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@@ -1,1 +1,1 @@ | |
/* | |
* launcher.cc | |
* | |
* Copyright (C) 2009-13 by RStudio, Inc. | |
* | |
* This program is licensed to you under the terms of version 3 of the | |
* GNU Affero General Public License. This program is distributed WITHOUT | |
* ANY EXPRESS OR IMPLIED WARRANTY, INCLUDING THOSE OF NON-INFRINGEMENT, | |
* MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. Please refer to the |
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library("ggtree") | |
library("dplyr") | |
library("colorspace") | |
#Load Tree data | |
hc_tree<-structure(list(edge = structure(c(11L, 11L, 12L, 13L, 14L, 15L, | |
15L, 14L, 13L, 16L, 17L, 18L, 19L, 19L, 18L, 17L, 16L, 12L, 1L, | |
12L, 13L, 14L, 15L, 2L, 3L, 4L, 16L, 17L, 18L, 19L, 5L, 6L, 7L, | |
8L, 9L, 10L), .Dim = c(18L, 2L)), Nnode = 9L, tip.label = c("XPA.85.007", | |
"XPA.85.002", "XPA.85.001", "XPA.85.009", "XPA.85.013", "XPA.85.012", |
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### Install postgres using Homebrew | |
nauru:~ kaiju$ brew install postgres | |
==> Downloading http://ftp.postgresql.org/pub/source/v9.2.4/postgresql-9.2.4.tar.bz2 | |
Already downloaded: /Library/Caches/Homebrew/postgresql-9.2.4.tar.bz2 | |
==> Patching | |
patching file src/pl/plpython/Makefile | |
patching file contrib/uuid-ossp/uuid-ossp.c | |
==> ./configure --prefix=/usr/local/Cellar/postgresql/9.2.4 --datadir=/usr/local/Cellar/postgresql/9.2.4/share/postgresql --docdir=/usr/local/Cellar/postgresql/9.2.4/share/doc/postgresql --enable-thread-safety | |
==> make install-world |
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$ ./configure --with-apxs=/usr/local/Cellar/httpd/2.2.25/sbin/apxs --disable-framework | |
checking Apache version... 2.2.25 | |
checking for python... /usr/local/bin/python | |
configure: creating ./config.status | |
config.status: creating Makefile | |
$ make | |
26 warnings generated. | |
/usr/local/Cellar/httpd/2.2.25/share/apache2/build/libtool --silent --mode=link cc -o mod_wsgi.la -rpath /usr/local/Cellar/httpd/2.2.25/libexec -module -avoid-version mod_wsgi.lo -L/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib -L/usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/lib/python2.7/config -arch x86_64 -lpython2.7 -ldl -framework CoreFoundation |
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# By single criteria | |
subset_frame = dataframe.rx(dataframe.rx2('input_type').ro == 'VALUE', True) | |
# By Multiple Criteria | |
subset_frame = all_data_frame.rx((dataframe.rx2('input_type').ro == 'VALUE1').ro & | |
(dataframe.rx2('data_type').ro == 'VALUE2'), True) |
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import time | |
############################################### | |
# Returns elapsed time dynamically formatted # | |
# to accomodate days, hours, minutes, seconds # | |
############################################### | |
def elapsed_time(start,end): | |
# For use with time.time() values as start and end | |
units = [" days "," hours "," minutes ", " seconds"] | |
delta = end - start |
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# load required libraries | |
library(shiny) | |
library(plyr) | |
library(ggplot2) | |
library(googleVis) | |
library(reshape2) | |
####creation of example data on local directory for uploading#### |