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Rfam 12.1 to INSDC feature table mapping based on ftp://ftp.ebi.ac.uk/pub/databases/Rfam/11.0/misc/Rfam2INSDC.types
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{ | |
"RF00001": { | |
"AC": "RF00001", | |
"ID": "5S_rRNA", | |
"DE": "5S ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "5S ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00001" | |
} | |
] | |
}, | |
"RF00002": { | |
"AC": "RF00002", | |
"ID": "5_8S_rRNA", | |
"DE": "5.8S ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "5.8S ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00002" | |
} | |
] | |
}, | |
"RF00003": { | |
"AC": "RF00003", | |
"ID": "U1", | |
"DE": "U1 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U1 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00003" | |
} | |
] | |
}, | |
"RF00004": { | |
"AC": "RF00004", | |
"ID": "U2", | |
"DE": "U2 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U2 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00004" | |
} | |
] | |
}, | |
"RF00005": { | |
"AC": "RF00005", | |
"ID": "tRNA", | |
"DE": "tRNA", | |
"feature": "tRNA", | |
"qualifiers": [ | |
{ | |
"product": "tRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00005" | |
} | |
] | |
}, | |
"RF00006": { | |
"AC": "RF00006", | |
"ID": "Vault", | |
"DE": "Vault RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "vault_RNA" | |
}, | |
{ | |
"product": "Vault RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00006" | |
} | |
] | |
}, | |
"RF00007": { | |
"AC": "RF00007", | |
"ID": "U12", | |
"DE": "U12 minor spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U12 minor spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00007" | |
} | |
] | |
}, | |
"RF00008": { | |
"AC": "RF00008", | |
"ID": "Hammerhead_3", | |
"DE": "Hammerhead ribozyme (type III)", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "hammerhead_ribozyme" | |
}, | |
{ | |
"product": "Hammerhead ribozyme (type III)" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00008" | |
} | |
] | |
}, | |
"RF00009": { | |
"AC": "RF00009", | |
"ID": "RNaseP_nuc", | |
"DE": "Nuclear RNase P", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "RNase_P_RNA" | |
}, | |
{ | |
"product": "Nuclear RNase P" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00009" | |
} | |
] | |
}, | |
"RF00010": { | |
"AC": "RF00010", | |
"ID": "RNaseP_bact_a", | |
"DE": "Bacterial RNase P class A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "RNase_P_RNA" | |
}, | |
{ | |
"product": "Bacterial RNase P class A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00010" | |
} | |
] | |
}, | |
"RF00011": { | |
"AC": "RF00011", | |
"ID": "RNaseP_bact_b", | |
"DE": "Bacterial RNase P class B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "RNase_P_RNA" | |
}, | |
{ | |
"product": "Bacterial RNase P class B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00011" | |
} | |
] | |
}, | |
"RF00012": { | |
"AC": "RF00012", | |
"ID": "U3", | |
"DE": "Small nucleolar RNA U3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00012" | |
} | |
] | |
}, | |
"RF00013": { | |
"AC": "RF00013", | |
"ID": "6S", | |
"DE": "6S / SsrS RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "6S / SsrS RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00013" | |
} | |
] | |
}, | |
"RF00014": { | |
"AC": "RF00014", | |
"ID": "DsrA", | |
"DE": "DsrA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "DsrA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00014" | |
} | |
] | |
}, | |
"RF00015": { | |
"AC": "RF00015", | |
"ID": "U4", | |
"DE": "U4 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U4 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00015" | |
} | |
] | |
}, | |
"RF00016": { | |
"AC": "RF00016", | |
"ID": "SNORD14", | |
"DE": "Small nucleolar RNA SNORD14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00016" | |
} | |
] | |
}, | |
"RF00017": { | |
"AC": "RF00017", | |
"ID": "Metazoa_SRP", | |
"DE": "Metazoan signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Metazoan signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00017" | |
} | |
] | |
}, | |
"RF00018": { | |
"AC": "RF00018", | |
"ID": "CsrB", | |
"DE": "CsrB/RsmB RNA family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CsrB/RsmB RNA family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00018" | |
} | |
] | |
}, | |
"RF00019": { | |
"AC": "RF00019", | |
"ID": "Y_RNA", | |
"DE": "Y RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "Y_RNA" | |
}, | |
{ | |
"product": "Y RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00019" | |
} | |
] | |
}, | |
"RF00020": { | |
"AC": "RF00020", | |
"ID": "U5", | |
"DE": "U5 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U5 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00020" | |
} | |
] | |
}, | |
"RF00021": { | |
"AC": "RF00021", | |
"ID": "Spot_42", | |
"DE": "Spot 42 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Spot 42 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00021" | |
} | |
] | |
}, | |
"RF00022": { | |
"AC": "RF00022", | |
"ID": "GcvB", | |
"DE": "GcvB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "GcvB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00022" | |
} | |
] | |
}, | |
"RF00023": { | |
"AC": "RF00023", | |
"ID": "tmRNA", | |
"DE": "transfer-messenger RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "transfer-messenger RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00023" | |
} | |
] | |
}, | |
"RF00024": { | |
"AC": "RF00024", | |
"ID": "Telomerase-vert", | |
"DE": "Vertebrate telomerase RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "telomerase_RNA" | |
}, | |
{ | |
"product": "Vertebrate telomerase RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00024" | |
} | |
] | |
}, | |
"RF00025": { | |
"AC": "RF00025", | |
"ID": "Telomerase-cil", | |
"DE": "Ciliate telomerase RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "telomerase_RNA" | |
}, | |
{ | |
"product": "Ciliate telomerase RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00025" | |
} | |
] | |
}, | |
"RF00026": { | |
"AC": "RF00026", | |
"ID": "U6", | |
"DE": "U6 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U6 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00026" | |
} | |
] | |
}, | |
"RF00027": { | |
"AC": "RF00027", | |
"ID": "let-7", | |
"DE": "let-7 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "let-7 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00027" | |
} | |
] | |
}, | |
"RF00028": { | |
"AC": "RF00028", | |
"ID": "Intron_gpI", | |
"DE": "Group I catalytic intron", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00028" | |
} | |
] | |
}, | |
"RF00029": { | |
"AC": "RF00029", | |
"ID": "Intron_gpII", | |
"DE": "Group II catalytic intron", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00029" | |
} | |
] | |
}, | |
"RF00030": { | |
"AC": "RF00030", | |
"ID": "RNase_MRP", | |
"DE": "RNase MRP", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "RNase_MRP_RNA" | |
}, | |
{ | |
"product": "RNase MRP" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00030" | |
} | |
] | |
}, | |
"RF00031": { | |
"AC": "RF00031", | |
"ID": "SECIS_1", | |
"DE": "Selenocysteine insertion sequence 1", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00031" | |
} | |
] | |
}, | |
"RF00032": { | |
"AC": "RF00032", | |
"ID": "Histone3", | |
"DE": "Histone 3' UTR stem-loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00032" | |
} | |
] | |
}, | |
"RF00033": { | |
"AC": "RF00033", | |
"ID": "MicF", | |
"DE": "MicF RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "MicF RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00033" | |
} | |
] | |
}, | |
"RF00034": { | |
"AC": "RF00034", | |
"ID": "RprA", | |
"DE": "RprA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RprA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00034" | |
} | |
] | |
}, | |
"RF00035": { | |
"AC": "RF00035", | |
"ID": "OxyS", | |
"DE": "OxyS RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "OxyS RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00035" | |
} | |
] | |
}, | |
"RF00036": { | |
"AC": "RF00036", | |
"ID": "RRE", | |
"DE": "HIV Rev response element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00036" | |
} | |
] | |
}, | |
"RF00037": { | |
"AC": "RF00037", | |
"ID": "IRE_I", | |
"DE": "Iron response element I", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00037" | |
} | |
] | |
}, | |
"RF00038": { | |
"AC": "RF00038", | |
"ID": "PrfA", | |
"DE": "PrfA thermoregulator UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00038" | |
} | |
] | |
}, | |
"RF00039": { | |
"AC": "RF00039", | |
"ID": "DicF", | |
"DE": "DicF RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "DicF RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00039" | |
} | |
] | |
}, | |
"RF00040": { | |
"AC": "RF00040", | |
"ID": "rne5", | |
"DE": "RNase E 5' UTR element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00040" | |
} | |
] | |
}, | |
"RF00041": { | |
"AC": "RF00041", | |
"ID": "Entero_OriR", | |
"DE": "Enteroviral 3' UTR element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00041" | |
} | |
] | |
}, | |
"RF00042": { | |
"AC": "RF00042", | |
"ID": "CopA", | |
"DE": "CopA-like RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "CopA-like RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00042" | |
} | |
] | |
}, | |
"RF00043": { | |
"AC": "RF00043", | |
"ID": "Plasmid_R1162", | |
"DE": "R1162-like plasmid antisense RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "R1162-like plasmid antisense RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00043" | |
} | |
] | |
}, | |
"RF00044": { | |
"AC": "RF00044", | |
"ID": "Phage_pRNA", | |
"DE": "Bacteriophage pRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bacteriophage pRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00044" | |
} | |
] | |
}, | |
"RF00045": { | |
"AC": "RF00045", | |
"ID": "SNORA73", | |
"DE": "Small nucleolar RNA SNORA73 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA73 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00045" | |
} | |
] | |
}, | |
"RF00046": { | |
"AC": "RF00046", | |
"ID": "snoR30", | |
"DE": "Small nucleolar RNA R30/Z108", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R30/Z108" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00046" | |
} | |
] | |
}, | |
"RF00047": { | |
"AC": "RF00047", | |
"ID": "mir-2", | |
"DE": "mir-2 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-2 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00047" | |
} | |
] | |
}, | |
"RF00048": { | |
"AC": "RF00048", | |
"ID": "Entero_CRE", | |
"DE": "Enterovirus cis-acting replication element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00048" | |
} | |
] | |
}, | |
"RF00049": { | |
"AC": "RF00049", | |
"ID": "SNORD36", | |
"DE": "Small nucleolar RNA SNORD36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00049" | |
} | |
] | |
}, | |
"RF00050": { | |
"AC": "RF00050", | |
"ID": "FMN", | |
"DE": "FMN riboswitch (RFN element)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00050" | |
} | |
] | |
}, | |
"RF00051": { | |
"AC": "RF00051", | |
"ID": "mir-17", | |
"DE": "mir-17 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-17 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00051" | |
} | |
] | |
}, | |
"RF00052": { | |
"AC": "RF00052", | |
"ID": "lin-4", | |
"DE": "lin-4 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "lin-4 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00052" | |
} | |
] | |
}, | |
"RF00053": { | |
"AC": "RF00053", | |
"ID": "mir-7", | |
"DE": "mir-7 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-7 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00053" | |
