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February 15, 2023 14:28
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python311Packages.pyregion: error logs
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| Sourcing python-remove-tests-dir-hook | |
| Sourcing python-catch-conflicts-hook.sh | |
| Sourcing python-remove-bin-bytecode-hook.sh | |
| Sourcing setuptools-build-hook | |
| Using setuptoolsBuildPhase | |
| Using setuptoolsShellHook | |
| Sourcing pip-install-hook | |
| Using pipInstallPhase | |
| Sourcing python-imports-check-hook.sh | |
| Using pythonImportsCheckPhase | |
| Sourcing python-namespaces-hook | |
| Sourcing python-catch-conflicts-hook.sh | |
| Sourcing setuptools-check-hook | |
| Using setuptoolsCheckPhase | |
| Sourcing pytest-check-hook | |
| Using pytestCheckPhase | |
| Removing setuptoolsCheckPhase | |
| @nix { "action": "setPhase", "phase": "unpackPhase" } | |
| unpacking sources | |
| unpacking source archive /nix/store/w16vafwcgn2q9h2g2pkjbraxaw9d5qy7-source | |
| source root is source | |
| setting SOURCE_DATE_EPOCH to timestamp 315619200 of file source/setup.py | |
| @nix { "action": "setPhase", "phase": "patchPhase" } | |
| patching sources | |
| applying patch /nix/store/j4haznyszcqyvg7ig6wqhfiqw5sxnf07-082649730d353a0d0c0ee9619be1aa501aabba62.patch | |
| patching file pyregion/conftest.py | |
| applying patch /nix/store/wznwy3ad7vl4giqcnc70ky12bamxb8gp-c448a465dd56887979da62aec6138fc89bb37b19.patch | |
| patching file pyregion/wcs_converter.py | |
| @nix { "action": "setPhase", "phase": "configurePhase" } | |
| configuring | |
| no configure script, doing nothing | |
| @nix { "action": "setPhase", "phase": "buildPhase" } | |
| building | |
| Executing setuptoolsBuildPhase | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/setup_helpers.py:161: AstropyDeprecationWarning: The package argument to generate_version_py has been deprecated and will be removed in future. Specify the package name in setup.cfg instead | |
| warnings.warn('The package argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/setup_helpers.py:166: AstropyDeprecationWarning: The version argument to generate_version_py has been deprecated and will be removed in future. Specify the version number in setup.cfg instead | |
| warnings.warn('The version argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/setup_helpers.py:171: AstropyDeprecationWarning: The release argument to generate_version_py has been deprecated and will be removed in future. We now use the presence of the "dev" string in the version to determine whether this is a release | |
| warnings.warn('The release argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/version_helpers.py:239: AstropyDeprecationWarning: The packagename argument to generate_version_py has been deprecated and will be removed in future. Specify the package name in setup.cfg instead | |
| warnings.warn('The packagename argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/version_helpers.py:244: AstropyDeprecationWarning: The version argument to generate_version_py has been deprecated and will be removed in future. Specify the version number in setup.cfg instead | |
| warnings.warn('The version argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/version_helpers.py:249: AstropyDeprecationWarning: The release argument to generate_version_py has been deprecated and will be removed in future. We now use the presence of the "dev" string in the version to determine whether this is a release | |
| warnings.warn('The release argument to generate_version_py has ' | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/git_helpers.py:114: UserWarning: Error running git: [Errno 2] No such file or directory: 'git' | |
| warnings.warn('Error running git: ' + str(e)) | |
| /nix/store/iy30xk2b3h9gryyk3x3h03yrvjjj5x73-python3.10-astropy-helpers-4.0.1/lib/python3.10/site-packages/astropy_helpers/setup_helpers.py:411: SetuptoolsDeprecationWarning: As setuptools moves its configuration towards `pyproject.toml`, | |
| `setuptools.config.read_configuration` became deprecated. | |
| For the time being, you can use the `setuptools.config.setupcfg` module | |
| to access a backward compatible API, but this module is provisional | |
| and might be removed in the future. | |
| conf = read_configuration(setup_cfg) | |
| /nix/store/v9qczq3z12j33pnkzdfmpv7mq6zw9yvm-python3.10-setuptools-65.6.3/lib/python3.10/site-packages/setuptools/dist.py:316: DistDeprecationWarning: use_2to3 is ignored. | |
| warnings.warn(f"{attr} is ignored.", DistDeprecationWarning) | |
| running bdist_wheel | |
| running build | |
| running build_py | |
| creating build | |
| creating build/lib.linux-x86_64-cpython-310 | |
| creating build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/version.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/wcs_converter.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/conftest.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/wcs_helper.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/region_to_filter.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/region_numbers.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/physical_coordinate.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/parser_helper.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/mpl_helper.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/ds9_region_parser.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/ds9_attr_parser.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/core.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/_astropy_init.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| copying pyregion/__init__.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| creating build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_wcs.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_region_numbers.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_region.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_parser_helper.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_get_mask.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_ds9_region_parser.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_ds9_attr_parser.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/test_cube.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/setup_package.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/__init__.py -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| copying pyregion/tests/coveragerc -> build/lib.linux-x86_64-cpython-310/pyregion/tests | |
| creating build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test03_img.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test03_icrs.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test03_gal.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test03_fk5.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test03_ciao_physical.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test02_1_img.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_icrs.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk4.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test_text.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test_context.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli_wcs.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli_ciao.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test04_img.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test02.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_print.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_mixed.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_img.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_gal.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5_sexagecimal.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5_degree.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ds9_physical.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ciao_physical.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ciao.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test01.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test02_1_fk5.reg -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits04.header -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits03.header -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/test.header -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits02.header -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits01.header -> build/lib.linux-x86_64-cpython-310/pyregion/tests/data | |
| running build_ext | |
| /nix/store/0pyymzxf7n0fzpaqnvwv92ab72v3jq8d-python3-3.10.9/lib/python3.10/importlib/__init__.py:169: UserWarning: The NumPy module was reloaded (imported a second time). This can in some cases result in small but subtle issues and is discouraged. | |
| _bootstrap._exec(spec, module) | |
| cythoning pyregion/_region_filter.pyx to pyregion/_region_filter.c | |
| /nix/store/qg2nqilh2pdjnrb9dwxq78rgqwjmqzgp-python3.10-cython-0.29.33/lib/python3.10/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/source/pyregion/_region_filter.pyx | |
| tree = Parsing.p_module(s, pxd, full_module_name) | |
