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How to use Docker volumes with an R example
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#!/bin/bash | |
# M Y 2018-08-21. An example script on Docker volumes showing | |
# how to run a sandboxed 'R' code inside the container. | |
# Tip: Using `ls` (or else) with the volumes is helpful especially | |
# when need to understand why some particular files cannot be found. | |
set -x | |
V="rvol" | |
mkdir $V | |
printf "2 * 4 \n\ncat('success!!') \n\n " > $V/calc.R | |
## With VOL layer in the Dockerfile: | |
printf "FROM r-base:latest \n\nVOLUME /%s\n " "$V)" > Dockerfile | |
docker build -t test-docker-vol . | |
docker run --rm \ | |
-v $PWD/$V:/$V \ | |
test-docker-vol \ | |
Rscript $V/calc.R | |
## With binding volume arg command: | |
docker run --rm \ | |
-v $PWD/$V:/$V r-base:latest \ | |
Rscript rvol/calc.R | |
## Clean up: | |
rm Dockerfile | |
rm -r $V/* | |
rmdir $V | |
docker rmi test-docker-vol |
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