} | |
] | |
}, | |
"RF00054": { | |
"AC": "RF00054", | |
"ID": "SNORD25", | |
"DE": "Small nucleolar RNA SNORD25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00054" | |
} | |
] | |
}, | |
"RF00055": { | |
"AC": "RF00055", | |
"ID": "SNORD96", | |
"DE": "Small nucleolar RNA SNORD96 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD96 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00055" | |
} | |
] | |
}, | |
"RF00056": { | |
"AC": "RF00056", | |
"ID": "SNORA71", | |
"DE": "Small nucleolar RNA SNORA71", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA71" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00056" | |
} | |
] | |
}, | |
"RF00057": { | |
"AC": "RF00057", | |
"ID": "RyhB", | |
"DE": "RyhB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RyhB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00057" | |
} | |
] | |
}, | |
"RF00058": { | |
"AC": "RF00058", | |
"ID": "HgcF", | |
"DE": "HgcF RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "HgcF RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00058" | |
} | |
] | |
}, | |
"RF00059": { | |
"AC": "RF00059", | |
"ID": "TPP", | |
"DE": "TPP riboswitch (THI element)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00059" | |
} | |
] | |
}, | |
"RF00060": { | |
"AC": "RF00060", | |
"ID": "HgcE", | |
"DE": "HgcE RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "HgcE RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00060" | |
} | |
] | |
}, | |
"RF00061": { | |
"AC": "RF00061", | |
"ID": "IRES_HCV", | |
"DE": "Hepatitis C virus internal ribosome entry site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00061" | |
} | |
] | |
}, | |
"RF00062": { | |
"AC": "RF00062", | |
"ID": "HgcC", | |
"DE": "HgcC family RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "HgcC family RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00062" | |
} | |
] | |
}, | |
"RF00063": { | |
"AC": "RF00063", | |
"ID": "SscA", | |
"DE": "SscA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SscA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00063" | |
} | |
] | |
}, | |
"RF00064": { | |
"AC": "RF00064", | |
"ID": "HgcG", | |
"DE": "HgcG RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "HgcG RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00064" | |
} | |
] | |
}, | |
"RF00065": { | |
"AC": "RF00065", | |
"ID": "snoR9", | |
"DE": "Small nucleolar RNA snoR9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00065" | |
} | |
] | |
}, | |
"RF00066": { | |
"AC": "RF00066", | |
"ID": "U7", | |
"DE": "U7 small nuclear RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U7 small nuclear RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00066" | |
} | |
] | |
}, | |
"RF00067": { | |
"AC": "RF00067", | |
"ID": "SNORD15", | |
"DE": "Small nucleolar RNA SNORD15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00067" | |
} | |
] | |
}, | |
"RF00068": { | |
"AC": "RF00068", | |
"ID": "SNORD21", | |
"DE": "Small nucleolar RNA SNORD21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00068" | |
} | |
] | |
}, | |
"RF00069": { | |
"AC": "RF00069", | |
"ID": "SNORD24", | |
"DE": "Small nucleolar RNA SNORD24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00069" | |
} | |
] | |
}, | |
"RF00070": { | |
"AC": "RF00070", | |
"ID": "SNORD29", | |
"DE": "Small nucleolar RNA SNORD29", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD29" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00070" | |
} | |
] | |
}, | |
"RF00071": { | |
"AC": "RF00071", | |
"ID": "SNORD73", | |
"DE": "Small nucleolar RNA SNORD73", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD73" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00071" | |
} | |
] | |
}, | |
"RF00072": { | |
"AC": "RF00072", | |
"ID": "SNORA75", | |
"DE": "Small nucleolar RNA SNORA75", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA75" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00072" | |
} | |
] | |
}, | |
"RF00073": { | |
"AC": "RF00073", | |
"ID": "mir-156", | |
"DE": "mir-156 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-156 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00073" | |
} | |
] | |
}, | |
"RF00074": { | |
"AC": "RF00074", | |
"ID": "mir-29", | |
"DE": "mir-29 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-29 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00074" | |
} | |
] | |
}, | |
"RF00075": { | |
"AC": "RF00075", | |
"ID": "mir-166", | |
"DE": "mir-166 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-166 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00075" | |
} | |
] | |
}, | |
"RF00076": { | |
"AC": "RF00076", | |
"ID": "mir-181", | |
"DE": "mir-181 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-181 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00076" | |
} | |
] | |
}, | |
"RF00077": { | |
"AC": "RF00077", | |
"ID": "SraB", | |
"DE": "SraB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SraB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00077" | |
} | |
] | |
}, | |
"RF00078": { | |
"AC": "RF00078", | |
"ID": "MicA", | |
"DE": "MicA sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "MicA sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00078" | |
} | |
] | |
}, | |
"RF00079": { | |
"AC": "RF00079", | |
"ID": "OmrA-B", | |
"DE": "OmrA-B family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "OmrA-B family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00079" | |
} | |
] | |
}, | |
"RF00080": { | |
"AC": "RF00080", | |
"ID": "yybP-ykoY", | |
"DE": "yybP-ykoY leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00080" | |
} | |
] | |
}, | |
"RF00081": { | |
"AC": "RF00081", | |
"ID": "ArcZ", | |
"DE": "ArcZ RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ArcZ RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00081" | |
} | |
] | |
}, | |
"RF00082": { | |
"AC": "RF00082", | |
"ID": "SraG", | |
"DE": "SraG RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SraG RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00082" | |
} | |
] | |
}, | |
"RF00083": { | |
"AC": "RF00083", | |
"ID": "GlmZ_SraJ", | |
"DE": "GlmZ RNA activator of glmS mRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "GlmZ RNA activator of glmS mRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00083" | |
} | |
] | |
}, | |
"RF00084": { | |
"AC": "RF00084", | |
"ID": "CsrC", | |
"DE": "CsrC RNA family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CsrC RNA family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00084" | |
} | |
] | |
}, | |
"RF00085": { | |
"AC": "RF00085", | |
"ID": "SNORD28", | |
"DE": "Small nucleolar RNA SNORD28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00085" | |
} | |
] | |
}, | |
"RF00086": { | |
"AC": "RF00086", | |
"ID": "SNORD27", | |
"DE": "Small nucleolar RNA SNORD27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00086" | |
} | |
] | |
}, | |
"RF00087": { | |
"AC": "RF00087", | |
"ID": "SNORD26", | |
"DE": "Small nucleolar RNA SNORD26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00087" | |
} | |
] | |
}, | |
"RF00088": { | |
"AC": "RF00088", | |
"ID": "SNORD30", | |
"DE": "Small nucleolar RNA SNORD30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00088" | |
} | |
] | |
}, | |
"RF00089": { | |
"AC": "RF00089", | |
"ID": "SNORD31", | |
"DE": "Small nucleolar RNA SNORD31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00089" | |
} | |
] | |
}, | |
"RF00090": { | |
"AC": "RF00090", | |
"ID": "SNORA74", | |
"DE": "Small nucleolar RNA SNORA74", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA74" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00090" | |
} | |
] | |
}, | |
"RF00091": { | |
"AC": "RF00091", | |
"ID": "SNORA62", | |
"DE": "Small nucleolar RNA SNORA62/SNORA6 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA62/SNORA6 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00091" | |
} | |
] | |
}, | |
"RF00092": { | |
"AC": "RF00092", | |
"ID": "SNORA63", | |
"DE": "Small nucleolar RNA SNORA63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00092" | |
} | |
] | |
}, | |
"RF00093": { | |
"AC": "RF00093", | |
"ID": "SNORD18", | |
"DE": "Small nucleolar RNA SNORD18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00093" | |
} | |
] | |
}, | |
"RF00094": { | |
"AC": "RF00094", | |
"ID": "HDV_ribozyme", | |
"DE": "Hepatitis delta virus ribozyme", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Hepatitis delta virus ribozyme" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00094" | |
} | |
] | |
}, | |
"RF00095": { | |
"AC": "RF00095", | |
"ID": "snoPyro_CD", | |
"DE": "Pyrococcus C/D box small nucleolar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Pyrococcus C/D box small nucleolar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00095" | |
} | |
] | |
}, | |
"RF00096": { | |
"AC": "RF00096", | |
"ID": "U8", | |
"DE": "U8 small nucleolar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "U8 small nucleolar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00096" | |
} | |
] | |
}, | |
"RF00097": { | |
"AC": "RF00097", | |
"ID": "snoR71", | |
"DE": "Plant small nucleolar RNA R71", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Plant small nucleolar RNA R71" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00097" | |
} | |
] | |
}, | |
"RF00099": { | |
"AC": "RF00099", | |
"ID": "SNORD22", | |
"DE": "Small nucleolar RNA SNORD22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00099" | |
} | |
] | |
}, | |
"RF00100": { | |
"AC": "RF00100", | |
"ID": "7SK", | |
"DE": "7SK RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "7SK RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00100" | |
} | |
] | |
}, | |
"RF00101": { | |
"AC": "RF00101", | |
"ID": "SraC_RyeA", | |
"DE": "SraC/RyeA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SraC/RyeA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00101" | |
} | |
] | |
}, | |
"RF00102": { | |
"AC": "RF00102", | |
"ID": "VA", | |
"DE": "VA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "VA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00102" | |
} | |
] | |
}, | |
"RF00103": { | |
"AC": "RF00103", | |
"ID": "mir-1", | |
"DE": "mir-1 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-1 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00103" | |
} | |
] | |
}, | |
"RF00104": { | |
"AC": "RF00104", | |
"ID": "mir-10", | |
"DE": "mir-10 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-10 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00104" | |
} | |
] | |
}, | |
"RF00105": { | |
"AC": "RF00105", | |
"ID": "SNORD115", | |
"DE": "Small nucleolar RNA SNORD115", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD115" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00105" | |
} | |
] | |
}, | |
"RF00106": { | |
"AC": "RF00106", | |
"ID": "RNAI", | |
"DE": "RNAI", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "RNAI" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00106" | |
} | |
] | |
}, | |
"RF00107": { | |
"AC": "RF00107", | |
"ID": "FinP", | |
"DE": "FinP", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "FinP" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00107" | |
} | |
] | |
}, | |
"RF00108": { | |
"AC": "RF00108", | |
"ID": "SNORD116", | |
"DE": "Small nucleolar RNA SNORD116", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD116" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00108" | |
} | |
] | |
}, | |
"RF00109": { | |
"AC": "RF00109", | |
"ID": "Vimentin3", | |
"DE": "Vimentin 3' UTR protein-binding region", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00109" | |
} | |
] | |
}, | |
"RF00110": { | |
"AC": "RF00110", | |
"ID": "RybB", | |
"DE": "RybB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RybB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00110" | |