| building 'pyregion.compiler_version' extension | |
| creating build/temp.linux-x86_64-cpython-310 | |
| creating build/temp.linux-x86_64-cpython-310/pyregion | |
| gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -I/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/include -fPIC -I/nix/store/0pyymzxf7n0fzpaqnvwv92ab72v3jq8d-python3-3.10.9/include/python3.10 -c pyregion/_compiler.c -o build/temp.linux-x86_64-cpython-310/pyregion/_compiler.o | |
| gcc -shared -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib build/temp.linux-x86_64-cpython-310/pyregion/_compiler.o -L/nix/store/0pyymzxf7n0fzpaqnvwv92ab72v3jq8d-python3-3.10.9/lib -o build/lib.linux-x86_64-cpython-310/pyregion/compiler_version.cpython-310-x86_64-linux-gnu.so | |
| building 'pyregion._region_filter' extension | |
| gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -I/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/include -fPIC -I/nix/store/24h72h9za3xchndqfh2l52mq396b7yw5-python3.10-numpy-1.23.5/lib/python3.10/site-packages/numpy/core/include -I/nix/store/0pyymzxf7n0fzpaqnvwv92ab72v3jq8d-python3-3.10.9/include/python3.10 -c pyregion/_region_filter.c -o build/temp.linux-x86_64-cpython-310/pyregion/_region_filter.o -Wp,-w -Wno-unused-function | |
| gcc -shared -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib build/temp.linux-x86_64-cpython-310/pyregion/_region_filter.o -L/nix/store/0pyymzxf7n0fzpaqnvwv92ab72v3jq8d-python3-3.10.9/lib -o build/lib.linux-x86_64-cpython-310/pyregion/_region_filter.cpython-310-x86_64-linux-gnu.so | |
| copying pyregion/cython_version.py -> build/lib.linux-x86_64-cpython-310/pyregion | |
| /nix/store/v9qczq3z12j33pnkzdfmpv7mq6zw9yvm-python3.10-setuptools-65.6.3/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. | |
| warnings.warn( | |
| installing to build/bdist.linux-x86_64/wheel | |
| running install | |
| running install_lib | |
| creating build/bdist.linux-x86_64 | |
| creating build/bdist.linux-x86_64/wheel | |
| creating build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/cython_version.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/_region_filter.cpython-310-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/compiler_version.cpython-310-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/pyregion | |
| creating build/bdist.linux-x86_64/wheel/pyregion/tests | |
| creating build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/sample_fits01.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/sample_fits02.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/sample_fits03.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/sample_fits04.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test02_1_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_ciao.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_ciao_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_ds9_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_fk5_degree.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_fk5_sexagecimal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_gal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_mixed.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_print.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test02.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test04_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test_annuli.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test_annuli_ciao.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test_annuli_wcs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test_context.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test_text.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_fk4.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test01_icrs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test02_1_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test03_ciao_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test03_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test03_gal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test03_icrs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/data/test03_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/coveragerc -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/__init__.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/setup_package.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_cube.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_ds9_attr_parser.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_ds9_region_parser.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_get_mask.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_parser_helper.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_region.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_region_numbers.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/tests/test_wcs.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/__init__.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/_astropy_init.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/core.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/ds9_attr_parser.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/ds9_region_parser.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/mpl_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/parser_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/physical_coordinate.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/region_numbers.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/region_to_filter.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/wcs_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/conftest.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/wcs_converter.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-310/pyregion/version.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| running install_egg_info | |
| running egg_info | |
| creating pyregion.egg-info | |
| writing pyregion.egg-info/PKG-INFO | |
| writing dependency_links to pyregion.egg-info/dependency_links.txt | |
| writing requirements to pyregion.egg-info/requires.txt | |
| writing top-level names to pyregion.egg-info/top_level.txt | |
| writing manifest file 'pyregion.egg-info/SOURCES.txt' | |
| reading manifest file 'pyregion.egg-info/SOURCES.txt' | |
| reading manifest template 'MANIFEST.in' | |
| warning: no files found matching '*' under directory 'licenses' | |
| warning: no files found matching '*' under directory 'cextern' | |
| warning: no files found matching '*' under directory 'scripts' | |
| no previously-included directories found matching 'build' | |
| no previously-included directories found matching 'docs/_build' | |
| no previously-included directories found matching 'docs/api' | |
| warning: no files found matching 'astropy_helpers/README.rst' | |
| warning: no files found matching 'astropy_helpers/CHANGES.rst' | |
| warning: no files found matching 'astropy_helpers/LICENSE.rst' | |
| warning: no files found matching '*' under directory 'astropy_helpers/licenses' | |
| warning: no files found matching 'astropy_helpers/ez_setup.py' | |
| warning: no files found matching 'astropy_helpers/ah_bootstrap.py' | |
| warning: no files found matching '*.py' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.pyx' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.c' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.h' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*' under directory 'astropy_helpers/astropy_helpers.egg-info' | |
| warning: no files found matching '*' under directory 'astropy_helpers/astropy_helpers/sphinx' | |
| no previously-included directories found matching 'astropy_helpers/build' | |
| no previously-included directories found matching 'astropy_helpers/astropy_helpers/tests' | |
| warning: no previously-included files matching '*.pyc' found anywhere in distribution | |
| warning: no previously-included files matching '*.o' found anywhere in distribution | |
| adding license file 'LICENSE' | |
| writing manifest file 'pyregion.egg-info/SOURCES.txt' | |
| Copying pyregion.egg-info to build/bdist.linux-x86_64/wheel/pyregion-2.1.1-py3.10.egg-info | |
| running install_scripts | |
| creating build/bdist.linux-x86_64/wheel/pyregion-2.1.1.dist-info/WHEEL | |
| creating 'dist/pyregion-2.1.1-cp310-cp310-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it | |
| adding 'pyregion/__init__.py' | |
| adding 'pyregion/_astropy_init.py' | |
| adding 'pyregion/_region_filter.cpython-310-x86_64-linux-gnu.so' | |
| adding 'pyregion/compiler_version.cpython-310-x86_64-linux-gnu.so' | |
| adding 'pyregion/conftest.py' | |
| adding 'pyregion/core.py' | |
| adding 'pyregion/cython_version.py' | |
| adding 'pyregion/ds9_attr_parser.py' | |
| adding 'pyregion/ds9_region_parser.py' | |
| adding 'pyregion/mpl_helper.py' | |
| adding 'pyregion/parser_helper.py' | |
| adding 'pyregion/physical_coordinate.py' | |
| adding 'pyregion/region_numbers.py' | |
| adding 'pyregion/region_to_filter.py' | |
| adding 'pyregion/version.py' | |
| adding 'pyregion/wcs_converter.py' | |
| adding 'pyregion/wcs_helper.py' | |
| adding 'pyregion/tests/__init__.py' | |
