I hereby claim:
- I am tpoulsen on github.
- I am travispoulsen (https://keybase.io/travispoulsen) on keybase.
- I have a public key whose fingerprint is CAA7 9680 10EE 6B2E 9ECF 37B0 57F4 D90C 0D84 F6DE
To claim this, I am signing this object:
sylvie smpoulsen
smpoulsen
/ keybase.md
Last active
June 21, 2016 13:17
smpoulsen
/ RNA-seq Assembly Wrapper
Created
July 8, 2013 15:14
This script combines the steps of read trimming, checking read quality, and de novo assembly of Illumina RNA-seq reads by combining Trimmomatic, FastQC, and Trinity.
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| ''' | |
| Author: Travis Poulsen | |
| Date: 08 Feb. 2013 | |
| This script is a wrapper to automate the steps of: | |
| - Read quality checking (FastQC) | |
| - Read trimming (Trimmomatic) | |
| - Read assembly (Trinity) | |
| - Basic assembly quality checks |