} | |
] | |
}, | |
"RF00111": { | |
"AC": "RF00111", | |
"ID": "RyeB", | |
"DE": "RyeB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RyeB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00111" | |
} | |
] | |
}, | |
"RF00112": { | |
"AC": "RF00112", | |
"ID": "CyaR_RyeE", | |
"DE": "CyaR/Rye RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CyaR/Rye RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00112" | |
} | |
] | |
}, | |
"RF00113": { | |
"AC": "RF00113", | |
"ID": "SIB_RNA", | |
"DE": "Short Intergenic Abundant RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Short Intergenic Abundant RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00113" | |
} | |
] | |
}, | |
"RF00114": { | |
"AC": "RF00114", | |
"ID": "S15", | |
"DE": "Ribosomal S15 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00114" | |
} | |
] | |
}, | |
"RF00115": { | |
"AC": "RF00115", | |
"ID": "IS061", | |
"DE": "IS061 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IS061 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00115" | |
} | |
] | |
}, | |
"RF00116": { | |
"AC": "RF00116", | |
"ID": "C0465", | |
"DE": "C0465 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "C0465 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00116" | |
} | |
] | |
}, | |
"RF00117": { | |
"AC": "RF00117", | |
"ID": "C0719", | |
"DE": "C0719 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "C0719 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00117" | |
} | |
] | |
}, | |
"RF00118": { | |
"AC": "RF00118", | |
"ID": "rydB", | |
"DE": "rydB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rydB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00118" | |
} | |
] | |
}, | |
"RF00119": { | |
"AC": "RF00119", | |
"ID": "C0299", | |
"DE": "C0299 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "C0299 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00119" | |
} | |
] | |
}, | |
"RF00121": { | |
"AC": "RF00121", | |
"ID": "MicC", | |
"DE": "MicC RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "MicC RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00121" | |
} | |
] | |
}, | |
"RF00122": { | |
"AC": "RF00122", | |
"ID": "GadY", | |
"DE": "GadY", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "GadY" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00122" | |
} | |
] | |
}, | |
"RF00124": { | |
"AC": "RF00124", | |
"ID": "IS102", | |
"DE": "IS102 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IS102 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00124" | |
} | |
] | |
}, | |
"RF00125": { | |
"AC": "RF00125", | |
"ID": "IS128", | |
"DE": "IS128 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IS128 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00125" | |
} | |
] | |
}, | |
"RF00126": { | |
"AC": "RF00126", | |
"ID": "ryfA", | |
"DE": "ryfA RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ryfA RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00126" | |
} | |
] | |
}, | |
"RF00127": { | |
"AC": "RF00127", | |
"ID": "t44", | |
"DE": "t44 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "t44 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00127" | |
} | |
] | |
}, | |
"RF00128": { | |
"AC": "RF00128", | |
"ID": "GlmY_tke1", | |
"DE": "Glm Y RNA activator of glmS mRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Glm Y RNA activator of glmS mRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00128" | |
} | |
] | |
}, | |
"RF00129": { | |
"AC": "RF00129", | |
"ID": "mir-103", | |
"DE": "mir-103/107 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-103/107 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00129" | |
} | |
] | |
}, | |
"RF00130": { | |
"AC": "RF00130", | |
"ID": "mir-192", | |
"DE": "mir-192/215 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-192/215 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00130" | |
} | |
] | |
}, | |
"RF00131": { | |
"AC": "RF00131", | |
"ID": "mir-30", | |
"DE": "mir-30 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-30 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00131" | |
} | |
] | |
}, | |
"RF00132": { | |
"AC": "RF00132", | |
"ID": "snoR24", | |
"DE": "Small nucleolar RNA R24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00132" | |
} | |
] | |
}, | |
"RF00133": { | |
"AC": "RF00133", | |
"ID": "SNORD33", | |
"DE": "Small nucleolar RNA Z195/SNORD33/SNORD32 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z195/SNORD33/SNORD32 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00133" | |
} | |
] | |
}, | |
"RF00134": { | |
"AC": "RF00134", | |
"ID": "snoZ196", | |
"DE": "Small nucleolar RNA Z196/R39/R59 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z196/R39/R59 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00134" | |
} | |
] | |
}, | |
"RF00135": { | |
"AC": "RF00135", | |
"ID": "snoZ223", | |
"DE": "Small nucleolar RNA Z223", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z223" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00135" | |
} | |
] | |
}, | |
"RF00136": { | |
"AC": "RF00136", | |
"ID": "SNORD81", | |
"DE": "Small nucleolar RNA SNORD81", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD81" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00136" | |
} | |
] | |
}, | |
"RF00137": { | |
"AC": "RF00137", | |
"ID": "SNORD83", | |
"DE": "Small nucleolar RNA SNORD83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00137" | |
} | |
] | |
}, | |
"RF00138": { | |
"AC": "RF00138", | |
"ID": "SNORD16", | |
"DE": "Small nucleolar RNA SNORD16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00138" | |
} | |
] | |
}, | |
"RF00139": { | |
"AC": "RF00139", | |
"ID": "SNORA72", | |
"DE": "Small nucleolar RNA SNORA72", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA72" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00139" | |
} | |
] | |
}, | |
"RF00140": { | |
"AC": "RF00140", | |
"ID": "Alpha_RBS", | |
"DE": "Alpha operon ribosome binding site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00140" | |
} | |
] | |
}, | |
"RF00142": { | |
"AC": "RF00142", | |
"ID": "snoZ118", | |
"DE": "Small nucleolar RNA Z118/Z121/Z120", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z118/Z121/Z120" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00142" | |
} | |
] | |
}, | |
"RF00143": { | |
"AC": "RF00143", | |
"ID": "mir-6", | |
"DE": "mir-6 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-6 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00143" | |
} | |
] | |
}, | |
"RF00144": { | |
"AC": "RF00144", | |
"ID": "mir-199", | |
"DE": "mir-199 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-199 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00144" | |
} | |
] | |
}, | |
"RF00145": { | |
"AC": "RF00145", | |
"ID": "snoZ105", | |
"DE": "Small nucleolar RNA Z105", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z105" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00145" | |
} | |
] | |
}, | |
"RF00147": { | |
"AC": "RF00147", | |
"ID": "SNORD34", | |
"DE": "Small nucleolar RNA SNORD34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00147" | |
} | |
] | |
}, | |
"RF00149": { | |
"AC": "RF00149", | |
"ID": "snoZ103", | |
"DE": "Small nucleolar RNA Z103", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z103" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00149" | |
} | |
] | |
}, | |
"RF00150": { | |
"AC": "RF00150", | |
"ID": "SNORD42", | |
"DE": "Small nucleolar RNA SNORD42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00150" | |
} | |
] | |
}, | |
"RF00151": { | |
"AC": "RF00151", | |
"ID": "SNORD58", | |
"DE": "Small nucleolar RNA SNORD58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00151" | |
} | |
] | |
}, | |
"RF00152": { | |
"AC": "RF00152", | |
"ID": "SNORD79", | |
"DE": "Small nucleolar RNA SNORD79", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD79" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00152" | |
} | |
] | |
}, | |
"RF00153": { | |
"AC": "RF00153", | |
"ID": "SNORD62", | |
"DE": "Small nucleolar RNA SNORD62", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD62" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00153" | |
} | |
] | |
}, | |
"RF00154": { | |
"AC": "RF00154", | |
"ID": "SNORD63", | |
"DE": "Small nucleolar RNA SNORD63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00154" | |
} | |
] | |
}, | |
"RF00155": { | |
"AC": "RF00155", | |
"ID": "SNORA66", | |
"DE": "Small nucleolar RNA SNORA66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00155" | |
} | |
] | |
}, | |
"RF00156": { | |
"AC": "RF00156", | |
"ID": "SNORA70", | |
"DE": "Small nucleolar RNA SNORA70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00156" | |
} | |
] | |
}, | |
"RF00157": { | |
"AC": "RF00157", | |
"ID": "SNORD39", | |
"DE": "Small nucleolar RNA SNORD55/SNORD39", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD55/SNORD39" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00157" | |
} | |
] | |
}, | |
"RF00158": { | |
"AC": "RF00158", | |
"ID": "SNORD82", | |
"DE": "Small nucleolar RNA SNORD82", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD82" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00158" | |
} | |
] | |
}, | |
"RF00159": { | |
"AC": "RF00159", | |
"ID": "snoZ168", | |
"DE": "Small nucleolar RNA Z168/Z174", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z168/Z174" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00159" | |
} | |
] | |
}, | |
"RF00160": { | |
"AC": "RF00160", | |
"ID": "snoZ159", | |
"DE": "Small nucleolar RNA Z159/U59", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z159/U59" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00160" | |
} | |
] | |
}, | |
"RF00161": { | |
"AC": "RF00161", | |
"ID": "nos_TCE", | |
"DE": "Nanos 3' UTR translation control element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00161" | |
} | |
] | |
}, | |
"RF00162": { | |
"AC": "RF00162", | |
"ID": "SAM", | |
"DE": "SAM riboswitch (S box leader)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00162" | |
} | |
] | |
}, | |
"RF00163": { | |
"AC": "RF00163", | |
"ID": "Hammerhead_1", | |
"DE": "Hammerhead ribozyme (type I)", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "hammerhead_ribozyme" | |
}, | |
{ | |
"product": "Hammerhead ribozyme (type I)" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00163" | |
} | |
] | |
}, | |
"RF00164": { | |
"AC": "RF00164", | |
"ID": "s2m", | |
"DE": "Coronavirus 3' stem-loop II-like motif (s2m)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00164" | |
} | |
] | |
}, | |
"RF00165": { | |
"AC": "RF00165", | |
"ID": "Corona_pk3", | |
"DE": "Coronavirus 3' UTR pseudoknot", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00165" | |
} | |
] | |
}, | |
"RF00166": { | |
"AC": "RF00166", | |
"ID": "PrrB_RsmZ", | |
"DE": "PrrB/RsmZ RNA family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "PrrB/RsmZ RNA family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00166" | |
} | |
] | |
}, | |
"RF00167": { | |
"AC": "RF00167", | |
"ID": "Purine", | |
"DE": "Purine riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00167" | |
} | |
] | |
}, | |
"RF00168": { | |
"AC": "RF00168", | |
"ID": "Lysine", | |
"DE": "Lysine riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00168" | |
} | |
] | |
}, | |
"RF00169": { | |
"AC": "RF00169", | |
"ID": "Bacteria_small_SRP", | |
"DE": "Bacterial small signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Bacterial small signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00169" | |
} | |
] | |
}, | |
"RF00170": { | |
"AC": "RF00170", | |
"ID": "msr", | |
"DE": "Retron msr RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Retron msr RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00170" | |
