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taurus@TUD: Install PIConGPU dependencies to run on the partition
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#!/usr/bin/env bash | |
# | |
# Authors: Axel Huebl, Marco Garten, Klaus Steiniger | |
# | |
# last updated: 2021-08-18 | |
# It is advisable to compile libraries on an interactive node | |
# > srun -p gpu2-interactive --gres=gpu:0 --ntasks=1 --pty --mem=8G -t 2:00:00 bash # get resources on a node | |
# > ./PIConGPU_0.6.0-dev_taurus-tud.sh | tee lib_inst.out 2>lib_inst.err # compile libraries | |
PIC_BRANCH="dev" | |
# get PIConGPU profile | |
if [ ! -f "$PIC_PROFILE" ]; then | |
export PIC_PROFILE_NAME="$HOME/k80_picongpu.profile" | |
wget -O $PIC_PROFILE_NAME \ | |
https://raw.githubusercontent.com/ComputationalRadiationPhysics/picongpu/dev/etc/picongpu/taurus-tud/k80_picongpu.profile.example | |
# load modules | |
source "$PIC_PROFILE_NAME" | |
else | |
source "$PIC_PROFILE" | |
fi | |
set -euf -o pipefail | |
# create temporary directory for software source files | |
export SOURCE_DIR="$HOME/lib_temp" | |
mkdir -p $SOURCE_DIR | |
# c-blosc | |
if [ ! -d "$BLOSC_ROOT" ]; then | |
cd $SOURCE_DIR | |
git clone -b v1.21.0 https://github.com/Blosc/c-blosc.git \ | |
$SOURCE_DIR/c-blosc | |
mkdir c-blosc-build | |
cd c-blosc-build | |
cmake -DCMAKE_INSTALL_PREFIX=$BLOSC_ROOT \ | |
-DPREFER_EXTERNAL_ZLIB=ON \ | |
$SOURCE_DIR/c-blosc | |
make install | |
fi | |
# PNGwriter | |
if [ ! -d "$PNGwriter_ROOT" ]; then | |
cd $SOURCE_DIR | |
git clone -b 0.7.0 https://github.com/pngwriter/pngwriter.git \ | |
$SOURCE_DIR/pngwriter | |
mkdir pngwriter-build | |
cd pngwriter-build | |
cmake -DCMAKE_INSTALL_PREFIX=$PNGwriter_ROOT \ | |
$SOURCE_DIR/pngwriter | |
make install | |
fi | |
# ADIOS2 | |
if [ ! -d "$ADIOS2_ROOT" ]; then | |
cd $SOURCE_DIR | |
git clone -b v2.7.1 https://github.com/ornladios/ADIOS2.git \ | |
$SOURCE_DIR/adios2 | |
mkdir $SOURCE_DIR/adios2-build | |
cd $SOURCE_DIR/adios2-build | |
cmake $SOURCE_DIR/adios2 -DADIOS2_BUILD_EXAMPLES=OFF -DADIOS2_BUILD_TESTING=OFF \ | |
-DCMAKE_INSTALL_PREFIX="$ADIOS2_ROOT" -DADIOS2_USE_Fortran=OFF \ | |
-DADIOS2_USE_BZip2=OFF -DADIOS2_USE_PNG=OFF \ | |
-DADIOS2_USE_Python=OFF | |
make install | |
fi | |
# openPMD-api | |
if [ ! -d "OPENPMD_ROOT" ]; then | |
cd $SOURCE_DIR | |
git clone -b 0.14.1 https://github.com/openPMD/openPMD-api.git \ | |
$SOURCE_DIR/openpmd-api | |
mkdir $SOURCE_DIR/openpmd-api-build | |
cd $SOURCE_DIR/openpmd-api-build | |
cmake $SOURCE_DIR/openpmd-api \ | |
-DBUILD_EXAMPLES=OFF -DBUILD_TESTING=OFF \ | |
-DopenPMD_USE_PYTHON=ON \ | |
-DCMAKE_INSTALL_PREFIX="$OPENPMD_ROOT" | |
make install | |
fi | |
cd $HOME | |
# get PIConGPU | |
if [ ! -d "$PICSRC" ]; then | |
git clone -b $PIC_BRANCH https://github.com/ComputationalRadiationPhysics/picongpu.git \ | |
"$PICSRC" | |
fi | |
# message to user | |
echo '' | |
echo 'edit user & email within picongpu.profile, e.g. via:' | |
echo ' vim $PIC_PROFILE' | |
echo 'delete temporary folder for library compilation' | |
printf " rm -rf %s\n" $SOURCE_DIR |
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