smsaladi
/ hydrophobic_moment.py
Created
November 15, 2017 23:45
— forked from JoaoRodrigues/hydrophobic_moment.md
Peptide/Protein Hydrophobic Moment Calculator
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| #!/usr/bin/env python | |
| """ | |
| Calculates a set of properties from a protein sequence: | |
| - hydrophobicity (according to a particular scale) | |
| - mean hydrophobic dipole moment assuming it is an alpha-helix. | |
| - total charge (at pH 7.4) | |
| - amino acid composition | |
| - discimination factor according to Rob Keller (IJMS, 2011) |