib`jl_fptr_trampoline(m=0x000000010d38b910, args=0x00007ffeefbfd420, nargs=3) at gf.c:1829
frame #45: 0x00000001000baf6c libjulia-debug.1.0.dylib`jl_apply_generic(args=0x00007ffeefbfd420, nargs=3) at gf.c:2182
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