Created
January 29, 2014 15:55
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polypeptide example
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feature_id | name | uniquename | type_id | fmin | fmax | type_name | |
------------+------------------------------+------------------------------------+---------+----------+----------+------------- | |
17711944 | Solyc01g112000.2.1 | mRNA:Solyc01g112000.2.1 | 22157 | 89896493 | 89898383 | mRNA | |
17711943 | Solyc01g112000.2 | gene:Solyc01g112000.2 | 22627 | 89896493 | 89898383 | gene | |
17711945 | exon:Solyc01g112000.2.1.1 | exon:Solyc01g112000.2.1.1 | 22070 | 89896493 | 89896528 | exon | |
17711946 | intron:Solyc01g112000.2.1.1 | intron:Solyc01g112000.2.1.1 | 22111 | 89896528 | 89896791 | intron | |
17711947 | exon:Solyc01g112000.2.1.2 | exon:Solyc01g112000.2.1.2 | 22070 | 89896791 | 89896911 | exon | |
18050281 | Solyc01g112000.2.1 | auto18050281 | 22027 | 89896799 | 89898180 | polypeptide | |
17711948 | intron:Solyc01g112000.2.1.2 | intron:Solyc01g112000.2.1.2 | 22111 | 89896911 | 89896990 | intron | |
17711949 | exon:Solyc01g112000.2.1.3 | exon:Solyc01g112000.2.1.3 | 22070 | 89896990 | 89897100 | exon | |
17711950 | intron:Solyc01g112000.2.1.3 | intron:Solyc01g112000.2.1.3 | 22111 | 89897100 | 89897182 | intron | |
17711951 | exon:Solyc01g112000.2.1.4 | exon:Solyc01g112000.2.1.4 | 22070 | 89897182 | 89897361 | exon | |
17711952 | intron:Solyc01g112000.2.1.4 | intron:Solyc01g112000.2.1.4 | 22111 | 89897361 | 89897710 | intron | |
17711953 | exon:Solyc01g112000.2.1.5 | exon:Solyc01g112000.2.1.5 | 22070 | 89897710 | 89897843 | exon | |
17711954 | intron:Solyc01g112000.2.1.5 | intron:Solyc01g112000.2.1.5 | 22111 | 89897843 | 89897928 | intron | |
17711955 | exon:Solyc01g112000.2.1.6 | exon:Solyc01g112000.2.1.6 | 22070 | 89897928 | 89898383 | exon | |
17711958 | exon:Solyc01g112010.2.1.7 | exon:Solyc01g112010.2.1.7 | 22070 | 89898591 | 89898903 | exon | |
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SQL: select feature.feature_id,feature.name,uniquename,type_id,fmin,fmax,cvterm.name as type_name from feature,featureloc,cvterm where feature.feature_id=featureloc.feature_id and feature.name like '%Solyc01g112%' and feature.type_id=cvterm.cvterm_id order by fmin;