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Query Builder test
/**
* Test Query builder.
*/
'use strict';
var _ = require('lodash');
var config = require('config');
var client = require('./lib/client').client;
var nav = require('./lib/nav/navigation')(client, config);
var micis = require('./lib/auth/micis')(client);
var should = require('should');
var sampleStudyId = '(MRN) VCALHOUN: [99-998] NITEST';
var sampleUrsis = ['M87120826', 'M87128533', 'M87100451', 'M87159685',
'M87181629', 'M53742922', 'M53790706', 'M53771006', 'M53739226',
'M53749098', 'M53708287', 'M53711867', 'M87168375'];
/**
* Set up a query.
*
* This manages fields in the "Select subjects" form section.
*
* @param {function} callback
* @param {object} options
* @return {object}
*/
var setupQuery = function (options, callback) {
var defaults = {
studyId: sampleStudyId,
subjectTagType: '',
subjectTags: [],
subjectType: '',
ursis: []
};
/**
* Sometimes the `options` argument is the callback.
*
* @todo Figure out a better lodash-y way to handle.
*/
if (options instanceof Function) {
callback = options;
options = {};
} else if (!(callback instanceof Function)) {
callback = _.noop;
}
options = _.extend(defaults, options);
if (
options.ursis.length ||
(options.subjectTags.length && options.subjectTagType)
) {
/**
* Click "Subjects appear in list" checkbox. This results in 2
* sub-options: direct URSI entry or "Subject Tags" selection.
*/
client
.scroll(0, 0)
.click('#optListOfSubjects')
.waitForVis('#ursiListDiv');
if (options.ursis.length) {
/** Option 1: direct URSI entry */
client
.click('#subject_list_type_ursi')
.setValue('#subjectListInput', options.ursis.join(' '));
} else {
/** Option 2: subject tags */
client
.click('#subject_list_type_tag')
.waitForVisible('#subject_list_tag_details')
.selectByVisibleText(
'#subject_list_tag_study_id',
options.studyId
)
.selectByVisibleText(
'#subject_list_tag_id',
options.subjectTagType
)
.setValue('#subjectListInput', options.subjectTags.join(' '));
}
/** Click out of the text field to trigger the URSI query */
client.click('#ursiListDiv fieldset');
} else if (options.subjectType) {
/**
* Click "Subjects by subject type", select a study and subject type.
*/
client
.click('#subjectTypeCheckbox')
.selectByVisibleText(
'#subjectTypeStudySelectBox',
options.studyId
)
.waitForVis('#selectTypeDiv')
.selectByVisibleText(
'#subjectTypeSelectBox',
options.subjectType
);
} else {
/**
* Click "Subjects are enrolled in a study" and enroll in
*/
client
.click('#optAllSubjectsInStudy')
.selectByVisibleText(
'#studySelectBox',
options.studyId
);
}
return client
.waitForPaginationComplete()
.waitForText('#windowPreview')
.getText('#windowPreview', function (err, res) {
if (err) {
throw err;
}
/**
* Make sure there's at least one URSI in the "Preview of
* selected" pane.
*/
should(res).match(/^M\d+/g);
})
.call(callback);
};
/**
* Add field(s) to query data.
*
* @param {object} options
* @return {undefined}
*/
var addFieldsToQuery = function (options) {
/** Test to ensure value is in table */
var testTableRow = function (err, res) {
if (err) {
throw err;
}
should(res).match(new RegExp(options.values[i]));
};
for (var i = 0, il = options.values.length; i < il; i++) {
client
.selectByVisibleText(options.select, options.values[i])
.click(options.button)
/**
* The first `tr` is always used as a heading. Start on the next.
*/
.waitForExist(options.table + ' tr:nth-of-type(' + (i + 2) + ')')
.getText(
options.table + ' tr:nth-of-type(' + (i + 2) + ')',
testTableRow
);
}
};
/**
* Set up demographic data in the "Data Criteria" form section.
*/
var setupDemograpicData = function (callback) {
callback = callback instanceof Function ? callback : _.noop;
return client
.moveToObject('#optDemoDataOutput')
.click('#optDemoDataOutput')
.waitForVis('#demoDataDiv')
.selectByVisibleText(
'select[name="selDemoStudy"]',
sampleStudyId,
function (err) {
if (err) {
throw err;
}
addFieldsToQuery({
select: 'select[name="selDemoField"]',
button: '#btnDemoAddList',
table: '#outputDemoRows',
values: ['Gender', 'Subject Type']
});
}
)
.call(callback);
};
var setupAssessmentData = function (callback) {
callback = callback instanceof Function ? callback : _.noop;
return client
.moveToObject('#optAsmtDataOutput')
.click('#optAsmtDataOutput')
.waitForVis('#asmtDataDiv')
.selectByVisibleText(
'#asmtDataDiv select[name=selStudy]',
sampleStudyId
)
.waitForExist(
'#asmtDataDiv select[name=selProtocol] option[value="simple test"]',
1500
)
.selectByVisibleText(
'#asmtDataDiv select[name=selInstrument]',
'simple test'
)
.waitForExist(
'select[name=selField] option:nth-child(2)',
1500,
function (err) {
if (err) {
throw err;
}
addFieldsToQuery({
select: 'select[name=selField]',
button: '#btnAddList',
values: ['All Fields'],
table: '#outputRows'
});
}
)
.call(callback);
};
var setupScanData = function (callback) {
callback = callback instanceof Function ? callback : _.noop;
return client
.moveToObject('#optScanDataOutput')
.click('#optScanDataOutput')
.waitForVis('#scanDataDiv')
.selectByVisibleText(
'select[name=selScanStudy]',
'(MRN) JBUSTILLO: [08-049] FIRST'
)
/** Wait for the `select` to be populated with the study's protocols. */
.waitForExist(
'select[name=selProtocol] option[value=mprage_5e]',
1500,
function (err) {
if (err) {
throw err;
}
addFieldsToQuery({
select: 'select[name=selProtocol]',
button: '#btnDataAddProtList',
values: ['mprage_5e', 'mprage_5e_rms'],
table: '#queryOutputProtRows'
});
}
)
.call(callback);
};
/**
* Preview and export.
