Stian Lågstad stianlagstad

## sortTestsByTimeTaken.sh
#!/bin/bash

# This script goes through tests results in `target/surefire-reports` and sorts the results by the
# amount of time they took. This is helpful to identify slow tests.

set -e

# Make sure the surefire folder exists
if [ ! -d "target/surefire-reports" ]; then
	echo "The folder 'target/surefire-reports' doesn't exists. Please run tests before using this script."

## pyodbc in Docker with MySQL and Oracle
FROM python:3

WORKDIR /usr/src/app

# Copy over the drivers
# MySQL ODBC Ansi
COPY drivers/mysql-connector-odbc-5.3.9-linux-ubuntu16.04-x86-64bit.tar.gz .
# Oracle 11.2
COPY drivers/oracle-instantclient11.2-basic-11.2.0.4.0-1.x86_64.rpm .
COPY drivers/oracle-instantclient11.2-odbc-11.2.0.4.0-1.x86_64.rpm .

## getSequenceById.sh
egrep -A 3 '@readid1|readid2|readid3' reads.fastq | sed '/^--$/d'
	#!/bin/bash

	# This script goes through tests results in `target/surefire-reports` and sorts the results by the
	# amount of time they took. This is helpful to identify slow tests.

	set -e

	# Make sure the surefire folder exists
	if [ ! -d "target/surefire-reports" ]; then
	echo "The folder 'target/surefire-reports' doesn't exists. Please run tests before using this script."
	FROM python:3

	WORKDIR /usr/src/app

	# Copy over the drivers
	# MySQL ODBC Ansi
	COPY drivers/mysql-connector-odbc-5.3.9-linux-ubuntu16.04-x86-64bit.tar.gz .
	# Oracle 11.2
	COPY drivers/oracle-instantclient11.2-basic-11.2.0.4.0-1.x86_64.rpm .
	COPY drivers/oracle-instantclient11.2-odbc-11.2.0.4.0-1.x86_64.rpm .