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@syhw
Created September 3, 2019 04:40
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#!/bin/bash
# tmux requires unrecognized OSC sequences to be wrapped with DCS tmux;
# <sequence> ST, and for all ESCs in <sequence> to be replaced with ESC ESC. It
# only accepts ESC backslash for ST.
function print_osc() {
if [[ -n $TERM ]] ; then
printf "\033Ptmux;\033\033]"
else
printf "\033]"
fi
}
function print_csi() {
printf "\033["
}
# More of the tmux workaround described above.
function print_st() {
if [[ -n $TERM ]] ; then
printf "\a\033\\"
else
printf "\a"
fi
}
# Return the height of the image, or 200 if imagemagick is unavailable.
function get_height() {
identify -format "%h" - 2>/dev/null || echo 200
}
# print_image filename inline base64contents print_filename
# filename: Filename to convey to client
# inline: 0 or 1
# base64contents: Base64-encoded contents
# print_filename: If non-empty, print the filename
# before outputting the image
function print_image() {
VERSION=$(base64 --version 2>&1)
if [[ "$VERSION" =~ fourmilab ]]; then
BASE64ARG=-d
elif [[ "$VERSION" =~ GNU ]]; then
BASE64ARG=-di
else
BASE64ARG=-D
fi
local -i HEIGHT=$(printf "%s" "$3" | base64 $BASE64ARG | get_height)
HEIGHT=$(( (HEIGHT + 19) / 20 ))
for (( I = 0; I < $HEIGHT; I++ )); do
printf "\n"
done
print_csi
printf "?25l"
print_csi
printf "${HEIGHT}F"
print_osc
printf '1337;File='
if [[ -n "$1" ]]; then
printf 'name='`printf "%s" "$1" | base64`";"
fi
printf "%s" "$3" | base64 $BASE64ARG | wc -c | awk '{printf "size=%d",$1}'
printf ";inline=$2"
printf ";height=$HEIGHT"
printf ":"
printf "%s" "$3"
print_st
printf '\n'
if [[ -n "$4" ]]; then
echo $1
fi
print_csi
printf "${HEIGHT}E"
print_csi
printf "?25h"
}
function error() {
echo "ERROR: $*" 1>&2
}
function show_help() {
echo "Usage: imgcat [-p] filename ..." 1>& 2
echo " or: cat filename | imgcat" 1>& 2
}
## Main
if [ -t 0 ]; then
has_stdin=f
else
has_stdin=t
fi
# Show help if no arguments and no stdin.
if [ $has_stdin = f -a $# -eq 0 ]; then
show_help
exit
fi
# Look for command line flags.
while [ $# -gt 0 ]; do
case "$1" in
-h|--h|--help)
show_help
exit
;;
-p|--p|--print)
print_filename=1
;;
-*)
error "Unknown option flag: $1"
show_help
exit 1
;;
*)
if [ -r "$1" ] ; then
has_stdin=f
print_image "$1" 1 "$(base64 < "$1")" "$print_filename"
else
error "imgcat: $1: No such file or directory"
exit 2
fi
;;
esac
shift
done
# Read and print stdin
if [ $has_stdin = t ]; then
print_image "" 1 "$(cat | base64)" ""
fi
exit 0
#!/public/apps/anaconda3/5.0.1/bin/python
usage="""
Usage: streams_plot [series_separator] [-h|-bar|-line|-linesmooth|-lineexpsmooth|-bardelta] < data
It will output a png on stdout, that you can redirect or pipe.
Default series_separator is END (the string).
Default plotting is line.
Simple line example:
echo "lala\n1\n2\n3\n4\nEND\npo\n4\n3\n2\n1\n0\n-1\nEND" | streams_plot | itc
Bar plot with xticks (note that xticks are optional and only the longest sequence of ticks will be used):
echo "lala\n1\n2\n3\n4\nEND\npo\n4 a\n3 b\n2 c\n1 d\nEND" | streams_plot -bar | itc
Line plot with xticks:
echo "lala\n1 a\n2 b\n3 c\n4 d\nEND\npo\n4 a\n3 b\n2 c\n1 d\n-2 e\nEND" | streams_plot | itc
Line example with value, bottom, top (e.g. min, max, or value-stddev and value+stddev):
echo "lala\n1 0.9 1.1\n2 1.5 2.2\n3 2.6 2.9\n4\nEND\npo\n4\n3\n2\n1\n0\n-1\nEND" | streams_plot | itc
"""
### another more complicated example:
### { echo "master"; ./scripts/ladder/ladder -a -o all --output /checkpoint02/gab/ladderoutput --sort-by op -n master-sep-13 | rg -o "\(\d+%\)" | sed 's/[^0-9]//g'; echo "END"; echo "overlord scouting"; ./scripts/ladder/ladder -a -o all --output /checkpoint02/gab/ladderoutput --sort-by op -n overlord-scouting-sep-13-2 | sed 's/Against//' | rg "\(\d+%\)" | awk '{print $8,$1}' | sed 's/[()%]//g'; echo "END" } | streams_plot -bardelta | itc
import sys, math
import numpy as np
from collections import OrderedDict
import matplotlib as mpl