} | |
] | |
}, | |
"RF00171": { | |
"AC": "RF00171", | |
"ID": "Tombus_5", | |
"DE": "Tombusvirus 5' UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00171" | |
} | |
] | |
}, | |
"RF00172": { | |
"AC": "RF00172", | |
"ID": "CAESAR", | |
"DE": "ctgf/hcs24 CAESAR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00172" | |
} | |
] | |
}, | |
"RF00173": { | |
"AC": "RF00173", | |
"ID": "Hairpin", | |
"DE": "Hairpin ribozyme", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Hairpin ribozyme" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00173" | |
} | |
] | |
}, | |
"RF00174": { | |
"AC": "RF00174", | |
"ID": "Cobalamin", | |
"DE": "Cobalamin riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00174" | |
} | |
] | |
}, | |
"RF00175": { | |
"AC": "RF00175", | |
"ID": "HIV-1_DIS", | |
"DE": "Human immunodeficiency virus type 1 dimerisation initiation site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00175" | |
} | |
] | |
}, | |
"RF00176": { | |
"AC": "RF00176", | |
"ID": "Tombus_3_IV", | |
"DE": "Tombusvirus 3' UTR region IV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00176" | |
} | |
] | |
}, | |
"RF00177": { | |
"AC": "RF00177", | |
"ID": "SSU_rRNA_bacteria", | |
"DE": "Bacterial small subunit ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "Bacterial small subunit ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00177" | |
} | |
] | |
}, | |
"RF00178": { | |
"AC": "RF00178", | |
"ID": "mir-24", | |
"DE": "mir-24 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-24 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00178" | |
} | |
] | |
}, | |
"RF00179": { | |
"AC": "RF00179", | |
"ID": "GAIT", | |
"DE": "GAIT element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00179" | |
} | |
] | |
}, | |
"RF00180": { | |
"AC": "RF00180", | |
"ID": "REN-SRE", | |
"DE": "Renin stability regulatory element (REN-SRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00180" | |
} | |
] | |
}, | |
"RF00181": { | |
"AC": "RF00181", | |
"ID": "SNORD113", | |
"DE": "Small nucleolar RNA SNORD113/SNORD114 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD113/SNORD114 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00181" | |
} | |
] | |
}, | |
"RF00182": { | |
"AC": "RF00182", | |
"ID": "Corona_package", | |
"DE": "Coronavirus packaging signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00182" | |
} | |
] | |
}, | |
"RF00183": { | |
"AC": "RF00183", | |
"ID": "G-CSF_SLDE", | |
"DE": "G-CSF factor stem-loop destabilising element (SLDE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00183" | |
} | |
] | |
}, | |
"RF00184": { | |
"AC": "RF00184", | |
"ID": "PVX_3", | |
"DE": "Potato virus X cis-acting regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00184" | |
} | |
] | |
}, | |
"RF00185": { | |
"AC": "RF00185", | |
"ID": "Flavi_CRE", | |
"DE": "Flavivirus 3' UTR cis-acting replication element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00185" | |
} | |
] | |
}, | |
"RF00186": { | |
"AC": "RF00186", | |
"ID": "SNORD101", | |
"DE": "Small nucleolar RNA SNORD101", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD101" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00186" | |
} | |
] | |
}, | |
"RF00187": { | |
"AC": "RF00187", | |
"ID": "SNORD102", | |
"DE": "Small nucleolar RNA SNORD102", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD102" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00187" | |
} | |
] | |
}, | |
"RF00188": { | |
"AC": "RF00188", | |
"ID": "SNORD103", | |
"DE": "Small nucleolar RNA SNORD103/SNORD85", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD103/SNORD85" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00188" | |
} | |
] | |
}, | |
"RF00189": { | |
"AC": "RF00189", | |
"ID": "SNORD95", | |
"DE": "Small nucleolar RNA SNORD95", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD95" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00189" | |
} | |
] | |
}, | |
"RF00190": { | |
"AC": "RF00190", | |
"ID": "SNORA16", | |
"DE": "Small nucleolar RNA SNORA16B/SNORA16A family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA16B/SNORA16A family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00190" | |
} | |
] | |
}, | |
"RF00191": { | |
"AC": "RF00191", | |
"ID": "SNORA57", | |
"DE": "Small nucleolar RNA SNORA57", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA57" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00191" | |
} | |
] | |
}, | |
"RF00192": { | |
"AC": "RF00192", | |
"ID": "BLV_package", | |
"DE": "Bovine leukaemia virus RNA packaging signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00192" | |
} | |
] | |
}, | |
"RF00193": { | |
"AC": "RF00193", | |
"ID": "CTV_rep_sig", | |
"DE": "Citrus tristeza virus replication signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00193" | |
} | |
] | |
}, | |
"RF00194": { | |
"AC": "RF00194", | |
"ID": "Rubella_3", | |
"DE": "Rubella virus 3' cis-acting element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00194" | |
} | |
] | |
}, | |
"RF00195": { | |
"AC": "RF00195", | |
"ID": "RsmY", | |
"DE": "RsmY RNA family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RsmY RNA family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00195" | |
} | |
] | |
}, | |
"RF00196": { | |
"AC": "RF00196", | |
"ID": "AMV_RNA1_SL", | |
"DE": "Alfalfa mosaic virus RNA 1 5' UTR stem-loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00196" | |
} | |
] | |
}, | |
"RF00198": { | |
"AC": "RF00198", | |
"ID": "SL1", | |
"DE": "SL1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SL1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00198" | |
} | |
] | |
}, | |
"RF00199": { | |
"AC": "RF00199", | |
"ID": "SL2", | |
"DE": "SL2 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SL2 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00199" | |
} | |
] | |
}, | |
"RF00200": { | |
"AC": "RF00200", | |
"ID": "snoZ199", | |
"DE": "Small nucleolar RNA Z199", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z199" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00200" | |
} | |
] | |
}, | |
"RF00201": { | |
"AC": "RF00201", | |
"ID": "snoZ278", | |
"DE": "Small nucleolar RNA Z278", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z278" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00201" | |
} | |
] | |
}, | |
"RF00202": { | |
"AC": "RF00202", | |
"ID": "snoR66", | |
"DE": "Small nucleolar RNA R66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00202" | |
} | |
] | |
}, | |
"RF00203": { | |
"AC": "RF00203", | |
"ID": "snoR160", | |
"DE": "Small nucleolar RNA R160", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R160" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00203" | |
} | |
] | |
}, | |
"RF00204": { | |
"AC": "RF00204", | |
"ID": "snoR12", | |
"DE": "Small nucleolar RNA R12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00204" | |
} | |
] | |
}, | |
"RF00205": { | |
"AC": "RF00205", | |
"ID": "snoR41", | |
"DE": "Small nucleolar RNA R41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00205" | |
} | |
] | |
}, | |
"RF00206": { | |
"AC": "RF00206", | |
"ID": "U54", | |
"DE": "Small nucleolar RNA U54", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U54" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00206" | |
} | |
] | |
}, | |
"RF00207": { | |
"AC": "RF00207", | |
"ID": "K10_TLS", | |
"DE": "K10 transport/localisation element (TLS)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00207" | |
} | |
] | |
}, | |
"RF00208": { | |
"AC": "RF00208", | |
"ID": "snoR72", | |
"DE": "Small nucleolar RNA R72", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R72" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00208" | |
} | |
] | |
}, | |
"RF00209": { | |
"AC": "RF00209", | |
"ID": "IRES_Pesti", | |
"DE": "Pestivirus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00209" | |
} | |
] | |
}, | |
"RF00210": { | |
"AC": "RF00210", | |
"ID": "IRES_Picorna_2", | |
"DE": "Aphthovirus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00210" | |
} | |
] | |
}, | |
"RF00211": { | |
"AC": "RF00211", | |
"ID": "SNORD35", | |
"DE": "Small nucleolar RNA SNORD35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00211" | |
} | |
] | |
}, | |
"RF00212": { | |
"AC": "RF00212", | |
"ID": "SNORD38", | |
"DE": "Small nucleolar RNA SNORD38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00212" | |
} | |
] | |
}, | |
"RF00213": { | |
"AC": "RF00213", | |
"ID": "snoR38", | |
"DE": "Small nucleolar RNA R38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00213" | |
} | |
] | |
}, | |
"RF00214": { | |
"AC": "RF00214", | |
"ID": "Retro_dr1", | |
"DE": "Retrovirus direct repeat 1 (dr1)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00214" | |
} | |
] | |
}, | |
"RF00215": { | |
"AC": "RF00215", | |
"ID": "Tombus_3_III", | |
"DE": "Tombus virus defective interfering (DI) RNA region 3", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00215" | |
} | |
] | |
}, | |
"RF00216": { | |
"AC": "RF00216", | |
"ID": "IRES_c-myc", | |
"DE": "c-myc internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00216" | |
} | |
] | |
}, | |
"RF00217": { | |
"AC": "RF00217", | |
"ID": "SNORD20", | |
"DE": "Small nucleolar RNA SNORD20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00217" | |
} | |
] | |
}, | |
"RF00218": { | |
"AC": "RF00218", | |
"ID": "SNORD46", | |
"DE": "Small nucleolar RNA SNORD46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00218" | |
} | |
] | |
}, | |
"RF00220": { | |
"AC": "RF00220", | |
"ID": "Rhino_CRE", | |
"DE": "Human rhinovirus internal cis-acting regulatory element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00220" | |
} | |
] | |
}, | |
"RF00221": { | |
"AC": "RF00221", | |
"ID": "SNORD43", | |
"DE": "Small nucleolar RNA SNORD43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00221" | |
} | |
] | |
}, | |
"RF00222": { | |
"AC": "RF00222", | |
"ID": "IRES_Bag1", | |
"DE": "Bag-1 internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00222" | |
} | |
] | |
}, | |
"RF00223": { | |
"AC": "RF00223", | |
"ID": "IRES_Bip", | |
"DE": "bip internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00223" | |
} | |
] | |
}, | |
"RF00224": { | |
"AC": "RF00224", | |
"ID": "IRES_FGF2", | |
"DE": "FGF-2 internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00224" | |
} | |
] | |
}, | |
"RF00225": { | |
"AC": "RF00225", | |
"ID": "IRES_Tobamo", | |
"DE": "Tobamovirus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00225" | |
} | |
] | |
}, | |
"RF00226": { | |
"AC": "RF00226", | |
"ID": "IRES_n-myc", | |
"DE": "n-myc internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00226" | |
} | |
] | |
}, | |
"RF00227": { | |
"AC": "RF00227", | |
"ID": "FIE3", | |
"DE": "FIE3 (ftz instability element 3') element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00227" | |
} | |
] | |
}, | |
"RF00228": { | |
"AC": "RF00228", | |
"ID": "IRES_HepA", | |
"DE": "Hepatitis A virus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00228" | |
} | |
] | |
}, | |
"RF00229": { | |
"AC": "RF00229", | |
"ID": "IRES_Picorna", | |
"DE": "Picornavirus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00229" | |
} | |
] | |
}, | |
"RF00230": { | |
"AC": "RF00230", | |
"ID": "T-box", | |
"DE": "T-box leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00230" | |
} | |
] | |
}, | |
"RF00231": { | |
"AC": "RF00231", | |
"ID": "SCARNA13", | |
"DE": "Small Cajal body specific RNA 13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00231" | |
} | |
] | |
}, | |
"RF00232": { | |
"AC": "RF00232", | |
"ID": "Spi-1", | |
"DE": "Spi-1 (PU.1) 5' UTR regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00232" | |
} | |
] | |
}, | |
"RF00233": { | |
"AC": "RF00233", | |
"ID": "Tymo_tRNA-like", | |