| adding 'pyregion/tests/coveragerc' | |
| adding 'pyregion/tests/setup_package.py' | |
| adding 'pyregion/tests/test_cube.py' | |
| adding 'pyregion/tests/test_ds9_attr_parser.py' | |
| adding 'pyregion/tests/test_ds9_region_parser.py' | |
| adding 'pyregion/tests/test_get_mask.py' | |
| adding 'pyregion/tests/test_parser_helper.py' | |
| adding 'pyregion/tests/test_region.py' | |
| adding 'pyregion/tests/test_region_numbers.py' | |
| adding 'pyregion/tests/test_wcs.py' | |
| adding 'pyregion/tests/data/sample_fits01.header' | |
| adding 'pyregion/tests/data/sample_fits02.header' | |
| adding 'pyregion/tests/data/sample_fits03.header' | |
| adding 'pyregion/tests/data/sample_fits04.header' | |
| adding 'pyregion/tests/data/test.header' | |
| adding 'pyregion/tests/data/test01.reg' | |
| adding 'pyregion/tests/data/test01_ciao.reg' | |
| adding 'pyregion/tests/data/test01_ciao_physical.reg' | |
| adding 'pyregion/tests/data/test01_ds9_physical.reg' | |
| adding 'pyregion/tests/data/test01_fk4.reg' | |
| adding 'pyregion/tests/data/test01_fk5.reg' | |
| adding 'pyregion/tests/data/test01_fk5_degree.reg' | |
| adding 'pyregion/tests/data/test01_fk5_sexagecimal.reg' | |
| adding 'pyregion/tests/data/test01_gal.reg' | |
| adding 'pyregion/tests/data/test01_icrs.reg' | |
| adding 'pyregion/tests/data/test01_img.reg' | |
| adding 'pyregion/tests/data/test01_mixed.reg' | |
| adding 'pyregion/tests/data/test01_print.reg' | |
| adding 'pyregion/tests/data/test02.reg' | |
| adding 'pyregion/tests/data/test02_1_fk5.reg' | |
| adding 'pyregion/tests/data/test02_1_img.reg' | |
| adding 'pyregion/tests/data/test03_ciao_physical.reg' | |
| adding 'pyregion/tests/data/test03_fk5.reg' | |
| adding 'pyregion/tests/data/test03_gal.reg' | |
| adding 'pyregion/tests/data/test03_icrs.reg' | |
| adding 'pyregion/tests/data/test03_img.reg' | |
| adding 'pyregion/tests/data/test04_img.reg' | |
| adding 'pyregion/tests/data/test_annuli.reg' | |
| adding 'pyregion/tests/data/test_annuli_ciao.reg' | |
| adding 'pyregion/tests/data/test_annuli_wcs.reg' | |
| adding 'pyregion/tests/data/test_context.reg' | |
| adding 'pyregion/tests/data/test_text.reg' | |
| adding 'pyregion-2.1.1.dist-info/LICENSE' | |
| adding 'pyregion-2.1.1.dist-info/METADATA' | |
| adding 'pyregion-2.1.1.dist-info/WHEEL' | |
| adding 'pyregion-2.1.1.dist-info/top_level.txt' | |
| adding 'pyregion-2.1.1.dist-info/RECORD' | |
| removing build/bdist.linux-x86_64/wheel | |
| Finished executing setuptoolsBuildPhase | |
| @nix { "action": "setPhase", "phase": "installPhase" } | |
| installing | |
| Executing pipInstallPhase | |
| /build/source/dist /build/source | |
| Processing ./pyregion-2.1.1-cp310-cp310-linux_x86_64.whl | |
| Requirement already satisfied: numpy in /nix/store/24h72h9za3xchndqfh2l52mq396b7yw5-python3.10-numpy-1.23.5/lib/python3.10/site-packages (from pyregion==2.1.1) (1.23.5) | |
| Requirement already satisfied: pyparsing>=2.0 in /nix/store/kncd63i9ikf66w54md2vpbwl756pzshx-python3.10-pyparsing-3.0.9/lib/python3.10/site-packages (from pyregion==2.1.1) (3.0.9) | |
| Requirement already satisfied: astropy>=1.0 in /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages (from pyregion==2.1.1) (5.2) | |
| Requirement already satisfied: Cython in /nix/store/qg2nqilh2pdjnrb9dwxq78rgqwjmqzgp-python3.10-cython-0.29.33/lib/python3.10/site-packages (from pyregion==2.1.1) (0.29.33) | |
| Requirement already satisfied: pyerfa>=2.0 in /nix/store/p3aipsvqn3rpf8c5z0fk1yfqwjkxvh5m-python3.10-pyerfa-2.0.0.1/lib/python3.10/site-packages (from astropy>=1.0->pyregion==2.1.1) (2.0.0.1) | |
| Requirement already satisfied: packaging>=19.0 in /nix/store/s93sm7cyxbsfrpam3ainzkqsqdd6z4sm-python3.10-packaging-21.3/lib/python3.10/site-packages (from astropy>=1.0->pyregion==2.1.1) (21.3) | |
| Requirement already satisfied: PyYAML>=3.13 in /nix/store/myxzg6g2wrrlrik9g3qdx788qx8ngilp-python3.10-pyyaml-6.0/lib/python3.10/site-packages (from astropy>=1.0->pyregion==2.1.1) (6.0) | |
| Installing collected packages: pyregion | |
| Successfully installed pyregion-2.1.1 | |
| /build/source | |
| Finished executing pipInstallPhase | |
| @nix { "action": "setPhase", "phase": "pythonOutputDistPhase" } | |
| pythonOutputDistPhase | |
| Executing pythonOutputDistPhase | |
| Finished executing pythonOutputDistPhase | |
| @nix { "action": "setPhase", "phase": "fixupPhase" } | |
| post-installation fixup | |
| shrinking RPATHs of ELF executables and libraries in /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1 | |
| shrinking /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1/lib/python3.10/site-packages/pyregion/_region_filter.cpython-310-x86_64-linux-gnu.so | |
| shrinking /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1/lib/python3.10/site-packages/pyregion/compiler_version.cpython-310-x86_64-linux-gnu.so | |
| checking for references to /build/ in /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1... | |
| patching script interpreter paths in /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1 | |
| stripping (with command strip and flags -S) in /nix/store/sp0rrqmg46qzmmswq2c5r8my45d8h3n5-python3.10-pyregion-2.1.1/lib | |
| shrinking RPATHs of ELF executables and libraries in /nix/store/76gzknwgxk8x53jyv7xsrg8a5lyy6dcy-python3.10-pyregion-2.1.1-dist | |
| checking for references to /build/ in /nix/store/76gzknwgxk8x53jyv7xsrg8a5lyy6dcy-python3.10-pyregion-2.1.1-dist... | |
| patching script interpreter paths in /nix/store/76gzknwgxk8x53jyv7xsrg8a5lyy6dcy-python3.10-pyregion-2.1.1-dist | |
| Executing pythonRemoveTestsDir | |
| Finished executing pythonRemoveTestsDir | |
| @nix { "action": "setPhase", "phase": "installCheckPhase" } | |
| running install tests | |
| no Makefile or custom installCheckPhase, doing nothing | |
| @nix { "action": "setPhase", "phase": "pythonCatchConflictsPhase" } | |
| pythonCatchConflictsPhase | |
| @nix { "action": "setPhase", "phase": "pythonRemoveBinBytecodePhase" } | |
| pythonRemoveBinBytecodePhase | |
| @nix { "action": "setPhase", "phase": "pythonImportsCheckPhase" } | |
| pythonImportsCheckPhase | |
| Executing pythonImportsCheckPhase | |
| @nix { "action": "setPhase", "phase": "pytestCheckPhase" } | |
| pytestCheckPhase | |
| Executing pytestCheckPhase | |
| /build/source/build/lib.linux-x86_64-cpython-310 /build/source | |
| ============================= test session starts ============================== | |
| platform linux -- Python 3.10.9, pytest-7.2.0, pluggy-1.0.0 | |
| rootdir: /build/source, configfile: setup.cfg | |
| plugins: astropy-0.10.0, hypothesis-6.61.0, arraydiff-0.5.0, astropy-header-0.2.2, cov-4.0.0, doctestplus-0.12.1, filter-subpackage-0.1.2, mock-3.10.0, openfiles-0.5.0, remotedata-0.4.0 | |
| collecting ... | |
| collected 45 items | |
| pyregion/tests/test_cube.py . [ 2%] | |
| pyregion/tests/test_ds9_attr_parser.py ... [ 8%] | |
| pyregion/tests/test_ds9_region_parser.py .... [ 17%] | |
| pyregion/tests/test_get_mask.py . [ 20%] | |
| pyregion/tests/test_parser_helper.py . [ 22%] | |
| pyregion/tests/test_region.py ........F............. [ 71%] | |
| pyregion/tests/test_region_numbers.py ....... [ 86%] | |
| pyregion/tests/test_wcs.py ....F. [100%] | |
| =================================== FAILURES =================================== | |
| _______ test_region[test01_img.reg-test01_fk4.reg-sample_fits01.header] ________ | |
| ref_name = 'test01_img.reg', reg_name = 'test01_fk4.reg' | |
| header_name = 'sample_fits01.header' | |
| @pytest.mark.parametrize(("ref_name", "reg_name", "header_name"), [ | |
| ("test01_img.reg", "test01_fk5_sexagecimal.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_gal.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ds9_physical.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk5_degree.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_mixed.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ciao.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ciao_physical.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk5.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk4.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_icrs.reg", "sample_fits01.header"), | |
| ("test02_1_img.reg", "test02_1_fk5.reg", "sample_fits02.header"), | |
| ("test_annuli.reg", "test_annuli_wcs.reg", "sample_fits01.header"), | |
| ("test03_img.reg", "test03_fk5.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_icrs.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_ciao_physical.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_gal.reg", "sample_fits03.header"), | |
| ]) | |
| def test_region(ref_name, reg_name, header_name): | |
| header = Header.fromtextfile(join(rootdir, header_name)) | |
| ref_region = pyregion_open(join(rootdir, ref_name)).as_imagecoord(header) | |
| > r = pyregion_open(join(rootdir, reg_name)).as_imagecoord(header) | |
| pyregion/tests/test_region.py:39: | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| pyregion/core.py:70: in as_imagecoord | |
| shape_list, comment_list = zip(*list(r)) | |
| pyregion/ds9_region_parser.py:187: in sky_to_image | |
| new_coords = convert_to_imagecoord(shape, header) | |
| pyregion/wcs_converter.py:93: in convert_to_imagecoord | |