mpl.use('Agg')
import matplotlib.cm as cmx
import matplotlib.colors as colors
from matplotlib import pyplot as plt
#plt.style.use('fivethirtyeight')
#plt.style.use('dark_background')
plt.style.use('ggplot')
plt.rcParams['font.size'] = 10
plt.rcParams['axes.labelsize'] = 10
plt.rcParams['axes.labelweight'] = 'bold'
plt.rcParams['axes.titlesize'] = 10
plt.rcParams['xtick.labelsize'] = 8
plt.rcParams['ytick.labelsize'] = 8
plt.rcParams['legend.fontsize'] = 10
plt.rcParams['figure.titlesize'] = 12
def moving_average(a, n=10):
if n > len(a):
n = len(a) - 1
ret = np.cumsum(a, dtype=float)
ret[n:] = ret[n:] - ret[:-n]
return ret[n - 1:] / n
def expdecay_average(a, gamma=0.99):
ret = np.zeros_like(a)
ret[0] = a[0]
for i in range(1, ret.shape[0]):
ret[i] = ret[i-1] * gamma + a[i] * (1.0-gamma)
return ret
endofstream = 'END'
plottype = 'line'
if len(sys.argv) > 1:
for argv in sys.argv[1:]:
if "-" in argv:
if argv == "-h":
sys.stderr.write(usage + '\n')
sys.exit(0)
else:
plottype = argv[1:]
else:
endofstream = argv
d = OrderedDict() # key -> values
dfill = OrderedDict() # key -> (min, max)
ck = ''
xticks = []
tmpxticks = []
for line in sys.stdin:
tmp = line.rstrip().strip()
if tmp == '' or tmp == 'nan':
continue
try:
t = tmp.split()
d.setdefault(ck, []).append(float(t[0]))
# TODO add t[1] t[2] when existing
if len(t) > 1:
if len(t) == 3: # y ymin ymax
try:
dfill.setdefault(ck, [[], []])[0].append(float(t[1]))
dfill[ck][1].append(float(t[2]))
except ValueError: # not a number on t[1:]
tmpxticks.append(' '.join(t[1:]))
else:
tmpxticks.append(' '.join(t[1:]))
except ValueError:
if ck == '':
ck = tmp
else:
sys.stderr.write(ck + '\n')
if tmp == endofstream:
if len(tmpxticks) > len(xticks):
xticks = tmpxticks
tmpxticks = []
ck = ''
if len(d[ck]) == 0:
d.pop(ck)
### moving averaging
if plottype == 'linesmooth':
n = 100
for k, v in d.items():
d[k] = moving_average(v, n)
xticks = xticks[n-1:]
### exponentially decaying averaging
if plottype == 'lineexpsmooth':
for k, v in d.items():
d[k] = expdecay_average(v, 0.99)
### plot size
L = max([len(v) for v in d.values()])
fig, ax = plt.subplots()
fig.set_size_inches(12, 7)
### bardelta
if plottype == 'bardelta':
sys.stderr.write("!!! doing a bar plot that does first series minus second series and ignores the rest !!!\n")
plottype = 'bar'
i = 0
a, b = [], []
for k, v in d.items():
if i == 0:
a = v
elif i == 1:
b = v
i += 1
delta = np.array(b) - np.array(a)
d.clear()
d['delta'] = delta
### colors and linestyles
bar_width = 0.80 / len(d)
linestyles = ['-', '--', '-.']
hatchstyles = ['+', '\\', 'O', '/', '.']
if len(d) <= 10:
linestyles = ['-']
hatchstyles = [' ']
lls = len(linestyles)
lhs = len(hatchstyles)
numstyles = lls
if plottype[:3] == 'bar':
numstyles = lhs
csmap = cmx.ScalarMappable(norm=colors.Normalize(vmin=0, vmax=math.ceil((len(d)-1)/numstyles)), cmap=plt.get_cmap('plasma')) # could use vmax=len(d)-1 and csmap.to_rgba(i)
if len(d) <= 10*numstyles:
csmap = cmx.ScalarMappable(norm=colors.Normalize(vmin=0, vmax=10), cmap=plt.get_cmap('tab10'))
### actual plotting
for i, (k, v) in enumerate(d.items()):
ind = np.arange(len(v))
if plottype[:4] == 'line':
ax.plot(ind, v, linestyles[i%lls], label=k, color=csmap.to_rgba(i//lls), linewidth=2.0)
if k in dfill:
ax.fill_between(ind, dfill[k][0], dfill[k][1], alpha=0.2)
elif plottype == 'bar':
ax.bar(ind + i*bar_width, v, bar_width, label=k, color=csmap.to_rgba(i//lhs), hatch=hatchstyles[i%lhs])
if len(xticks) > 0:
if plottype[:4] == 'line':
plt.xticks(ind, xticks, rotation='vertical')
elif plottype == 'bar':
plt.xticks(ind + 0.40, xticks, rotation='vertical')
handles, labels = ax.get_legend_handles_labels()
lgd = ax.legend(handles, labels, loc='center left', bbox_to_anchor=(1, 0.5))
#plt.tight_layout()
if sys.version_info[0] >= 3:
plt.savefig(sys.stdout.buffer, bbox_extra_artists=(lgd,), bbox_inches='tight')
else:
plt.savefig(sys.stdout, bbox_extra_artists=(lgd,), bbox_inches='tight')
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