"DE": "Tymovirus/Pomovirus/Furovirus tRNA-like 3' UTR element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00233" | |
} | |
] | |
}, | |
"RF00234": { | |
"AC": "RF00234", | |
"ID": "glmS", | |
"DE": "glmS glucosamine-6-phosphate activated ribozyme", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00234" | |
} | |
] | |
}, | |
"RF00235": { | |
"AC": "RF00235", | |
"ID": "Plasmid_RNAIII", | |
"DE": "Plasmid RNAIII", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmid RNAIII" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00235" | |
} | |
] | |
}, | |
"RF00236": { | |
"AC": "RF00236", | |
"ID": "ctRNA_pGA1", | |
"DE": "ctRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "ctRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00236" | |
} | |
] | |
}, | |
"RF00237": { | |
"AC": "RF00237", | |
"ID": "mir-9", | |
"DE": "mir-9/mir-79 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-9/mir-79 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00237" | |
} | |
] | |
}, | |
"RF00238": { | |
"AC": "RF00238", | |
"ID": "ctRNA_pND324", | |
"DE": "ctRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "ctRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00238" | |
} | |
] | |
}, | |
"RF00239": { | |
"AC": "RF00239", | |
"ID": "mir-124", | |
"DE": "mir-124 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-124 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00239" | |
} | |
] | |
}, | |
"RF00240": { | |
"AC": "RF00240", | |
"ID": "RNA-OUT", | |
"DE": "RNA-OUT", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "RNA-OUT" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00240" | |
} | |
] | |
}, | |
"RF00241": { | |
"AC": "RF00241", | |
"ID": "mir-8", | |
"DE": "mir-8/mir-141/mir-200 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-8/mir-141/mir-200 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00241" | |
} | |
] | |
}, | |
"RF00242": { | |
"AC": "RF00242", | |
"ID": "ctRNA_pT181", | |
"DE": "ctRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "ctRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00242" | |
} | |
] | |
}, | |
"RF00243": { | |
"AC": "RF00243", | |
"ID": "traJ_5", | |
"DE": "traJ 5' UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00243" | |
} | |
] | |
}, | |
"RF00244": { | |
"AC": "RF00244", | |
"ID": "mir-26", | |
"DE": "mir-26 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-26 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00244" | |
} | |
] | |
}, | |
"RF00245": { | |
"AC": "RF00245", | |
"ID": "mir-19", | |
"DE": "mir-19 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-19 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00245" | |
} | |
] | |
}, | |
"RF00246": { | |
"AC": "RF00246", | |
"ID": "mir-135", | |
"DE": "mir-135 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-135 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00246" | |
} | |
] | |
}, | |
"RF00247": { | |
"AC": "RF00247", | |
"ID": "mir-160", | |
"DE": "mir-160 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-160 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00247" | |
} | |
] | |
}, | |
"RF00248": { | |
"AC": "RF00248", | |
"ID": "mir-148", | |
"DE": "mir-148/mir-152 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-148/mir-152 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00248" | |
} | |
] | |
}, | |
"RF00249": { | |
"AC": "RF00249", | |
"ID": "mir-46", | |
"DE": "mir-46/mir-47/mir-281 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-46/mir-47/mir-281 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00249" | |
} | |
] | |
}, | |
"RF00250": { | |
"AC": "RF00250", | |
"ID": "mir-TAR", | |
"DE": "Trans-activation response element (TAR)", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Trans-activation response element (TAR)" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00250" | |
} | |
] | |
}, | |
"RF00251": { | |
"AC": "RF00251", | |
"ID": "mir-219", | |
"DE": "mir-219 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-219 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00251" | |
} | |
] | |
}, | |
"RF00252": { | |
"AC": "RF00252", | |
"ID": "Alfamo_CPB", | |
"DE": "Alfalfa mosaic virus coat protein binding (CPB) RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00252" | |
} | |
] | |
}, | |
"RF00253": { | |
"AC": "RF00253", | |
"ID": "mir-101", | |
"DE": "mir-101 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-101 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00253" | |
} | |
] | |
}, | |
"RF00254": { | |
"AC": "RF00254", | |
"ID": "mir-16", | |
"DE": "mir-16 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-16 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00254" | |
} | |
] | |
}, | |
"RF00255": { | |
"AC": "RF00255", | |
"ID": "mir-218", | |
"DE": "mir-218 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-218 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00255" | |
} | |
] | |
}, | |
"RF00256": { | |
"AC": "RF00256", | |
"ID": "mir-196", | |
"DE": "mir-196 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-196 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00256" | |
} | |
] | |
}, | |
"RF00257": { | |
"AC": "RF00257", | |
"ID": "mir-194", | |
"DE": "mir-194 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-194 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00257" | |
} | |
] | |
}, | |
"RF00258": { | |
"AC": "RF00258", | |
"ID": "mir-130", | |
"DE": "mir-130 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-130 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00258" | |
} | |
] | |
}, | |
"RF00259": { | |
"AC": "RF00259", | |
"ID": "IFN_gamma", | |
"DE": "Interferon gamma 5' UTR regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00259" | |
} | |
] | |
}, | |
"RF00260": { | |
"AC": "RF00260", | |
"ID": "HepC_CRE", | |
"DE": "Hepatitis C virus (HCV) cis-acting replication element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00260" | |
} | |
] | |
}, | |
"RF00261": { | |
"AC": "RF00261", | |
"ID": "IRES_L-myc", | |
"DE": "L-myc internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00261" | |
} | |
] | |
}, | |
"RF00262": { | |
"AC": "RF00262", | |
"ID": "sar", | |
"DE": "sar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "sar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00262" | |
} | |
] | |
}, | |
"RF00263": { | |
"AC": "RF00263", | |
"ID": "SNORA68", | |
"DE": "Small nucleolar RNA SNORA68", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA68" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00263" | |
} | |
] | |
}, | |
"RF00264": { | |
"AC": "RF00264", | |
"ID": "SNORA64", | |
"DE": "Small nucleolar RNA SNORA64/SNORA10 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA64/SNORA10 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00264" | |
} | |
] | |
}, | |
"RF00265": { | |
"AC": "RF00265", | |
"ID": "SNORA69", | |
"DE": "Small nucleolar RNA SNORA69", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA69" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00265" | |
} | |
] | |
}, | |
"RF00266": { | |
"AC": "RF00266", | |
"ID": "snoZ17", | |
"DE": "Small nucleolar RNA Z17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00266" | |
} | |
] | |
}, | |
"RF00267": { | |
"AC": "RF00267", | |
"ID": "snoR64", | |
"DE": "Small nucleolar RNA R64/Z200 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R64/Z200 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00267" | |
} | |
] | |
}, | |
"RF00268": { | |
"AC": "RF00268", | |
"ID": "snoZ7", | |
"DE": "Small nucleolar RNA snoZ7/snoR77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoZ7/snoR77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00268" | |
} | |
] | |
}, | |
"RF00270": { | |
"AC": "RF00270", | |
"ID": "SNORD61", | |
"DE": "Small nucleolar RNA SNORD61", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD61" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00270" | |
} | |
] | |
}, | |
"RF00271": { | |
"AC": "RF00271", | |
"ID": "SNORD60", | |
"DE": "Small nucleolar RNA SNORD60", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD60" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00271" | |
} | |
] | |
}, | |
"RF00272": { | |
"AC": "RF00272", | |
"ID": "SNORA67", | |
"DE": "Small nucleolar RNA SNORA67", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA67" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00272" | |
} | |
] | |
}, | |
"RF00273": { | |
"AC": "RF00273", | |
"ID": "SNORD59", | |
"DE": "Small nucleolar RNA SNORD59", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD59" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00273" | |
} | |
] | |
}, | |
"RF00274": { | |
"AC": "RF00274", | |
"ID": "SNORD57", | |
"DE": "Small nucleolar RNA SNORD57", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD57" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00274" | |
} | |
] | |
}, | |
"RF00275": { | |
"AC": "RF00275", | |
"ID": "SNORD56", | |
"DE": "Small nucleolar RNA SNORD56", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD56" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00275" | |
} | |
] | |
}, | |
"RF00276": { | |
"AC": "RF00276", | |
"ID": "SNORD52", | |
"DE": "Small nucleolar RNA SNORD52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00276" | |
} | |
] | |
}, | |
"RF00277": { | |
"AC": "RF00277", | |
"ID": "SNORD49", | |
"DE": "Small nucleolar RNA SNORD49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00277" | |
} | |
] | |
}, | |
"RF00278": { | |
"AC": "RF00278", | |
"ID": "SNORD50", | |
"DE": "Small nucleolar RNA SNORD50", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD50" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00278" | |
} | |
] | |
}, | |
"RF00279": { | |
"AC": "RF00279", | |
"ID": "SNORD45", | |
"DE": "Small nucleolar RNA SNORD45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00279" | |
} | |
] | |
}, | |
"RF00280": { | |
"AC": "RF00280", | |
"ID": "SNORD51", | |
"DE": "Small nucleolar RNA SNORD51", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD51" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00280" | |
} | |
] | |
}, | |
"RF00281": { | |
"AC": "RF00281", | |
"ID": "SNORD47", | |
"DE": "Small nucleolar RNA SNORD47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00281" | |
} | |
] | |
}, | |
"RF00282": { | |
"AC": "RF00282", | |
"ID": "SNORD48", | |
"DE": "Small nucleolar RNA SNORD48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00282" | |
} | |
] | |
}, | |
"RF00283": { | |
"AC": "RF00283", | |
"ID": "SCARNA18", | |
"DE": "small Cajal body-specific RNA 18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small Cajal body-specific RNA 18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00283" | |
} | |
] | |
}, | |
"RF00284": { | |
"AC": "RF00284", | |
"ID": "SNORD74", | |
"DE": "Small nucleolar RNA SNORD74", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD74" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00284" | |
} | |
] | |
}, | |
"RF00285": { | |
"AC": "RF00285", | |
"ID": "snoZ6", | |
"DE": "Z6 small nucleolar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Z6 small nucleolar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00285" | |
} | |
] | |
}, | |
"RF00286": { | |
"AC": "RF00286", | |
"ID": "SCARNA8", | |
"DE": "Small Cajal body specific RNA 8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00286" | |
} | |
] | |
}, | |
"RF00287": { | |
"AC": "RF00287", | |
"ID": "SNORD44", | |
"DE": "Small nucleolar RNA SNORD44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00287" | |
} | |
] | |
}, | |
"RF00288": { | |
"AC": "RF00288", | |
"ID": "snoZ30", | |
"DE": "Z30 small nucleolar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Z30 small nucleolar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00288" | |