| for x in old_coordinate.to_pixel(new_wcs, origin=1) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/sky_coordinate.py:1789: in to_pixel | |
| return skycoord_to_pixel(self, wcs=wcs, origin=origin, mode=mode) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/wcs/utils.py:575: in skycoord_to_pixel | |
| coords = coords.transform_to(frame) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/sky_coordinate.py:704: in transform_to | |
| new_coord = trans(self.frame, generic_frame) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/transformations.py:1575: in __call__ | |
| curr_coord = t(curr_coord, curr_toframe) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/transformations.py:1144: in __call__ | |
| return supcall(fromcoord, toframe) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/builtin_frames/fk4.py:156: in fk4_to_fk4_no_e | |
| u.Quantity(fk4_e_terms(fk4coord.equinox), u.dimensionless_unscaled, copy=False), | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/builtin_frames/fk4.py:131: in fk4_e_terms | |
| o = earth.obliquity(equinox.jd, algorithm=1980) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/earth_orientation.py:110: in obliquity | |
| return np.rad2deg(erfa.obl80(jd, 0)) | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| date1 = 2433282.42345905, date2 = 0 | |
| def obl80(date1, date2): | |
| """ | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Parameters | |
| ---------- | |
| date1 : double array | |
| date2 : double array | |
| Returns | |
| ------- | |
| c_retval : double array | |
| Notes | |
| ----- | |
| Wraps ERFA function ``eraObl80``. The ERFA documentation is:: | |
| - - - - - - - - - | |
| e r a O b l 8 0 | |
| - - - - - - - - - | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Given: | |
| date1,date2 double TT as a 2-part Julian Date (Note 1) | |
| Returned (function value): | |
| double obliquity of the ecliptic (radians, Note 2) | |
| Notes: | |
| 1) The TT date date1+date2 is a Julian Date, apportioned in any | |
| convenient way between the two arguments. For example, | |
| JD(TT)=2450123.7 could be expressed in any of these ways, | |
| among others: | |
| date1 date2 | |
| 2450123.7 0.0 (JD method) | |
| 2451545.0 -1421.3 (J2000 method) | |
| 2400000.5 50123.2 (MJD method) | |
| 2450123.5 0.2 (date & time method) | |
| The JD method is the most natural and convenient to use in | |
| cases where the loss of several decimal digits of resolution | |
| is acceptable. The J2000 method is best matched to the way | |
| the argument is handled internally and will deliver the | |
| optimum resolution. The MJD method and the date & time methods | |
| are both good compromises between resolution and convenience. | |
| 2) The result is the angle between the ecliptic and mean equator of | |
| date date1+date2. | |
| Reference: | |
| Explanatory Supplement to the Astronomical Almanac, | |
| P. Kenneth Seidelmann (ed), University Science Books (1992), | |
| Expression 3.222-1 (p114). | |
| This revision: 2021 May 11 | |
| Copyright (C) 2013-2021, NumFOCUS Foundation. | |
| Derived, with permission, from the SOFA library. See notes at end of file. | |
| """ | |
| > c_retval = ufunc.obl80(date1, date2) | |
| E numpy.core._exceptions._UFuncNoLoopError: ufunc 'obl80' did not contain a loop with signature matching types (<class 'numpy.dtype[float64]'>, <class 'numpy.dtype[int64]'>) -> None | |
| /nix/store/p3aipsvqn3rpf8c5z0fk1yfqwjkxvh5m-python3.10-pyerfa-2.0.0.1/lib/python3.10/site-packages/erfa/core.py:9623: UFuncTypeError | |
| ______ test_calculate_rotation_angle[fk4-sample_fits01.header--0.0810223] ______ | |
| region_frame = 'fk4', header_name = 'sample_fits01.header' | |
| rot_angle = -0.0810223 | |
| @pytest.mark.parametrize(("region_frame", "header_name", "rot_angle"), [ | |
| ('fk5', 'sample_fits01.header', 0.00505712), | |
| ('galactic', 'sample_fits01.header', -19.2328), | |
| ('fk4', 'sample_fits01.header', -0.0810223), | |
| ('fk5', 'sample_fits03.header', -2.16043), | |
| ]) | |
| def test_calculate_rotation_angle(region_frame, header_name, rot_angle): | |
| header = Header.fromtextfile(os.path.join(rootdir, header_name)) | |
| assert_allclose( | |
| > _calculate_rotation_angle(region_frame, header), rot_angle, | |
| atol=0.001 | |
| ) | |
| pyregion/tests/test_wcs.py:40: | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| pyregion/wcs_helper.py:68: in _calculate_rotation_angle | |
| origin=1).transform_to(region_frame) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/sky_coordinate.py:704: in transform_to | |
| new_coord = trans(self.frame, generic_frame) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/transformations.py:1575: in __call__ | |
| curr_coord = t(curr_coord, curr_toframe) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/transformations.py:1144: in __call__ | |
| return supcall(fromcoord, toframe) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/builtin_frames/fk4.py:206: in fk4_no_e_to_fk4 | |
| fk4_e_terms(fk4noecoord.equinox), u.dimensionless_unscaled, copy=False | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/builtin_frames/fk4.py:131: in fk4_e_terms | |
| o = earth.obliquity(equinox.jd, algorithm=1980) | |
| /nix/store/ibw6b5l4hiw9lfamy9gmn3bajzh3iqxx-python3.10-astropy-5.2/lib/python3.10/site-packages/astropy/coordinates/earth_orientation.py:110: in obliquity | |
| return np.rad2deg(erfa.obl80(jd, 0)) | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| date1 = 2433282.42345905, date2 = 0 | |
| def obl80(date1, date2): | |
| """ | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Parameters | |
| ---------- | |
| date1 : double array | |
| date2 : double array | |
| Returns | |
| ------- | |
| c_retval : double array | |
| Notes | |
| ----- | |
| Wraps ERFA function ``eraObl80``. The ERFA documentation is:: | |
| - - - - - - - - - | |
| e r a O b l 8 0 | |
| - - - - - - - - - | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Given: | |
| date1,date2 double TT as a 2-part Julian Date (Note 1) | |
| Returned (function value): | |
| double obliquity of the ecliptic (radians, Note 2) | |
| Notes: | |
| 1) The TT date date1+date2 is a Julian Date, apportioned in any | |
| convenient way between the two arguments. For example, | |
| JD(TT)=2450123.7 could be expressed in any of these ways, | |
| among others: | |
| date1 date2 | |
| 2450123.7 0.0 (JD method) | |
| 2451545.0 -1421.3 (J2000 method) | |
| 2400000.5 50123.2 (MJD method) | |
| 2450123.5 0.2 (date & time method) | |
| The JD method is the most natural and convenient to use in | |
| cases where the loss of several decimal digits of resolution | |
| is acceptable. The J2000 method is best matched to the way | |
| the argument is handled internally and will deliver the | |
| optimum resolution. The MJD method and the date & time methods | |
| are both good compromises between resolution and convenience. | |
| 2) The result is the angle between the ecliptic and mean equator of | |
| date date1+date2. | |
| Reference: | |
| Explanatory Supplement to the Astronomical Almanac, | |
| P. Kenneth Seidelmann (ed), University Science Books (1992), | |
| Expression 3.222-1 (p114). | |
| This revision: 2021 May 11 | |
| Copyright (C) 2013-2021, NumFOCUS Foundation. | |
| Derived, with permission, from the SOFA library. See notes at end of file. | |
| """ | |
| > c_retval = ufunc.obl80(date1, date2) | |
| E numpy.core._exceptions._UFuncNoLoopError: ufunc 'obl80' did not contain a loop with signature matching types (<class 'numpy.dtype[float64]'>, <class 'numpy.dtype[int64]'>) -> None | |
| /nix/store/p3aipsvqn3rpf8c5z0fk1yfqwjkxvh5m-python3.10-pyerfa-2.0.0.1/lib/python3.10/site-packages/erfa/core.py:9623: UFuncTypeError | |
| =============================== warnings summary =============================== | |
| build/lib.linux-x86_64-cpython-310/pyregion/tests/test_region.py::test_open_regions[test01.reg] | |
| /build/source/build/lib.linux-x86_64-cpython-310/pyregion/ds9_region_parser.py:107: UserWarning: Failed to parse : ascircle(171.10096,-59.250612,18.510811") # color=cyan | |
| warnings.warn("Failed to parse : " + l) | |
| -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html | |
| =========================== short test summary info ============================ | |
| FAILED pyregion/tests/test_region.py::test_region[test01_img.reg-test01_fk4.reg-sample_fits01.header] - numpy.core._exceptions._UFuncNoLoopError: ufunc 'obl80' did not contain a l... | |
| FAILED pyregion/tests/test_wcs.py::test_calculate_rotation_angle[fk4-sample_fits01.header--0.0810223] - numpy.core._exceptions._UFuncNoLoopError: ufunc 'obl80' did not contain a l... | |
| =================== 2 failed, 43 passed, 1 warning in 4.84s ==================== | |
| /nix/store/b09v23lirgvci3wzszh22mbkdfj0h0yq-stdenv-linux/setup: line 1582: pop_var_context: head of shell_variables not a function context |
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| Sourcing python-remove-tests-dir-hook | |
| Sourcing python-catch-conflicts-hook.sh | |
| Sourcing python-remove-bin-bytecode-hook.sh | |
| Sourcing setuptools-build-hook | |
| Using setuptoolsBuildPhase | |
