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sorsaffari/protein_structure_prediction_query_1.gql

Created November 2, 2018 15:19
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Protein Structure Prediction: Get all structures of a particular sequence
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protein_structure_prediction_query_1.gql
match
$target-sequence isa sequence "MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY";
$structure isa structure;
(mapping-sequence: $target-sequence, mapped-structure: $structure) isa sequence-structure-mapping;
get $structure;
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