taurus@TUD: Install PIConGPU dependencies to run on the partition

PIConGPU_0.6.0-dev_taurus-tud.sh

#!/usr/bin/env bash
#
# Authors: Axel Huebl, Marco Garten, Klaus Steiniger
#
# last updated: 2021-08-18

# It is advisable to compile libraries on an interactive node
# > srun -p gpu2-interactive --gres=gpu:0 --ntasks=1 --pty --mem=8G -t 2:00:00 bash  # get resources on a node
# > ./PIConGPU_0.6.0-dev_taurus-tud.sh | tee lib_inst.out 2>lib_inst.err  # compile libraries

PIC_BRANCH="dev"

# get PIConGPU profile
if [ ! -f "$PIC_PROFILE" ]; then
    export PIC_PROFILE_NAME="$HOME/k80_picongpu.profile"
    wget -O $PIC_PROFILE_NAME \
        https://raw.githubusercontent.com/ComputationalRadiationPhysics/picongpu/dev/etc/picongpu/taurus-tud/k80_picongpu.profile.example
    # load modules
    source "$PIC_PROFILE_NAME"
else
    source "$PIC_PROFILE"
fi

set -euf -o pipefail

# create temporary directory for software source files
export SOURCE_DIR="$HOME/lib_temp"
mkdir -p $SOURCE_DIR


#   c-blosc
if [ ! -d "$BLOSC_ROOT" ]; then
    cd $SOURCE_DIR
    git clone -b v1.21.0 https://github.com/Blosc/c-blosc.git \
        $SOURCE_DIR/c-blosc
    mkdir c-blosc-build
    cd c-blosc-build
    cmake -DCMAKE_INSTALL_PREFIX=$BLOSC_ROOT \
        -DPREFER_EXTERNAL_ZLIB=ON \
        $SOURCE_DIR/c-blosc
    make install
fi

#   PNGwriter
if [ ! -d "$PNGwriter_ROOT" ]; then
    cd $SOURCE_DIR
    git clone -b 0.7.0 https://github.com/pngwriter/pngwriter.git \
        $SOURCE_DIR/pngwriter
    mkdir pngwriter-build
    cd pngwriter-build
    cmake -DCMAKE_INSTALL_PREFIX=$PNGwriter_ROOT \
        $SOURCE_DIR/pngwriter
    make install
fi

#   ADIOS2
if [ ! -d "$ADIOS2_ROOT" ]; then
    cd $SOURCE_DIR
    git clone -b v2.7.1 https://github.com/ornladios/ADIOS2.git \
        $SOURCE_DIR/adios2
    mkdir $SOURCE_DIR/adios2-build
    cd $SOURCE_DIR/adios2-build
    cmake $SOURCE_DIR/adios2 -DADIOS2_BUILD_EXAMPLES=OFF -DADIOS2_BUILD_TESTING=OFF \
        -DCMAKE_INSTALL_PREFIX="$ADIOS2_ROOT" -DADIOS2_USE_Fortran=OFF \
        -DADIOS2_USE_BZip2=OFF  -DADIOS2_USE_PNG=OFF \
        -DADIOS2_USE_Python=OFF
    make install
fi

#   openPMD-api
if [ ! -d "OPENPMD_ROOT" ]; then
    cd $SOURCE_DIR
    git clone -b 0.14.1 https://github.com/openPMD/openPMD-api.git \
        $SOURCE_DIR/openpmd-api
    mkdir $SOURCE_DIR/openpmd-api-build
    cd $SOURCE_DIR/openpmd-api-build
    cmake $SOURCE_DIR/openpmd-api \
        -DBUILD_EXAMPLES=OFF -DBUILD_TESTING=OFF \
        -DopenPMD_USE_PYTHON=ON \
        -DCMAKE_INSTALL_PREFIX="$OPENPMD_ROOT"
    make install
fi

cd $HOME

# get PIConGPU
if [ ! -d "$PICSRC" ]; then
    git clone -b $PIC_BRANCH https://github.com/ComputationalRadiationPhysics/picongpu.git \
        "$PICSRC"
fi

# message to user
echo ''
echo 'edit user & email within picongpu.profile, e.g. via:'
echo '    vim $PIC_PROFILE'
echo 'delete temporary folder for library compilation'
printf "    rm -rf %s\n" $SOURCE_DIR