} | |
] | |
}, | |
"RF00289": { | |
"AC": "RF00289", | |
"ID": "SNORND104", | |
"DE": "Small nucleolar RNA SNORD104", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD104" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00289" | |
} | |
] | |
}, | |
"RF00290": { | |
"AC": "RF00290", | |
"ID": "BaMV_CRE", | |
"DE": "Bamboo mosaic potexvirus (BaMV) cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00290" | |
} | |
] | |
}, | |
"RF00291": { | |
"AC": "RF00291", | |
"ID": "snoR639", | |
"DE": "Small nucleolar RNA snoR639/H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR639/H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00291" | |
} | |
] | |
}, | |
"RF00292": { | |
"AC": "RF00292", | |
"ID": "snoTBR5", | |
"DE": "Small nucleolar RNA TBR5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA TBR5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00292" | |
} | |
] | |
}, | |
"RF00293": { | |
"AC": "RF00293", | |
"ID": "snoM1", | |
"DE": "Small nucleolar RNA snoM1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoM1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00293" | |
} | |
] | |
}, | |
"RF00294": { | |
"AC": "RF00294", | |
"ID": "snoTBR17", | |
"DE": "Small nucleolar RNA TBR17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA TBR17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00294" | |
} | |
] | |
}, | |
"RF00295": { | |
"AC": "RF00295", | |
"ID": "snoTBR7", | |
"DE": "Small nucleolar RNA TBR7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA TBR7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00295" | |
} | |
] | |
}, | |
"RF00296": { | |
"AC": "RF00296", | |
"ID": "snoR16", | |
"DE": "Small nucleolar RNA R16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00296" | |
} | |
] | |
}, | |
"RF00300": { | |
"AC": "RF00300", | |
"ID": "snoZ221_snoR21b", | |
"DE": "Small nucleolar RNA Z221/R21b", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z221/R21b" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00300" | |
} | |
] | |
}, | |
"RF00301": { | |
"AC": "RF00301", | |
"ID": "snoZ256", | |
"DE": "Small nucleolar RNA Z256", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z256" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00301" | |
} | |
] | |
}, | |
"RF00302": { | |
"AC": "RF00302", | |
"ID": "SNORA65", | |
"DE": "Small nucleolar RNA SNORA65", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA65" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00302" | |
} | |
] | |
}, | |
"RF00303": { | |
"AC": "RF00303", | |
"ID": "snoR86", | |
"DE": "Small nucleolar RNA snoR86", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR86" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00303" | |
} | |
] | |
}, | |
"RF00304": { | |
"AC": "RF00304", | |
"ID": "snoZ279_R105_R108", | |
"DE": "Small nucleolar RNA Z279/snoR105/snoR108", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z279/snoR105/snoR108" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00304" | |
} | |
] | |
}, | |
"RF00305": { | |
"AC": "RF00305", | |
"ID": "snoZ248", | |
"DE": "Small nucleolar RNA Z248", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z248" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00305" | |
} | |
] | |
}, | |
"RF00306": { | |
"AC": "RF00306", | |
"ID": "snoZ178", | |
"DE": "Small nucleolar RNA Z178", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z178" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00306" | |
} | |
] | |
}, | |
"RF00307": { | |
"AC": "RF00307", | |
"ID": "snoR98", | |
"DE": "Small nucleolar RNA snoR98", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR98" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00307" | |
} | |
] | |
}, | |
"RF00309": { | |
"AC": "RF00309", | |
"ID": "snosnR60_Z15", | |
"DE": "Small nucleolar RNA snR60/Z15/Z230/Z193/J17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR60/Z15/Z230/Z193/J17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00309" | |
} | |
] | |
}, | |
"RF00310": { | |
"AC": "RF00310", | |
"ID": "snoZ165", | |
"DE": "Small nucleolar RNA Z165", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z165" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00310" | |
} | |
] | |
}, | |
"RF00311": { | |
"AC": "RF00311", | |
"ID": "snoZ188", | |
"DE": "Small nucleolar RNA Z188", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z188" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00311" | |
} | |
] | |
}, | |
"RF00312": { | |
"AC": "RF00312", | |
"ID": "snoZ206", | |
"DE": "Small nucleolar RNA Z206", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z206" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00312" | |
} | |
] | |
}, | |
"RF00313": { | |
"AC": "RF00313", | |
"ID": "snoZ173", | |
"DE": "Small nucleolar RNA Z173", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z173" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00313" | |
} | |
] | |
}, | |
"RF00314": { | |
"AC": "RF00314", | |
"ID": "snoZ182", | |
"DE": "Small nucleolar RNA Z182", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z182" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00314" | |
} | |
] | |
}, | |
"RF00315": { | |
"AC": "RF00315", | |
"ID": "snoJ33", | |
"DE": "Small nucleolar RNA J33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA J33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00315" | |
} | |
] | |
}, | |
"RF00316": { | |
"AC": "RF00316", | |
"ID": "snoR43", | |
"DE": "Small nucleolar RNA R43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00316" | |
} | |
] | |
}, | |
"RF00317": { | |
"AC": "RF00317", | |
"ID": "snoZ163", | |
"DE": "Small nucleolar RNA Z163/Z177 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z163/Z177 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00317" | |
} | |
] | |
}, | |
"RF00318": { | |
"AC": "RF00318", | |
"ID": "snoZ175", | |
"DE": "Small nucleolar RNA Z175", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z175" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00318" | |
} | |
] | |
}, | |
"RF00319": { | |
"AC": "RF00319", | |
"ID": "SNORA23", | |
"DE": "Small nucleolar RNA SNORA23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00319" | |
} | |
] | |
}, | |
"RF00320": { | |
"AC": "RF00320", | |
"ID": "snoZ185", | |
"DE": "Small nucleolar RNA Z185", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z185" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00320" | |
} | |
] | |
}, | |
"RF00321": { | |
"AC": "RF00321", | |
"ID": "snoZ247", | |
"DE": "Small nucleolar RNA Z247", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z247" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00321" | |
} | |
] | |
}, | |
"RF00322": { | |
"AC": "RF00322", | |
"ID": "SNORA31", | |
"DE": "Small nucleolar RNA SNORA31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00322" | |
} | |
] | |
}, | |
"RF00323": { | |
"AC": "RF00323", | |
"ID": "snoR79", | |
"DE": "Small nucleolar RNA R79", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R79" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00323" | |
} | |
] | |
}, | |
"RF00324": { | |
"AC": "RF00324", | |
"ID": "snoMBII-202", | |
"DE": "Small nucleolar RNA MBII-202", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA MBII-202" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00324" | |
} | |
] | |
}, | |
"RF00325": { | |
"AC": "RF00325", | |
"ID": "SNORD53_SNORD92", | |
"DE": "Small nucleolar RNA SNORD53/SNORD92", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD53/SNORD92" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00325" | |
} | |
] | |
}, | |
"RF00326": { | |
"AC": "RF00326", | |
"ID": "snoZ155", | |
"DE": "Small nucleolar RNA Z155", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z155" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00326" | |
} | |
] | |
}, | |
"RF00327": { | |
"AC": "RF00327", | |
"ID": "snoZ194", | |
"DE": "Small nucleolar RNA Z194", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z194" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00327" | |
} | |
] | |
}, | |
"RF00328": { | |
"AC": "RF00328", | |
"ID": "snoZ161_228", | |
"DE": "Small nucleolar RNA Z161/Z228", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z161/Z228" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00328" | |
} | |
] | |
}, | |
"RF00329": { | |
"AC": "RF00329", | |
"ID": "snoZ162", | |
"DE": "Small nucleolar RNA Z162", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z162" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00329" | |
} | |
] | |
}, | |
"RF00330": { | |
"AC": "RF00330", | |
"ID": "snoZ43", | |
"DE": "Small nucleolar RNA Z43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00330" | |
} | |
] | |
}, | |
"RF00331": { | |
"AC": "RF00331", | |
"ID": "snoZ169", | |
"DE": "Small nucleolar RNA Z169", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z169" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00331" | |
} | |
] | |
}, | |
"RF00332": { | |
"AC": "RF00332", | |
"ID": "snoZ266", | |
"DE": "Small nucleolar RNA Z266", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z266" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00332" | |
} | |
] | |
}, | |
"RF00333": { | |
"AC": "RF00333", | |
"ID": "snoZ157", | |
"DE": "Small nucleolar RNA Z157/R69/R10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z157/R69/R10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00333" | |
} | |
] | |
}, | |
"RF00334": { | |
"AC": "RF00334", | |
"ID": "SNORA3", | |
"DE": "Small nucleolar RNA SNORA3/SNORA45 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA3/SNORA45 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00334" | |
} | |
] | |
}, | |
"RF00335": { | |
"AC": "RF00335", | |
"ID": "snoZ13_snr52", | |
"DE": "Small nucleolar RNA Z13/snr52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z13/snr52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00335" | |
} | |
] | |
}, | |
"RF00336": { | |
"AC": "RF00336", | |
"ID": "snoJ26", | |
"DE": "Small nucleolar RNA J26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA J26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00336" | |
} | |
] | |
}, | |
"RF00337": { | |
"AC": "RF00337", | |
"ID": "snoZ112", | |
"DE": "Small nucleolar RNA Z112", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z112" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00337" | |
} | |
] | |
}, | |
"RF00338": { | |
"AC": "RF00338", | |
"ID": "snoR53", | |
"DE": "Small nucleolar RNA snR53", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR53" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00338" | |
} | |
] | |
}, | |
"RF00339": { | |
"AC": "RF00339", | |
"ID": "snoR60", | |
"DE": "Small nucleolar RNA snoR60", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR60" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00339" | |
} | |
] | |
}, | |
"RF00340": { | |
"AC": "RF00340", | |
"ID": "SNORA36", | |
"DE": "Small nucleolar RNA SNORA36 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA36 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00340" | |
} | |
] | |
}, | |
"RF00341": { | |
"AC": "RF00341", | |
"ID": "snoZ39", | |
"DE": "Small nucleolar RNA Z39", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z39" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00341" | |
} | |
] | |
}, | |
"RF00342": { | |
"AC": "RF00342", | |
"ID": "snoZ40", | |
"DE": "Small nucleolar RNA Z40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00342" | |
} | |
] | |
}, | |
"RF00343": { | |
"AC": "RF00343", | |
"ID": "snoZ122", | |
"DE": "Small nucleolar RNA Z122", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z122" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00343" | |
} | |
] | |
}, | |
"RF00344": { | |
"AC": "RF00344", | |
"ID": "snoZ267", | |
