Jupyter HTML template for "html_with_lenvs" for local viewing

createreport.sh

#!/bin/bash
# Create report from juptyer notebook for local viewing (no internet)
# with support for the nbextensions
# - latex_envs
# - hide_input
#
# Download the following javascript projects and place them
# into the destination directory with macthing directory names.
# - font-awesome-4.7.0
# - jquery-2.0.3
# - jquery-ui-1.11.4
# - jquery-ui-1.9.1
# - jquery-ui-themes-1.12.1
# - latex_envs
# - marked-0.3.5
# - MathJax-2.7.4
# - nbextensions
# - requirejs-2.1.10

if [[ "$1" ]]; then
    destpath=$1
else
    destpath="./"
fi
destname=$(date +%y-%m-%d)_report.html
dest=${destpath}${destname}

mkdir -pv "${destpath}"

jupyter nbconvert "$1" --to html_with_lenvs \
                       --no-prompt \
                       --template ./jupyter_report.tpl \
                       --output "${dest}"
                       # --HTMLExporter.exclude_input=True

# Replace internet links with local ones
sed -i -e 's/https:\/\/cdnjs.cloudflare.com\/ajax\/libs\/require.js\/2.1.10\/require.min.js/.\/requirejs-2.1.10\/require.js/g' "${dest}"
sed -i -e 's/https:\/\/cdnjs.cloudflare.com\/ajax\/libs\/jquery\/2.0.3\/jquery.min.js/.\/jquery-2.0.3\/jquery.min.js/g' "${dest}"
sed -i -e 's/https:\/\/cdnjs.cloudflare.com\/ajax\/libs\/mathjax\/2.7.1\/MathJax.js?config=TeX-AMS_HTML/.\/MathJax-2.7.4\/MathJax.js\?config=TeX-AMS_HTML/g' "${dest}"

jupyter_report.tpl

{%- extends 'full.tpl' -%}

<!-- Copied from nbextensions.tpl (extending did not work) --->

{% block input_group -%}
{%- if cell.metadata.hide_input or nb.metadata.hide_input -%}
{%- else -%}
{{ super() }}
{%- endif -%}
{% endblock input_group %}

{% block output_group -%}
{%- if cell.metadata.hide_output -%}
{%- else -%}
    {{ super() }}
{%- endif -%}
{% endblock output_group %}

{% block output_area_prompt %}
{%- if cell.metadata.hide_input or nb.metadata.hide_input -%}
    <div class="prompt"> </div>
{%- else -%}
    {{ super() }}
{%- endif -%}
{% endblock output_area_prompt %}



{%- block html_head -%}

  <meta charset="utf-8"/>

<!-- javascript from CDN for conversion -->
  <script src="./marked-0.3.5/marked.min.js"></script>



{% if nb['metadata']['latex_envs']['eqLabelWithNumbers'] == True %}
<script type="text/x-mathjax-config">
// make sure that equations numbers are enabled
MathJax.Hub.Config({ TeX: { equationNumbers: {
    autoNumber: "AMS", // All AMS equations are numbered
    useLabelIds: true, // labels as ids
    // format the equation number - uses an offset eqNumInitial (default 0)
    formatNumber: function (n) {return String(Number(n)+Number({{nb['metadata']['latex_envs']['eqNumInitial']}})-1)}
    } }
});
</script>
{% else %}
<script type="text/x-mathjax-config">
// make sure that equations numbers are enabled
MathJax.Hub.Config({ TeX: { equationNumbers: {
    autoNumber: "none", // All AMS equations are numbered
    useLabelIds: true, // labels as ids
    } }
});
</script>
{% endif %}


{{ super() }}


<link rel="stylesheet" href="./jquery-ui-themes-1.12.1/jquery-ui.css">
<script type="text/javascript" src="./jquery-ui-1.9.1/ui/jquery-ui.js"></script>



<!-- stylesheet from CDN -->
<link rel="stylesheet" type="text/css" href="./font-awesome-4.7.0/css/font-awesome.min.css">
<link rel="stylesheet" type="text/css" href="./latex_envs/latex_envs.css">

<!-- Custom stylesheet, it must be in the same directory as the html file -->
<link rel="stylesheet" href="custom.css">

<!-- Load mathjax
<script src="https://rawgit.com/ipython-contrib/jupyter_contrib_nbextensions/master/src/jupyter_contrib_nbextensions/nbextensions/latex_envs/thmsInNb4.js"></script>
-->
<script type="text/javascript"  src="./latex_envs/thmsInNb4.js"> </script>

<!-- for toc2 -->
<link rel="stylesheet" type="text/css" href="./nbextensions/toc2/main.css">

<link rel="stylesheet" type="text/css" href="./font-awesome-4.7.0/css/font-awesome.min.css">

<script src="./nbextensions/toc2/toc2.js"></script>

<script>
$( document ).ready(function(){

        //Value of configuration variables, some taken from the notebook's metada.
        eqNum = 0; // begins equation numbering at eqNum+1
        eqLabelWithNumbers = "{{nb['metadata']['latex_envs']['eqLabelWithNumbers']}}"=="True" ? true : false; //if true, label equations with equation numbers;
                                       //otherwise using the tag specified by \label
        conversion_to_html = false;
        current_cit=1;
        cite_by='key';  //only number and key are supported
        //var document={}
        document.bibliography={};

        // Read environment map config
        initmap();
        // Read user envs config, if specified
        {% if nb['metadata']['latex_envs']['user_envs_cfg'] == True %}
                var data = {{ include_userenvs_cfg() }}
                environmentMap = $.extend(true,{}, environmentInitialMap,data)
        {% else %}
                environmentMap = $.extend(true,{}, environmentInitialMap)
        {% endif %}

        // fire the main function with these parameters
        var html_to_analyse = $('body').html()
        var html_converted = thmsInNbConv(marked,html_to_analyse);
        html_converted = html_converted.replace(/%[\S\t ]*<\/p>/gm,"</p>")
        $('body').html(html_converted)
        // Show/hide anchors
        var labels_anchors = "{{nb['metadata']['latex_envs']['labels_anchors']}}"=="True" ? true : false;
        $('.latex_label_anchor').toggle(labels_anchors)
        // Number all environments
        report_style_numbering = "{{nb['metadata']['latex_envs']['report_style_numbering']}}"=="True" ? true : false;
        reset_counters();
        renumberAllEnvs();


        // toc2
        var cfg = {{ nb.get('metadata', {}).get('toc', {})|tojson|safe }};
        // fire the main function with these parameters
        require(['nbextensions/toc2/toc2'], function (toc2) {
            toc2.table_of_contents(cfg);
        });
    });

</script>

<!-- Larger figures -->
<style type="text/css">
    div.output_subarea {
        max-width: 100%!important;
    }
</style>

<!-- Remove right margin for lists -->
<style>
    .rendered_html ol {
        margin-right: 0!important;
    }
</style>

{%- endblock html_head -%}

{% block body %}

{% if nb['metadata']['latex_envs']['latex_user_defs'] == True %}
<div id='latex_user_defs'>
        {{ include_latexdefs('latexdefs.tex') }}
</div>
{% endif %}

{{ super() }}

{%- endblock body %}

{% block footer %}
</html>
{% endblock footer %}