sr320

Katherine Silliman, Laura H Spencer, Samuel J White, Steven B Roberts (2023) Epigenetic and genetic population structure is coupled in a marine invertebrate Genome Biology and Evolution, 2023;, evad013 doi:10.1093/gbe/evad013

Laura H. Spencer, Erin Horkan, Ryan Crim, Steven B. Roberts (2021) [Latent effects of winter warming on Olympia oyster reproduction and

sr320

Keybase proof

I hereby claim:

• I am sr320 on github.
• I am sr320 (https://keybase.io/sr320) on keybase.
• I have a public key ASBwRjGw-qF_63Uf7zPuZ2PC-6kxek-eViLk3WskPrTk7Ao

To claim this, I am signing this object:

sr320

steven@emu:~/bioinfo/021417$ java -Xmx16g -jar /home/shared/abacus/abacus.jar -p \
> Abacus-01.param

***********************************
	Abacus
	Version: 2.5
***********************************
Developed and written by: Damian Fermin and Alexey Nesvizhskii
Copyright 2010 Damian Fermin

sr320

steven@emu:~/bioinfo/021417$ java -Xmx16g -jar /home/shared/abacus/abacus.jar -p \
> Abacus-01.param

***********************************
	Abacus
	Version: 2.5
***********************************
Developed and written by: Damian Fermin and Alexey Nesvizhskii
Copyright 2010 Damian Fermin

sr320

steven@emu:~/bioinfo/021417$ java -Xmx16g -jar /home/shared/abacus/abacus.jar -p \
> Abacus-01.param

***********************************
	Abacus
	Version: 2.5
***********************************
Developed and written by: Damian Fermin and Alexey Nesvizhskii
Copyright 2010 Damian Fermin

sr320

 /usr/tpp_install/tpp/bin/xinteract
 /usr/tpp_install/tpp/bin/xinteract (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
 usage: xinteract (generaloptions) (-Oprophetoptions) (-iiprophetoptions) (-Mptmprophetoptions) (-Xxpressoptions) (-Aasapoptions) (-L<conditionfile>libraoptions) xmlfile1 xmlfile2 ....

 generaloptions:
            For developers:
                 -t  [run regression test against a previously derived result]
                 -t! [learn results for regression test]
                 -t# [run regression test, do not stop on test failure]

sr320

sr320

{
 "metadata": {
  "name": "_scratch"
 },
 "nbformat": 3,
 "nbformat_minor": 0,
 "worksheets": [
  {
   "cells": [
    {

sr320

set rowcount 10
SELECT *
  FROM [sr320@washington.edu].[qDOD Cgigas Gene Descriptions (Swiss-prot)]

sr320

SELECT [chr]
     , CAST([pos] as INTEGER) as [pos]
     , [strand]
     , [context]
     , CAST([ratio] as FLOAT) as [ratio]
     , CAST([eff_CT_count] as INTEGER) as [eff_CT_count]
     , CAST([C_count] as INTEGER) as [C_count]
     , CAST([CT_count] as INTEGER) as [CT_count]
     , CAST([rev_G_count] as INTEGER) as [rev_G_count]
     , CAST([CI_lower] as FLOAT) as [CI_lower]