"DE": "Small nucleolar RNA Z267", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z267" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00344" | |
} | |
] | |
}, | |
"RF00345": { | |
"AC": "RF00345", | |
"ID": "snoR1", | |
"DE": "Small nucleolar RNA snoR1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00345" | |
} | |
] | |
}, | |
"RF00348": { | |
"AC": "RF00348", | |
"ID": "snoR9_plant", | |
"DE": "Small nucleolar RNA snoR9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00348" | |
} | |
] | |
}, | |
"RF00349": { | |
"AC": "RF00349", | |
"ID": "snoR11", | |
"DE": "Small nucleolar RNA R11/Z151", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R11/Z151" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00349" | |
} | |
] | |
}, | |
"RF00350": { | |
"AC": "RF00350", | |
"ID": "snoZ152", | |
"DE": "Small nucleolar RNA Z152/R70/R12/", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z152/R70/R12/" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00350" | |
} | |
] | |
}, | |
"RF00351": { | |
"AC": "RF00351", | |
"ID": "snoR20", | |
"DE": "Small nucleolar RNA R20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00351" | |
} | |
] | |
}, | |
"RF00352": { | |
"AC": "RF00352", | |
"ID": "snoR21", | |
"DE": "Small nucleolar RNA R21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00352" | |
} | |
] | |
}, | |
"RF00353": { | |
"AC": "RF00353", | |
"ID": "snoR31_Z110_Z27", | |
"DE": "Small nucleolar RNA snoR31/Z110/Z27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR31/Z110/Z27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00353" | |
} | |
] | |
}, | |
"RF00355": { | |
"AC": "RF00355", | |
"ID": "snoR28", | |
"DE": "Small nucleolar RNA snoR28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00355" | |
} | |
] | |
}, | |
"RF00356": { | |
"AC": "RF00356", | |
"ID": "snoR32_R81", | |
"DE": "Small nucleolar RNA R32/R81/Z41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R32/R81/Z41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00356" | |
} | |
] | |
}, | |
"RF00357": { | |
"AC": "RF00357", | |
"ID": "snoR44_J54", | |
"DE": "Small nucleolar RNA R44/J54/Z268 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R44/J54/Z268 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00357" | |
} | |
] | |
}, | |
"RF00358": { | |
"AC": "RF00358", | |
"ID": "snoZ101", | |
"DE": "Small nucleolar RNA Z101", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z101" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00358" | |
} | |
] | |
}, | |
"RF00359": { | |
"AC": "RF00359", | |
"ID": "snoZ102_R77", | |
"DE": "Small nucleolar RNA Z102/R77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z102/R77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00359" | |
} | |
] | |
}, | |
"RF00360": { | |
"AC": "RF00360", | |
"ID": "snoZ107_R87", | |
"DE": "Small nucleolar RNA Z107/R87", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z107/R87" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00360" | |
} | |
] | |
}, | |
"RF00361": { | |
"AC": "RF00361", | |
"ID": "snoZ119", | |
"DE": "Small nucleolar RNA Z119", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z119" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00361" | |
} | |
] | |
}, | |
"RF00362": { | |
"AC": "RF00362", | |
"ID": "Pospi_RY", | |
"DE": "Pospiviroid RY motif stem loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00362" | |
} | |
] | |
}, | |
"RF00363": { | |
"AC": "RF00363", | |
"ID": "mir-BART1", | |
"DE": "mir-BART1 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-BART1 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00363" | |
} | |
] | |
}, | |
"RF00364": { | |
"AC": "RF00364", | |
"ID": "mir-BART2", | |
"DE": "mir-BART2 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-BART2 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00364" | |
} | |
] | |
}, | |
"RF00365": { | |
"AC": "RF00365", | |
"ID": "mir-BHRF1-1", | |
"DE": "mir-BHRF1-1 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-BHRF1-1 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00365" | |
} | |
] | |
}, | |
"RF00366": { | |
"AC": "RF00366", | |
"ID": "mir-BHRF1-2", | |
"DE": "mir-BHRF1-2 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-BHRF1-2 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00366" | |
} | |
] | |
}, | |
"RF00367": { | |
"AC": "RF00367", | |
"ID": "mir-BHRF1-3", | |
"DE": "mir-BHRF1-3 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-BHRF1-3 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00367" | |
} | |
] | |
}, | |
"RF00368": { | |
"AC": "RF00368", | |
"ID": "sroB", | |
"DE": "sroB RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sroB RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00368" | |
} | |
] | |
}, | |
"RF00369": { | |
"AC": "RF00369", | |
"ID": "sroC", | |
"DE": "sroC RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sroC RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00369" | |
} | |
] | |
}, | |
"RF00370": { | |
"AC": "RF00370", | |
"ID": "sroD", | |
"DE": "sroD RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sroD RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00370" | |
} | |
] | |
}, | |
"RF00371": { | |
"AC": "RF00371", | |
"ID": "sroE", | |
"DE": "sroE RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sroE RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00371" | |
} | |
] | |
}, | |
"RF00372": { | |
"AC": "RF00372", | |
"ID": "sroH", | |
"DE": "sroH RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sroH RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00372" | |
} | |
] | |
}, | |
"RF00373": { | |
"AC": "RF00373", | |
"ID": "RNaseP_arch", | |
"DE": "Archaeal RNase P", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "RNase_P_RNA" | |
}, | |
{ | |
"product": "Archaeal RNase P" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00373" | |
} | |
] | |
}, | |
"RF00374": { | |
"AC": "RF00374", | |
"ID": "Gammaretro_CES", | |
"DE": "Gammaretrovirus core encapsidation signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00374" | |
} | |
] | |
}, | |
"RF00375": { | |
"AC": "RF00375", | |
"ID": "HIV_PBS", | |
"DE": "HIV primer binding site (PBS)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00375" | |
} | |
] | |
}, | |
"RF00376": { | |
"AC": "RF00376", | |
"ID": "HIV_GSL3", | |
"DE": "HIV gag stem loop 3 (GSL3)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00376" | |
} | |
] | |
}, | |
"RF00377": { | |
"AC": "RF00377", | |
"ID": "snoU6-53", | |
"DE": "Small nucleolar RNA U6-53/MBII-28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U6-53/MBII-28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00377" | |
} | |
] | |
}, | |
"RF00378": { | |
"AC": "RF00378", | |
"ID": "Qrr", | |
"DE": "Qrr RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Qrr RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00378" | |
} | |
] | |
}, | |
"RF00379": { | |
"AC": "RF00379", | |
"ID": "ydaO-yuaA", | |
"DE": "ydaO/yuaA leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00379" | |
} | |
] | |
}, | |
"RF00380": { | |
"AC": "RF00380", | |
"ID": "ykoK", | |
"DE": "ykoK leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00380" | |
} | |
] | |
}, | |
"RF00381": { | |
"AC": "RF00381", | |
"ID": "Antizyme_FSE", | |
"DE": "Antizyme RNA frameshifting stimulation element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00381" | |
} | |
] | |
}, | |
"RF00382": { | |
"AC": "RF00382", | |
"ID": "DnaX", | |
"DE": "DnaX ribosomal frameshifting element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00382" | |
} | |
] | |
}, | |
"RF00383": { | |
"AC": "RF00383", | |
"ID": "IS1222_FSE", | |
"DE": "Insertion sequence IS1222 ribosomal frameshifting element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00383" | |
} | |
] | |
}, | |
"RF00384": { | |
"AC": "RF00384", | |
"ID": "Pox_AX_element", | |
"DE": "Poxvirus AX element late mRNA cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00384" | |
} | |
] | |
}, | |
"RF00385": { | |
"AC": "RF00385", | |
"ID": "IBV_D-RNA", | |
"DE": "Infectious bronchitis virus D-RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00385" | |
} | |
] | |
}, | |
"RF00386": { | |
"AC": "RF00386", | |
"ID": "Entero_5_CRE", | |
"DE": "Enterovirus 5' cloverleaf cis-acting replication element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00386" | |
} | |
] | |
}, | |
"RF00387": { | |
"AC": "RF00387", | |
"ID": "IRES_FGF1", | |
"DE": "FGF-1 internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00387" | |
} | |
] | |
}, | |
"RF00388": { | |
"AC": "RF00388", | |
"ID": "Anti-Q_RNA", | |
"DE": "Anti-Q RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Anti-Q RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00388" | |
} | |
] | |
}, | |
"RF00389": { | |
"AC": "RF00389", | |
"ID": "satBaMV_CRE", | |
"DE": "Bamboo mosaic virus satellite RNA cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00389" | |
} | |
] | |
}, | |
"RF00390": { | |
"AC": "RF00390", | |
"ID": "UPSK", | |
"DE": "UPSK RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00390" | |
} | |
] | |
}, | |
"RF00391": { | |
"AC": "RF00391", | |
"ID": "RtT", | |
"DE": "RtT RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00391" | |
} | |
] | |
}, | |
"RF00392": { | |
"AC": "RF00392", | |
"ID": "SNORA5", | |
"DE": "Small nucleolar RNA SNORA5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00392" | |
} | |
] | |
}, | |
"RF00393": { | |
"AC": "RF00393", | |
"ID": "SNORA8", | |
"DE": "Small nucleolar RNA SNORA8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00393" | |
} | |
] | |
}, | |
"RF00394": { | |
"AC": "RF00394", | |
"ID": "SNORA4", | |
"DE": "Small nucleolar RNA SNORA4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00394" | |
} | |
] | |
}, | |
"RF00396": { | |
"AC": "RF00396", | |
"ID": "SNORA13", | |
"DE": "Small nucleolar RNA SNORA13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00396" | |
} | |
] | |
}, | |
"RF00397": { | |
"AC": "RF00397", | |
"ID": "SNORA14", | |
"DE": "Small nucleolar RNA SNORA14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00397" | |
} | |
] | |
}, | |
"RF00398": { | |
"AC": "RF00398", | |
"ID": "SNORA15", | |
"DE": "Small nucleolar RNA SNORA15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00398" | |
} | |
] | |
}, | |
"RF00399": { | |
"AC": "RF00399", | |
"ID": "SNORA24", | |
"DE": "Small nucleolar RNA SNORA24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00399" | |
} | |
] | |
}, | |
"RF00400": { | |
"AC": "RF00400", | |
"ID": "SNORA28", | |
"DE": "Small nucleolar RNA SNORA28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00400" | |
} | |
] | |
}, | |
"RF00401": { | |
"AC": "RF00401", | |
"ID": "SNORA20", | |
"DE": "Small nucleolar RNA SNORA20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00401" | |
} | |
] | |
}, | |
"RF00402": { | |
"AC": "RF00402", | |
"ID": "SNORA25", | |
"DE": "Small nucleolar RNA SNORA25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00402" | |
} | |
] | |
}, | |
"RF00403": { | |
"AC": "RF00403", | |
"ID": "SNORA41", | |
"DE": "Small nucleolar RNA SNORA41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00403" | |
} | |
] | |
}, | |
"RF00404": { | |
"AC": "RF00404", | |
"ID": "SNORA46", | |
"DE": "Small nucleolar RNA SNORA46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00404" | |
} | |
] | |
}, | |
"RF00405": { | |
"AC": "RF00405", | |
"ID": "SNORA44", | |
"DE": "Small nucleolar RNA SNORA44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00405" | |
} | |
] | |
}, | |
"RF00406": { | |
"AC": "RF00406", | |
"ID": "SNORA42", | |
"DE": "Small nucleolar RNA SNORA42/SNORA80 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA42/SNORA80 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00406" | |
} | |
