Created
April 29, 2015 10:03
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paml 4.8a PKGBUILD
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# Maintainer: Brandon Invergo <brandon@invergo.net> | |
pkgname=paml | |
pkgver=4.8a | |
pkgrel=1 | |
pkgdesc="The PAML (Phylogenetic Analysis by Maximum Likelihood) package of programs, including codeml and baseml" | |
arch=('i686' 'x86_64') | |
url="http://abacus.gene.ucl.ac.uk/software/paml.html" | |
license=('custom') | |
source=("http://abacus.gene.ucl.ac.uk/software/$pkgname$pkgver.tgz") | |
md5sums=('be5ff973a1cf8f70a5307ab48d07569a') | |
prepare() { | |
cd "$srcdir/${pkgname}4.8" | |
sed -n '/PAML is distributed/p' README.txt > LICENSE | |
} | |
build() { | |
cd "$srcdir/${pkgname}4.8/src" | |
make | |
} | |
package() { | |
cd "$srcdir/${pkgname}4.8/src" | |
mkdir -p "${pkgdir}/usr/bin" | |
install -m755 baseml "${pkgdir}/usr/bin/baseml" | |
install -m755 basemlg "${pkgdir}/usr/bin/basemlg" | |
install -m755 codeml "${pkgdir}/usr/bin/codeml" | |
install -m755 pamp "${pkgdir}/usr/bin/pamp" | |
install -m755 evolver "${pkgdir}/usr/bin/evolver" | |
install -m755 yn00 "${pkgdir}/usr/bin/yn00" | |
install -m755 chi2 "${pkgdir}/usr/bin/chi2" | |
mkdir -p "${pkgdir}/usr/share/licenses/${pkgname}/" | |
install -m644 ../LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE" | |
} |
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