Create job scripts iteratively for each FASTA file for InterProScan

interproscan_job.sh

#!/bin/bash
shopt -s nullglob
for fasta in $(find `pwd` -type f -name "*.fa" | sort)
do
  # Create your jobscript here.
  # And the command you should run in your jobscript:
  # /path/to/interproscan.sh -i $fasta -dp -iprlookup --goterms --pathways
done