| Using setuptoolsShellHook | |
| Sourcing pip-install-hook | |
| Using pipInstallPhase | |
| Sourcing python-imports-check-hook.sh | |
| Using pythonImportsCheckPhase | |
| Sourcing python-namespaces-hook | |
| Sourcing python-catch-conflicts-hook.sh | |
| Sourcing setuptools-check-hook | |
| Using setuptoolsCheckPhase | |
| Sourcing pytest-check-hook | |
| Using pytestCheckPhase | |
| Removing setuptoolsCheckPhase | |
| @nix { "action": "setPhase", "phase": "unpackPhase" } | |
| unpacking sources | |
| unpacking source archive /nix/store/w16vafwcgn2q9h2g2pkjbraxaw9d5qy7-source | |
| source root is source | |
| setting SOURCE_DATE_EPOCH to timestamp 315619200 of file source/setup.py | |
| @nix { "action": "setPhase", "phase": "patchPhase" } | |
| patching sources | |
| applying patch /nix/store/j4haznyszcqyvg7ig6wqhfiqw5sxnf07-082649730d353a0d0c0ee9619be1aa501aabba62.patch | |
| patching file pyregion/conftest.py | |
| applying patch /nix/store/wznwy3ad7vl4giqcnc70ky12bamxb8gp-c448a465dd56887979da62aec6138fc89bb37b19.patch | |
| patching file pyregion/wcs_converter.py | |
| @nix { "action": "setPhase", "phase": "configurePhase" } | |
| configuring | |
| no configure script, doing nothing | |
| @nix { "action": "setPhase", "phase": "buildPhase" } | |
| building | |
| Executing setuptoolsBuildPhase | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/setup_helpers.py:161: AstropyDeprecationWarning: The package argument to generate_version_py has been deprecated and will be removed in future. Specify the package name in setup.cfg instead | |
| warnings.warn('The package argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/setup_helpers.py:166: AstropyDeprecationWarning: The version argument to generate_version_py has been deprecated and will be removed in future. Specify the version number in setup.cfg instead | |
| warnings.warn('The version argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/setup_helpers.py:171: AstropyDeprecationWarning: The release argument to generate_version_py has been deprecated and will be removed in future. We now use the presence of the "dev" string in the version to determine whether this is a release | |
| warnings.warn('The release argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/version_helpers.py:239: AstropyDeprecationWarning: The packagename argument to generate_version_py has been deprecated and will be removed in future. Specify the package name in setup.cfg instead | |
| warnings.warn('The packagename argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/version_helpers.py:244: AstropyDeprecationWarning: The version argument to generate_version_py has been deprecated and will be removed in future. Specify the version number in setup.cfg instead | |
| warnings.warn('The version argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/version_helpers.py:249: AstropyDeprecationWarning: The release argument to generate_version_py has been deprecated and will be removed in future. We now use the presence of the "dev" string in the version to determine whether this is a release | |
| warnings.warn('The release argument to generate_version_py has ' | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/git_helpers.py:114: UserWarning: Error running git: [Errno 2] No such file or directory: 'git' | |
| warnings.warn('Error running git: ' + str(e)) | |
| /nix/store/4jwbf3rqnrkm4iv9l1g9zn13nfhc996c-python3.11-astropy-helpers-4.0.1/lib/python3.11/site-packages/astropy_helpers/setup_helpers.py:411: SetuptoolsDeprecationWarning: As setuptools moves its configuration towards `pyproject.toml`, | |
| `setuptools.config.read_configuration` became deprecated. | |
| For the time being, you can use the `setuptools.config.setupcfg` module | |
| to access a backward compatible API, but this module is provisional | |
| and might be removed in the future. | |
| conf = read_configuration(setup_cfg) | |
| /nix/store/p5vmzxk6wq1jgqgfqwixf8mr7aq2qra3-python3.11-setuptools-65.6.3/lib/python3.11/site-packages/setuptools/dist.py:316: DistDeprecationWarning: use_2to3 is ignored. | |
| warnings.warn(f"{attr} is ignored.", DistDeprecationWarning) | |
| running bdist_wheel | |
| running build | |
| running build_py | |
| creating build | |
| creating build/lib.linux-x86_64-cpython-311 | |
| creating build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/version.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/wcs_converter.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/conftest.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/wcs_helper.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/region_to_filter.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/region_numbers.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/physical_coordinate.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/parser_helper.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/mpl_helper.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/ds9_region_parser.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/ds9_attr_parser.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/core.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/_astropy_init.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| copying pyregion/__init__.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| creating build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_wcs.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_region_numbers.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_region.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_parser_helper.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_get_mask.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_ds9_region_parser.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_ds9_attr_parser.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/test_cube.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/setup_package.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/__init__.py -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| copying pyregion/tests/coveragerc -> build/lib.linux-x86_64-cpython-311/pyregion/tests | |
| creating build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test03_img.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test03_icrs.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test03_gal.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test03_fk5.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test03_ciao_physical.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test02_1_img.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_icrs.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk4.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test_text.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test_context.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli_wcs.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli_ciao.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test_annuli.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test04_img.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test02.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_print.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_mixed.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_img.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_gal.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5_sexagecimal.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_fk5_degree.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ds9_physical.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ciao_physical.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01_ciao.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test01.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test02_1_fk5.reg -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits04.header -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits03.header -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/test.header -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits02.header -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| copying pyregion/tests/data/sample_fits01.header -> build/lib.linux-x86_64-cpython-311/pyregion/tests/data | |
| running build_ext | |
| /nix/store/r85cm22i6058g4zj76w05rzvqwil6d2g-python3-3.11.1/lib/python3.11/importlib/__init__.py:169: UserWarning: The NumPy module was reloaded (imported a second time). This can in some cases result in small but subtle issues and is discouraged. | |
| _bootstrap._exec(spec, module) | |
| cythoning pyregion/_region_filter.pyx to pyregion/_region_filter.c | |
| /nix/store/vvigcwdg03jpm6bs24hd8g1wl7xhfh1s-python3.11-cython-0.29.33/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/source/pyregion/_region_filter.pyx | |
| tree = Parsing.p_module(s, pxd, full_module_name) | |
| building 'pyregion.compiler_version' extension | |
| creating build/temp.linux-x86_64-cpython-311 | |
| creating build/temp.linux-x86_64-cpython-311/pyregion | |
| gcc -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -I/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/include -fPIC -I/nix/store/r85cm22i6058g4zj76w05rzvqwil6d2g-python3-3.11.1/include/python3.11 -c pyregion/_compiler.c -o build/temp.linux-x86_64-cpython-311/pyregion/_compiler.o | |
