Created
August 23, 2017 05:59
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pre-format filenames of PE FASTQ files for JSON config file
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| for i in $(ls | cut -f 1 -d "_" | uniq | sort -n); do j=$(ls ${i}_*.gz); s1=$(echo $j | cut -f 1 -d " "); s2=$(echo $j | cut -f 2 -d " "); echo "[\"${s1}\", \"${s2}\"],"; done |
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