*/
var previewAndExport = function (options, callback) {
if (_.isFunction(options)) {
callback = options;
options = {};
} else if (!_.isFunction(callback)) {
callback = _.noop;
}
var defaults = {
delimiter: 'comma',
isAssessment: false,
isLegacy: false
};
var delimiterSelector;
var exportButtonSelector;
options = _.extend(defaults, options);
client
.click('#btnPreview')
/**
* Hi.
*
* There's some twisted DOM state logic that prevents the page from
* being used while running Selenium tests. The modal UI, enclosed in
* `div.tmask` and `div.tbox` appears to be the culprit. Removing them
* entirely completely fixes the problem.
*/
.executeAsync(function (done) {
[].forEach.call(window.document.querySelectorAll('.tmask, .tbox'), function (node) {
// console.log(node);
node.parentElement.removeChild(node);
});
done();
})
.waitForText('#resultsarea', 10000)
.getText('#step3 .frmHeaderText', function (err, res) {
if (err) {
throw err;
} else if (res.trim() === 'Preview Finished') {
/** It's assessment data. Results are output
* differently, check appropriately.
*/
client.getText('#resultsarea', function (err, res) {
if (err) {
throw err;
}
should(res).match(/Number of Assessment Records Found: \d+/);
});
} else {
/**
* It's regular data. Check for matches in `.frmHeaderText` and
* the table.
*/
should(res).match(/Results: \d+/);
/**
* Confirm the results area's rows has content. The first row
* serves as table headers, so results should be > 2.
*/
client.elements('#resultsarea tr', function (err, res) {
if (err) {
throw err;
}
should(res.value.length).be.above(1);
});
}
})
.click('input[name=btnExport]')
.scroll(0, 0);
if (options.isLegacy) {
client
.click('#safeExportButtons input[value*="Legacy Export"]')
.waitForVis('#delimiters')
.scroll(0, 0);
}
exportButtonSelector = (options.isAssessment && !options.isLegacy) ?
'#safeExportDashboard input[type=button]' :
'#frmDnlLink input[name=btnExport]';
delimiterSelector = (options.isAssessment && !options.isLegacy) ?
'#safeDelimiters' :
'#delimiters';
delimiterSelector += options.delimiter === 'tab' ?
' input[value*="\\t"]' :
' input[value=","]';
return client
.click(delimiterSelector)
.click(exportButtonSelector)
.call(callback);
};
var goBack = function (callback) {
callback = _.isFunction(callback) ? callback : _.noop;
return nav.goToQueryBuilder(callback);
};
describe('Query Builder', function () {
this.timeout(config.defaultTimeout);
before('initialize', function (done) {
client.clientReady.then(function boot() {
if (!micis.loggedOn) {
micis.logon();
}
nav.goToQueryBuilder(done);
});
});
/**
* Test output of demographic data.
*
* Subject selection via:
*
* * Direct URSIs
* * A subject tag
*
* For each subject selection, sample demographic data with:
*
* * "Gender" label
* * "Subject Type" label
*/
describe('Demographic Data', function () {
/**
* Direct URSIs
*/
describe('export via direct URSIs', function () {
it('should set up', _.partialRight(setupQuery, {
ursis: sampleUrsis
}));
it('should setup demo data', setupDemograpicData);
it('should preview and export', previewAndExport);
});
/**
* By subject tag
*/
describe('export via subject tag', function () {
before(goBack);
it('should set up', _.partial(setupQuery, {
subjectTagType: 'Temporary Subject ID',
subjectTags: ['6001']
}));
it('should setup demographic data', setupDemograpicData);
it('should preview and export', previewAndExport);
});
});
/**
* Test output of assessment data.
*
* Steps:
*
* 1. Choose "NITEST" (the helper function's default) for subject
* selection.
* 2. Choose "NITEST" for the particular assessment data
* 3. Leave assessment defaults (double entry, no date filters, all
* instruments and all visits)
* 4. Select "All Fields" under "Fields" dropdown
*
* Two output modes must be tested:
*
* * Select comma, leave other stuff. Click “Begin export”
* * Click legacy export, reselect comma, Click Export
*/
describe('Assessment Data', function () {
/**
* Standard export
*/
describe('export via standard export', function () {
before(goBack);
it('should set up', setupQuery);
it('should setup assessment data', setupAssessmentData);
it('should preview and export', function (done) {
previewAndExport({isAssessment: true}).pause(15000).call(done);
});
});
/**
* Legacy export
*/
describe('export via legacy export', function () {
before(goBack);
it('should set up', setupQuery);
it('should setup assessment data', setupAssessmentData);
it('should preview and export', _.partialRight(previewAndExport, {
delimiter: 'tab',
isAssessment: true,
isLegacy: true
}));
});
});
/**
* Test output of scan data.
*/
describe('Scan Data', function () {
before(goBack);
after(goBack);
/**
* Use a different subject selection:
*
* 1. Choose "Subjects By Type:"
* 2. Choose "JBUSTILLO's 'First'" study
* 3. Choose "First Episode Patient" subject type
*/
it('should set up', _.partialRight(setupQuery, {
studyId: '(MRN) JBUSTILLO: [08-049] FIRST',
subjectType: 'First Episode Patient'
}));
it('should setup scan data', setupScanData);
it('should preview and export', previewAndExport);
});
});
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