| gcc -shared -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib build/temp.linux-x86_64-cpython-311/pyregion/_compiler.o -L/nix/store/r85cm22i6058g4zj76w05rzvqwil6d2g-python3-3.11.1/lib -o build/lib.linux-x86_64-cpython-311/pyregion/compiler_version.cpython-311-x86_64-linux-gnu.so | |
| building 'pyregion._region_filter' extension | |
| gcc -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -I/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/include -fPIC -I/nix/store/1g6bf72d5gna2kz1s1jqb5h8a8bpd9ac-python3.11-numpy-1.23.5/lib/python3.11/site-packages/numpy/core/include -I/nix/store/r85cm22i6058g4zj76w05rzvqwil6d2g-python3-3.11.1/include/python3.11 -c pyregion/_region_filter.c -o build/temp.linux-x86_64-cpython-311/pyregion/_region_filter.o -Wp,-w -Wno-unused-function | |
| gcc -shared -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.13/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.8/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.5.0/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.4.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.4.4/lib -L/nix/store/kaiinm7cjirmv4zd3pdqar23rsypfqlh-libxcrypt-4.4.33/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.23/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.40.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-8.2p1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.4/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-3.0.8/lib -L/nix/store/66fr4mlfnwym5dw4bx61xs7nb81q58cb-tzdata-2022g/lib build/temp.linux-x86_64-cpython-311/pyregion/_region_filter.o -L/nix/store/r85cm22i6058g4zj76w05rzvqwil6d2g-python3-3.11.1/lib -o build/lib.linux-x86_64-cpython-311/pyregion/_region_filter.cpython-311-x86_64-linux-gnu.so | |
| copying pyregion/cython_version.py -> build/lib.linux-x86_64-cpython-311/pyregion | |
| /nix/store/p5vmzxk6wq1jgqgfqwixf8mr7aq2qra3-python3.11-setuptools-65.6.3/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. | |
| warnings.warn( | |
| installing to build/bdist.linux-x86_64/wheel | |
| running install | |
| running install_lib | |
| creating build/bdist.linux-x86_64 | |
| creating build/bdist.linux-x86_64/wheel | |
| creating build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/cython_version.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/_region_filter.cpython-311-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/compiler_version.cpython-311-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/pyregion | |
| creating build/bdist.linux-x86_64/wheel/pyregion/tests | |
| creating build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/sample_fits01.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/sample_fits02.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/sample_fits03.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/sample_fits04.header -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test02_1_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_ciao.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_ciao_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_ds9_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_fk5_degree.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_fk5_sexagecimal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_gal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_mixed.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_print.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test02.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test04_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test_annuli.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test_annuli_ciao.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test_annuli_wcs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test_context.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test_text.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_fk4.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test01_icrs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test02_1_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test03_ciao_physical.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test03_fk5.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test03_gal.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test03_icrs.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/data/test03_img.reg -> build/bdist.linux-x86_64/wheel/pyregion/tests/data | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/coveragerc -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/__init__.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/setup_package.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_cube.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_ds9_attr_parser.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_ds9_region_parser.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_get_mask.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_parser_helper.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_region.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_region_numbers.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/tests/test_wcs.py -> build/bdist.linux-x86_64/wheel/pyregion/tests | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/__init__.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/_astropy_init.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/core.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/ds9_attr_parser.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/ds9_region_parser.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/mpl_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/parser_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/physical_coordinate.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/region_numbers.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/region_to_filter.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/wcs_helper.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/conftest.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/wcs_converter.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| copying build/lib.linux-x86_64-cpython-311/pyregion/version.py -> build/bdist.linux-x86_64/wheel/pyregion | |
| running install_egg_info | |
| running egg_info | |
| creating pyregion.egg-info | |
| writing pyregion.egg-info/PKG-INFO | |
| writing dependency_links to pyregion.egg-info/dependency_links.txt | |
| writing requirements to pyregion.egg-info/requires.txt | |
| writing top-level names to pyregion.egg-info/top_level.txt | |
| writing manifest file 'pyregion.egg-info/SOURCES.txt' | |
| reading manifest file 'pyregion.egg-info/SOURCES.txt' | |
| reading manifest template 'MANIFEST.in' | |
| warning: no files found matching '*' under directory 'licenses' | |
| warning: no files found matching '*' under directory 'cextern' | |
| warning: no files found matching '*' under directory 'scripts' | |
| no previously-included directories found matching 'build' | |
| no previously-included directories found matching 'docs/_build' | |
| no previously-included directories found matching 'docs/api' | |
| warning: no files found matching 'astropy_helpers/README.rst' | |
| warning: no files found matching 'astropy_helpers/CHANGES.rst' | |
| warning: no files found matching 'astropy_helpers/LICENSE.rst' | |
| warning: no files found matching '*' under directory 'astropy_helpers/licenses' | |
| warning: no files found matching 'astropy_helpers/ez_setup.py' | |
| warning: no files found matching 'astropy_helpers/ah_bootstrap.py' | |
| warning: no files found matching '*.py' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.pyx' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.c' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*.h' under directory 'astropy_helpers/astropy_helpers' | |
| warning: no files found matching '*' under directory 'astropy_helpers/astropy_helpers.egg-info' | |
| warning: no files found matching '*' under directory 'astropy_helpers/astropy_helpers/sphinx' | |
| no previously-included directories found matching 'astropy_helpers/build' | |
| no previously-included directories found matching 'astropy_helpers/astropy_helpers/tests' | |
| warning: no previously-included files matching '*.pyc' found anywhere in distribution | |
| warning: no previously-included files matching '*.o' found anywhere in distribution | |
| adding license file 'LICENSE' | |
| writing manifest file 'pyregion.egg-info/SOURCES.txt' | |
| Copying pyregion.egg-info to build/bdist.linux-x86_64/wheel/pyregion-2.1.1-py3.11.egg-info | |
| running install_scripts | |
| creating build/bdist.linux-x86_64/wheel/pyregion-2.1.1.dist-info/WHEEL | |
| creating 'dist/pyregion-2.1.1-cp311-cp311-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it | |
| adding 'pyregion/__init__.py' | |
| adding 'pyregion/_astropy_init.py' | |
| adding 'pyregion/_region_filter.cpython-311-x86_64-linux-gnu.so' | |
| adding 'pyregion/compiler_version.cpython-311-x86_64-linux-gnu.so' | |
| adding 'pyregion/conftest.py' | |
