Run Jupyter notebooks as a batch

run-batch-notebooks.py

import glob
import nbformat
from nbconvert.preprocessors import ExecutePreprocessor, CellExecutionError

fpaths = glob.glob('pcard-submissions/*.ipynb')

for fpath in fpaths:
    print(f'Running {fpath}')
    nb = nbformat.read(fpath, as_version=4)

    try:
        print('=============================')
        ep = ExecutePreprocessor(timeout=600, kernel_name='python3')
        ep.preprocess(nb)
    except CellExecutionError as e:
        print(f'CellExecutionError on {fpath}')
        print('-----------------------------')
        print(e)