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Last active April 14, 2020 09:25
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OLS config snippet discussed in https://github.com/EBISPOT/OLS/issues/152
- id: chemont
preferredPrefix: ChemOnt
title: ChemOnt: A semantic-based ontology for chemical and biological data integration.
uri: http://classyfire.wishartlab.com/
description: "ChemOnt is comphrehensive, computable, and manually curated.
It covers >4000 chemical classes of organic and inorganic compounds. The set of classes was created
and extended by extracting common terms from the scientific literature (e.g.: IUPAC) and available databases.
The flexibility The taxonomy is currently mapped to the ChEBI and LIPID MAPS ontologies in collaboration
with the respective teams. Moreover, ChemOnt has been partially mappped to the MeSH thesaurus.
The mapping effort in this regard is ongoing. Thanks to the flexibility and simplicity of its structure
as well as its chemo-taxonomic definition, ClassyFire is meant to easily evolve to cover the increasing number
of newly discovered scaffolds of natural and synthetic chemical entities, facilitating biochemical research."
homepage: http://classyfire.wishartlab.com/
mailing_list: http://feedback.wishartlab.com/?site=classyfire ## <- This is a web based form
definition_property:
- http://purl.obolibrary.org/obo/IAO_0000115
synonym_property:
- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym ## STN: Unsure here
hierarchical_property:
- is_a ## Needs proper IAO or BFO or RO term.
hidden_property:
- None ?
base_uri:
- http://www.ebi.ac.uk/efo/EFO_ ## Needs modification
reasoner: OWL2 ## Unsure here ???
oboSlims: false
ontology_purl : http://www.ebi.ac.uk/efo/efo.owl ## Needs modification
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