| adding 'pyregion/core.py' | |
| adding 'pyregion/cython_version.py' | |
| adding 'pyregion/ds9_attr_parser.py' | |
| adding 'pyregion/ds9_region_parser.py' | |
| adding 'pyregion/mpl_helper.py' | |
| adding 'pyregion/parser_helper.py' | |
| adding 'pyregion/physical_coordinate.py' | |
| adding 'pyregion/region_numbers.py' | |
| adding 'pyregion/region_to_filter.py' | |
| adding 'pyregion/version.py' | |
| adding 'pyregion/wcs_converter.py' | |
| adding 'pyregion/wcs_helper.py' | |
| adding 'pyregion/tests/__init__.py' | |
| adding 'pyregion/tests/coveragerc' | |
| adding 'pyregion/tests/setup_package.py' | |
| adding 'pyregion/tests/test_cube.py' | |
| adding 'pyregion/tests/test_ds9_attr_parser.py' | |
| adding 'pyregion/tests/test_ds9_region_parser.py' | |
| adding 'pyregion/tests/test_get_mask.py' | |
| adding 'pyregion/tests/test_parser_helper.py' | |
| adding 'pyregion/tests/test_region.py' | |
| adding 'pyregion/tests/test_region_numbers.py' | |
| adding 'pyregion/tests/test_wcs.py' | |
| adding 'pyregion/tests/data/sample_fits01.header' | |
| adding 'pyregion/tests/data/sample_fits02.header' | |
| adding 'pyregion/tests/data/sample_fits03.header' | |
| adding 'pyregion/tests/data/sample_fits04.header' | |
| adding 'pyregion/tests/data/test.header' | |
| adding 'pyregion/tests/data/test01.reg' | |
| adding 'pyregion/tests/data/test01_ciao.reg' | |
| adding 'pyregion/tests/data/test01_ciao_physical.reg' | |
| adding 'pyregion/tests/data/test01_ds9_physical.reg' | |
| adding 'pyregion/tests/data/test01_fk4.reg' | |
| adding 'pyregion/tests/data/test01_fk5.reg' | |
| adding 'pyregion/tests/data/test01_fk5_degree.reg' | |
| adding 'pyregion/tests/data/test01_fk5_sexagecimal.reg' | |
| adding 'pyregion/tests/data/test01_gal.reg' | |
| adding 'pyregion/tests/data/test01_icrs.reg' | |
| adding 'pyregion/tests/data/test01_img.reg' | |
| adding 'pyregion/tests/data/test01_mixed.reg' | |
| adding 'pyregion/tests/data/test01_print.reg' | |
| adding 'pyregion/tests/data/test02.reg' | |
| adding 'pyregion/tests/data/test02_1_fk5.reg' | |
| adding 'pyregion/tests/data/test02_1_img.reg' | |
| adding 'pyregion/tests/data/test03_ciao_physical.reg' | |
| adding 'pyregion/tests/data/test03_fk5.reg' | |
| adding 'pyregion/tests/data/test03_gal.reg' | |
| adding 'pyregion/tests/data/test03_icrs.reg' | |
| adding 'pyregion/tests/data/test03_img.reg' | |
| adding 'pyregion/tests/data/test04_img.reg' | |
| adding 'pyregion/tests/data/test_annuli.reg' | |
| adding 'pyregion/tests/data/test_annuli_ciao.reg' | |
| adding 'pyregion/tests/data/test_annuli_wcs.reg' | |
| adding 'pyregion/tests/data/test_context.reg' | |
| adding 'pyregion/tests/data/test_text.reg' | |
| adding 'pyregion-2.1.1.dist-info/LICENSE' | |
| adding 'pyregion-2.1.1.dist-info/METADATA' | |
| adding 'pyregion-2.1.1.dist-info/WHEEL' | |
| adding 'pyregion-2.1.1.dist-info/top_level.txt' | |
| adding 'pyregion-2.1.1.dist-info/RECORD' | |
| removing build/bdist.linux-x86_64/wheel | |
| Finished executing setuptoolsBuildPhase | |
| @nix { "action": "setPhase", "phase": "installPhase" } | |
| installing | |
| Executing pipInstallPhase | |
| /build/source/dist /build/source | |
| Processing ./pyregion-2.1.1-cp311-cp311-linux_x86_64.whl | |
| Requirement already satisfied: pyparsing>=2.0 in /nix/store/5mgg0dm9h354rf0xa0hmnrjxwcz2j3fq-python3.11-pyparsing-3.0.9/lib/python3.11/site-packages (from pyregion==2.1.1) (3.0.9) | |
| Requirement already satisfied: numpy in /nix/store/1g6bf72d5gna2kz1s1jqb5h8a8bpd9ac-python3.11-numpy-1.23.5/lib/python3.11/site-packages (from pyregion==2.1.1) (1.23.5) | |
| Requirement already satisfied: Cython in /nix/store/vvigcwdg03jpm6bs24hd8g1wl7xhfh1s-python3.11-cython-0.29.33/lib/python3.11/site-packages (from pyregion==2.1.1) (0.29.33) | |
| Requirement already satisfied: astropy>=1.0 in /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages (from pyregion==2.1.1) (5.2) | |
| Requirement already satisfied: pyerfa>=2.0 in /nix/store/l6r2z66z2gkx9r2agy49gifcscvj9a4r-python3.11-pyerfa-2.0.0.1/lib/python3.11/site-packages (from astropy>=1.0->pyregion==2.1.1) (2.0.0.1) | |
| Requirement already satisfied: PyYAML>=3.13 in /nix/store/vdbv8c700ip645xigh2ilg44nrl6kpxb-python3.11-pyyaml-6.0/lib/python3.11/site-packages (from astropy>=1.0->pyregion==2.1.1) (6.0) | |
| Requirement already satisfied: packaging>=19.0 in /nix/store/dz8w1cgvzbly1i8ikh3nxwssnlc190fi-python3.11-packaging-21.3/lib/python3.11/site-packages (from astropy>=1.0->pyregion==2.1.1) (21.3) | |
| Installing collected packages: pyregion | |
| Successfully installed pyregion-2.1.1 | |
| /build/source | |
| Finished executing pipInstallPhase | |
| @nix { "action": "setPhase", "phase": "pythonOutputDistPhase" } | |
| pythonOutputDistPhase | |
| Executing pythonOutputDistPhase | |
| Finished executing pythonOutputDistPhase | |
| @nix { "action": "setPhase", "phase": "fixupPhase" } | |
| post-installation fixup | |
| shrinking RPATHs of ELF executables and libraries in /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1 | |
| shrinking /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1/lib/python3.11/site-packages/pyregion/compiler_version.cpython-311-x86_64-linux-gnu.so | |
| shrinking /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1/lib/python3.11/site-packages/pyregion/_region_filter.cpython-311-x86_64-linux-gnu.so | |
| checking for references to /build/ in /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1... | |
| patching script interpreter paths in /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1 | |
| stripping (with command strip and flags -S) in /nix/store/b4liikshjld88a8v2g2rrsrbyqijl6l5-python3.11-pyregion-2.1.1/lib | |
| shrinking RPATHs of ELF executables and libraries in /nix/store/3537kgrg29ns9907li1r4zb8nfjwsziv-python3.11-pyregion-2.1.1-dist | |
| checking for references to /build/ in /nix/store/3537kgrg29ns9907li1r4zb8nfjwsziv-python3.11-pyregion-2.1.1-dist... | |
| patching script interpreter paths in /nix/store/3537kgrg29ns9907li1r4zb8nfjwsziv-python3.11-pyregion-2.1.1-dist | |
| Executing pythonRemoveTestsDir | |
| Finished executing pythonRemoveTestsDir | |
| @nix { "action": "setPhase", "phase": "installCheckPhase" } | |
| running install tests | |
| no Makefile or custom installCheckPhase, doing nothing | |
| @nix { "action": "setPhase", "phase": "pythonCatchConflictsPhase" } | |
| pythonCatchConflictsPhase | |
| @nix { "action": "setPhase", "phase": "pythonRemoveBinBytecodePhase" } | |
| pythonRemoveBinBytecodePhase | |
| @nix { "action": "setPhase", "phase": "pythonImportsCheckPhase" } | |
| pythonImportsCheckPhase | |
| Executing pythonImportsCheckPhase | |
| @nix { "action": "setPhase", "phase": "pytestCheckPhase" } | |
| pytestCheckPhase | |
| Executing pytestCheckPhase | |
| /build/source/build/lib.linux-x86_64-cpython-311 /build/source | |
| ============================= test session starts ============================== | |
| platform linux -- Python 3.11.1, pytest-7.2.0, pluggy-1.0.0 | |
| rootdir: /build/source, configfile: setup.cfg | |
| plugins: astropy-0.10.0, hypothesis-6.61.0, arraydiff-0.5.0, astropy-header-0.2.2, cov-4.0.0, doctestplus-0.12.1, filter-subpackage-0.1.2, mock-3.10.0, openfiles-0.5.0, remotedata-0.4.0 | |
| collecting ... | |
| collected 45 items | |
| pyregion/tests/test_cube.py . [ 2%] | |
| pyregion/tests/test_ds9_attr_parser.py ... [ 8%] | |
| pyregion/tests/test_ds9_region_parser.py .... [ 17%] | |
| pyregion/tests/test_get_mask.py . [ 20%] | |
| pyregion/tests/test_parser_helper.py . [ 22%] | |
| pyregion/tests/test_region.py ........F............. [ 71%] | |
| pyregion/tests/test_region_numbers.py ....... [ 86%] | |
| pyregion/tests/test_wcs.py ....F. [100%] | |
| =================================== FAILURES =================================== | |
| _______ test_region[test01_img.reg-test01_fk4.reg-sample_fits01.header] ________ | |
| ref_name = 'test01_img.reg', reg_name = 'test01_fk4.reg' | |
| header_name = 'sample_fits01.header' | |
| @pytest.mark.parametrize(("ref_name", "reg_name", "header_name"), [ | |
| ("test01_img.reg", "test01_fk5_sexagecimal.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_gal.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ds9_physical.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk5_degree.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_mixed.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ciao.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_ciao_physical.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk5.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_fk4.reg", "sample_fits01.header"), | |
| ("test01_img.reg", "test01_icrs.reg", "sample_fits01.header"), | |
| ("test02_1_img.reg", "test02_1_fk5.reg", "sample_fits02.header"), | |
| ("test_annuli.reg", "test_annuli_wcs.reg", "sample_fits01.header"), | |
| ("test03_img.reg", "test03_fk5.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_icrs.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_ciao_physical.reg", "sample_fits03.header"), | |
| ("test03_img.reg", "test03_gal.reg", "sample_fits03.header"), | |
| ]) | |
| def test_region(ref_name, reg_name, header_name): | |
| header = Header.fromtextfile(join(rootdir, header_name)) | |
| ref_region = pyregion_open(join(rootdir, ref_name)).as_imagecoord(header) | |
| > r = pyregion_open(join(rootdir, reg_name)).as_imagecoord(header) | |
| pyregion/tests/test_region.py:39: | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| pyregion/core.py:70: in as_imagecoord | |
| shape_list, comment_list = zip(*list(r)) | |
| pyregion/ds9_region_parser.py:187: in sky_to_image | |
| new_coords = convert_to_imagecoord(shape, header) | |
| pyregion/wcs_converter.py:93: in convert_to_imagecoord | |
| for x in old_coordinate.to_pixel(new_wcs, origin=1) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/sky_coordinate.py:1789: in to_pixel | |
| return skycoord_to_pixel(self, wcs=wcs, origin=origin, mode=mode) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/wcs/utils.py:575: in skycoord_to_pixel | |
| coords = coords.transform_to(frame) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/sky_coordinate.py:704: in transform_to | |
| new_coord = trans(self.frame, generic_frame) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/transformations.py:1575: in __call__ | |
| curr_coord = t(curr_coord, curr_toframe) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/transformations.py:1144: in __call__ | |
| return supcall(fromcoord, toframe) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/builtin_frames/fk4.py:156: in fk4_to_fk4_no_e | |
| u.Quantity(fk4_e_terms(fk4coord.equinox), u.dimensionless_unscaled, copy=False), | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/builtin_frames/fk4.py:131: in fk4_e_terms | |
| o = earth.obliquity(equinox.jd, algorithm=1980) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/earth_orientation.py:110: in obliquity | |
| return np.rad2deg(erfa.obl80(jd, 0)) | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| date1 = 2433282.42345905, date2 = 0 | |
| def obl80(date1, date2): | |
| """ | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Parameters | |
| ---------- | |
| date1 : double array | |
| date2 : double array | |
| Returns | |
| ------- | |
| c_retval : double array | |
| Notes | |
| ----- | |
| Wraps ERFA function ``eraObl80``. The ERFA documentation is:: | |
| - - - - - - - - - | |
| e r a O b l 8 0 | |
| - - - - - - - - - | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Given: | |
| date1,date2 double TT as a 2-part Julian Date (Note 1) | |
| Returned (function value): | |
| double obliquity of the ecliptic (radians, Note 2) | |
| Notes: | |
| 1) The TT date date1+date2 is a Julian Date, apportioned in any | |
| convenient way between the two arguments. For example, | |
| JD(TT)=2450123.7 could be expressed in any of these ways, | |
| among others: | |
| date1 date2 | |
| 2450123.7 0.0 (JD method) | |
| 2451545.0 -1421.3 (J2000 method) | |
| 2400000.5 50123.2 (MJD method) | |
| 2450123.5 0.2 (date & time method) | |
| The JD method is the most natural and convenient to use in | |
| cases where the loss of several decimal digits of resolution | |
| is acceptable. The J2000 method is best matched to the way | |
| the argument is handled internally and will deliver the | |
| optimum resolution. The MJD method and the date & time methods | |
| are both good compromises between resolution and convenience. | |
| 2) The result is the angle between the ecliptic and mean equator of | |
| date date1+date2. | |
| Reference: | |
| Explanatory Supplement to the Astronomical Almanac, | |
| P. Kenneth Seidelmann (ed), University Science Books (1992), | |
| Expression 3.222-1 (p114). | |
| This revision: 2021 May 11 | |
| Copyright (C) 2013-2021, NumFOCUS Foundation. | |
| Derived, with permission, from the SOFA library. See notes at end of file. | |
| """ | |
| > c_retval = ufunc.obl80(date1, date2) | |
| E ValueError: Invalid data-type for array | |
| /nix/store/l6r2z66z2gkx9r2agy49gifcscvj9a4r-python3.11-pyerfa-2.0.0.1/lib/python3.11/site-packages/erfa/core.py:9623: ValueError | |
| ______ test_calculate_rotation_angle[fk4-sample_fits01.header--0.0810223] ______ | |
| region_frame = 'fk4', header_name = 'sample_fits01.header' | |
| rot_angle = -0.0810223 | |
| @pytest.mark.parametrize(("region_frame", "header_name", "rot_angle"), [ | |
| ('fk5', 'sample_fits01.header', 0.00505712), | |
| ('galactic', 'sample_fits01.header', -19.2328), | |
| ('fk4', 'sample_fits01.header', -0.0810223), | |
| ('fk5', 'sample_fits03.header', -2.16043), | |
| ]) | |
| def test_calculate_rotation_angle(region_frame, header_name, rot_angle): | |
| header = Header.fromtextfile(os.path.join(rootdir, header_name)) | |
| assert_allclose( | |
| > _calculate_rotation_angle(region_frame, header), rot_angle, | |
| atol=0.001 | |
| ) | |
| pyregion/tests/test_wcs.py:40: | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| pyregion/wcs_helper.py:68: in _calculate_rotation_angle | |
| origin=1).transform_to(region_frame) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/sky_coordinate.py:704: in transform_to | |
| new_coord = trans(self.frame, generic_frame) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/transformations.py:1575: in __call__ | |
| curr_coord = t(curr_coord, curr_toframe) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/transformations.py:1144: in __call__ | |
| return supcall(fromcoord, toframe) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/builtin_frames/fk4.py:206: in fk4_no_e_to_fk4 | |
| fk4_e_terms(fk4noecoord.equinox), u.dimensionless_unscaled, copy=False | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/builtin_frames/fk4.py:131: in fk4_e_terms | |
| o = earth.obliquity(equinox.jd, algorithm=1980) | |
| /nix/store/fb27jicry4lqhalx6x3r6dn80nk1mpsi-python3.11-astropy-5.2/lib/python3.11/site-packages/astropy/coordinates/earth_orientation.py:110: in obliquity | |
| return np.rad2deg(erfa.obl80(jd, 0)) | |
| _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
| date1 = 2433282.42345905, date2 = 0 | |
| def obl80(date1, date2): | |
| """ | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Parameters | |
| ---------- | |
| date1 : double array | |
| date2 : double array | |
| Returns | |
| ------- | |
| c_retval : double array | |
| Notes | |
| ----- | |
| Wraps ERFA function ``eraObl80``. The ERFA documentation is:: | |
| - - - - - - - - - | |
| e r a O b l 8 0 | |
| - - - - - - - - - | |
| Mean obliquity of the ecliptic, IAU 1980 model. | |
| Given: | |
| date1,date2 double TT as a 2-part Julian Date (Note 1) | |
| Returned (function value): | |
| double obliquity of the ecliptic (radians, Note 2) | |
| Notes: | |
| 1) The TT date date1+date2 is a Julian Date, apportioned in any | |
| convenient way between the two arguments. For example, | |
| JD(TT)=2450123.7 could be expressed in any of these ways, | |
| among others: | |
| date1 date2 | |
| 2450123.7 0.0 (JD method) | |
| 2451545.0 -1421.3 (J2000 method) | |
| 2400000.5 50123.2 (MJD method) | |
| 2450123.5 0.2 (date & time method) | |
| The JD method is the most natural and convenient to use in | |
| cases where the loss of several decimal digits of resolution | |
| is acceptable. The J2000 method is best matched to the way | |
| the argument is handled internally and will deliver the | |
| optimum resolution. The MJD method and the date & time methods | |
| are both good compromises between resolution and convenience. | |
| 2) The result is the angle between the ecliptic and mean equator of | |
| date date1+date2. | |
| Reference: | |
| Explanatory Supplement to the Astronomical Almanac, | |
| P. Kenneth Seidelmann (ed), University Science Books (1992), | |
| Expression 3.222-1 (p114). | |
| This revision: 2021 May 11 | |
| Copyright (C) 2013-2021, NumFOCUS Foundation. | |
| Derived, with permission, from the SOFA library. See notes at end of file. | |
| """ | |
| > c_retval = ufunc.obl80(date1, date2) | |
| E ValueError: Invalid data-type for array | |
| /nix/store/l6r2z66z2gkx9r2agy49gifcscvj9a4r-python3.11-pyerfa-2.0.0.1/lib/python3.11/site-packages/erfa/core.py:9623: ValueError | |
| =============================== warnings summary =============================== | |
| build/lib.linux-x86_64-cpython-311/pyregion/tests/test_region.py::test_open_regions[test01.reg] | |
| /build/source/build/lib.linux-x86_64-cpython-311/pyregion/ds9_region_parser.py:107: UserWarning: Failed to parse : ascircle(171.10096,-59.250612,18.510811") # color=cyan | |
| warnings.warn("Failed to parse : " + l) | |
| -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html | |
| =========================== short test summary info ============================ | |
| FAILED pyregion/tests/test_region.py::test_region[test01_img.reg-test01_fk4.reg-sample_fits01.header] - ValueError: Invalid data-type for array | |
| FAILED pyregion/tests/test_wcs.py::test_calculate_rotation_angle[fk4-sample_fits01.header--0.0810223] - ValueError: Invalid data-type for array | |
| =================== 2 failed, 43 passed, 1 warning in 4.87s ==================== | |
| /nix/store/b09v23lirgvci3wzszh22mbkdfj0h0yq-stdenv-linux/setup: line 1582: pop_var_context: head of shell_variables not a function context |
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