] | |
}, | |
"RF00407": { | |
"AC": "RF00407", | |
"ID": "SNORA50", | |
"DE": "Small nucleolar RNA SNORA50", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA50" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00407" | |
} | |
] | |
}, | |
"RF00408": { | |
"AC": "RF00408", | |
"ID": "SNORA1", | |
"DE": "Small nucleolar RNA SNORA1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00408" | |
} | |
] | |
}, | |
"RF00409": { | |
"AC": "RF00409", | |
"ID": "SNORA7", | |
"DE": "Small nucleolar RNA SNORA7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00409" | |
} | |
] | |
}, | |
"RF00410": { | |
"AC": "RF00410", | |
"ID": "SNORA2", | |
"DE": "Small nucleolar RNA SNORA2/SNORA34 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA2/SNORA34 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00410" | |
} | |
] | |
}, | |
"RF00411": { | |
"AC": "RF00411", | |
"ID": "SNORA9", | |
"DE": "Small nucleolar RNA SNORA9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00411" | |
} | |
] | |
}, | |
"RF00412": { | |
"AC": "RF00412", | |
"ID": "SNORA21", | |
"DE": "Small nucleolar RNA SNORA21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00412" | |
} | |
] | |
}, | |
"RF00413": { | |
"AC": "RF00413", | |
"ID": "SNORA19", | |
"DE": "Small nucleolar RNA SNORA19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00413" | |
} | |
] | |
}, | |
"RF00414": { | |
"AC": "RF00414", | |
"ID": "SNORA22", | |
"DE": "Small nucleolar RNA SNORA22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00414" | |
} | |
] | |
}, | |
"RF00415": { | |
"AC": "RF00415", | |
"ID": "SNORA30", | |
"DE": "Small nucleolar RNA SNORA30/SNORA37 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA30/SNORA37 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00415" | |
} | |
] | |
}, | |
"RF00416": { | |
"AC": "RF00416", | |
"ID": "SNORA43", | |
"DE": "Small nucleolar RNA SNORA43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00416" | |
} | |
] | |
}, | |
"RF00417": { | |
"AC": "RF00417", | |
"ID": "SNORA56", | |
"DE": "Small nucleolar RNA SNORA56", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA56" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00417" | |
} | |
] | |
}, | |
"RF00418": { | |
"AC": "RF00418", | |
"ID": "SNORA58", | |
"DE": "Small nucleolar RNA SNORA58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00418" | |
} | |
] | |
}, | |
"RF00419": { | |
"AC": "RF00419", | |
"ID": "SNORA52", | |
"DE": "Small nucleolar RNA SNORA52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00419" | |
} | |
] | |
}, | |
"RF00420": { | |
"AC": "RF00420", | |
"ID": "SNORA61", | |
"DE": "Small nucleolar RNA SNORA61", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA61" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00420" | |
} | |
] | |
}, | |
"RF00421": { | |
"AC": "RF00421", | |
"ID": "SNORA32", | |
"DE": "Small nucleolar RNA SNORA32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00421" | |
} | |
] | |
}, | |
"RF00422": { | |
"AC": "RF00422", | |
"ID": "SCARNA24", | |
"DE": "Small Cajal body specific RNA 24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00422" | |
} | |
] | |
}, | |
"RF00423": { | |
"AC": "RF00423", | |
"ID": "SCARNA4", | |
"DE": "Small Cajal body specific RNA 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00423" | |
} | |
] | |
}, | |
"RF00424": { | |
"AC": "RF00424", | |
"ID": "SCARNA16", | |
"DE": "Small Cajal body specific RNA 16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00424" | |
} | |
] | |
}, | |
"RF00425": { | |
"AC": "RF00425", | |
"ID": "SNORA18", | |
"DE": "Small nucleolar RNA SNORA18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00425" | |
} | |
] | |
}, | |
"RF00426": { | |
"AC": "RF00426", | |
"ID": "SCARNA15", | |
"DE": "Small Cajal body specific RNA 15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00426" | |
} | |
] | |
}, | |
"RF00427": { | |
"AC": "RF00427", | |
"ID": "SCARNA23", | |
"DE": "Small Cajal body specific RNA 23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00427" | |
} | |
] | |
}, | |
"RF00428": { | |
"AC": "RF00428", | |
"ID": "SNORA38", | |
"DE": "Small nucleolar RNA SNORA38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00428" | |
} | |
] | |
}, | |
"RF00429": { | |
"AC": "RF00429", | |
"ID": "SNORA29", | |
"DE": "Small nucleolar RNA SNORA29", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA29" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00429" | |
} | |
] | |
}, | |
"RF00430": { | |
"AC": "RF00430", | |
"ID": "SNORA54", | |
"DE": "Small nucleolar RNA SNORA54", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA54" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00430" | |
} | |
] | |
}, | |
"RF00431": { | |
"AC": "RF00431", | |
"ID": "SNORA55", | |
"DE": "Small nucleolar RNA SNORA55", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA55" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00431" | |
} | |
] | |
}, | |
"RF00432": { | |
"AC": "RF00432", | |
"ID": "SNORA51", | |
"DE": "Small nucleolar RNA SNORA51", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA51" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00432" | |
} | |
] | |
}, | |
"RF00433": { | |
"AC": "RF00433", | |
"ID": "Hsp90_CRE", | |
"DE": "Hsp90 cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00433" | |
} | |
] | |
}, | |
"RF00434": { | |
"AC": "RF00434", | |
"ID": "BTE", | |
"DE": "Luteovirus cap-independent translation element (BTE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00434" | |
} | |
] | |
}, | |
"RF00435": { | |
"AC": "RF00435", | |
"ID": "ROSE", | |
"DE": "Repression of heat shock gene expression (ROSE) element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00435" | |
} | |
] | |
}, | |
"RF00436": { | |
"AC": "RF00436", | |
"ID": "UnaL2", | |
"DE": "UnaL2 LINE 3' element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00436" | |
} | |
] | |
}, | |
"RF00437": { | |
"AC": "RF00437", | |
"ID": "HLE", | |
"DE": "Hairy RNA localisation element (HLE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00437" | |
} | |
] | |
}, | |
"RF00438": { | |
"AC": "RF00438", | |
"ID": "SNORA33", | |
"DE": "Small nucleolar RNA SNORA33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00438" | |
} | |
] | |
}, | |
"RF00439": { | |
"AC": "RF00439", | |
"ID": "SNORD87", | |
"DE": "Small nucleolar RNA SNORD87", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD87" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00439" | |
} | |
] | |
}, | |
"RF00440": { | |
"AC": "RF00440", | |
"ID": "SNORD37", | |
"DE": "Small nucleolar RNA SNORD37", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD37" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00440" | |
} | |
] | |
}, | |
"RF00441": { | |
"AC": "RF00441", | |
"ID": "snoZ242", | |
"DE": "Small nucleolar RNA Z242", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z242" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00441" | |
} | |
] | |
}, | |
"RF00442": { | |
"AC": "RF00442", | |
"ID": "ykkC-yxkD", | |
"DE": "ykkC-yxkD leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00442" | |
} | |
] | |
}, | |
"RF00443": { | |
"AC": "RF00443", | |
"ID": "SNORA27", | |
"DE": "Small nucleolar RNA SNORA27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00443" | |
} | |
] | |
}, | |
"RF00444": { | |
"AC": "RF00444", | |
"ID": "PrrF", | |
"DE": "PrrF RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "PrrF RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00444" | |
} | |
] | |
}, | |
"RF00445": { | |
"AC": "RF00445", | |
"ID": "mir-399", | |
"DE": "mir-399 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-399 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00445" | |
} | |
] | |
}, | |
"RF00446": { | |
"AC": "RF00446", | |
"ID": "mir-133", | |
"DE": "mir-133 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-133 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00446" | |
} | |
] | |
}, | |
"RF00447": { | |
"AC": "RF00447", | |
"ID": "IRES_Kv1_4", | |
"DE": "Voltage-gated potassium-channel Kv1.4 IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00447" | |
} | |
] | |
}, | |
"RF00448": { | |
"AC": "RF00448", | |
"ID": "IRES_EBNA", | |
"DE": "Epstein-Barr virus nuclear antigen (EBNA) IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00448" | |
} | |
] | |
}, | |
"RF00449": { | |
"AC": "RF00449", | |
"ID": "IRES_HIF1", | |
"DE": "HIF-1 alpha IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00449" | |
} | |
] | |
}, | |
"RF00451": { | |
"AC": "RF00451", | |
"ID": "mir-395", | |
"DE": "mir-395 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-395 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00451" | |
} | |
] | |
}, | |
"RF00452": { | |
"AC": "RF00452", | |
"ID": "mir-172", | |
"DE": "mir-172 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-172 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00452" | |
} | |
] | |
}, | |
"RF00453": { | |
"AC": "RF00453", | |
"ID": "Cardiovirus_CRE", | |
"DE": "Cardiovirus cis-acting replication element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00453" | |
} | |
] | |
}, | |
"RF00454": { | |
"AC": "RF00454", | |
"ID": "p27_CRE", | |
"DE": "p27 cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00454" | |
} | |
] | |
}, | |
"RF00455": { | |
"AC": "RF00455", | |
"ID": "mir-15", | |
"DE": "mir-15 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-15 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00455" | |
} | |
] | |
}, | |
"RF00456": { | |
"AC": "RF00456", | |
"ID": "mir-34", | |
"DE": "mir-34 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-34 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00456" | |
} | |
] | |
}, | |
"RF00457": { | |
"AC": "RF00457", | |
"ID": "IRES_mnt", | |
"DE": "Mnt IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00457" | |
} | |
] | |
}, | |
"RF00458": { | |
"AC": "RF00458", | |
"ID": "IRES_Cripavirus", | |
"DE": "Cripavirus internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00458" | |
} | |
] | |
}, | |
"RF00459": { | |
"AC": "RF00459", | |
"ID": "MPMV_package", | |
"DE": "Mason-Pfizer monkey virus packaging signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00459" | |
} | |
] | |
}, | |
"RF00460": { | |
"AC": "RF00460", | |
"ID": "U1A_PIE", | |
"DE": "U1A polyadenylation inhibition element (PIE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00460" | |
} | |
] | |
}, | |
"RF00461": { | |
"AC": "RF00461", | |
"ID": "IRES_VEGF_A", | |
"DE": "Vascular endothelial growth factor (VEGF) IRES A", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00461" | |
} | |
] | |
}, | |
"RF00462": { | |
"AC": "RF00462", | |
"ID": "IRES_APC", | |
"DE": "APC internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00462" | |
} | |
] | |
}, | |
"RF00463": { | |
"AC": "RF00463", | |
"ID": "ApoB_5_CRE", | |
"DE": "Apolipoprotein B (apoB) 5' UTR cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00463" | |
} | |
] | |
}, | |
"RF00464": { | |
"AC": "RF00464", | |
"ID": "mir-92", | |
"DE": "mir-92 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-92 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00464" | |
} | |
] | |
}, | |
"RF00465": { | |
"AC": "RF00465", | |
"ID": "JEV_hairpin", | |
"DE": "Japanese encephalitis virus (JEV) hairpin structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00465" | |
} | |
] | |
}, | |
"RF00467": { | |
"AC": "RF00467", | |
"ID": "RSV_PBS", | |
"DE": "Rous sarcoma virus (RSV) primer binding site (PBS)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00467" | |
} | |
] | |
}, | |
"RF00468": { | |
"AC": "RF00468", | |
"ID": "HCV_SLVII", | |
"DE": "Hepatitis C virus stem-loop VII", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00468" | |
} | |
] | |
}, | |
"RF00469": { | |
"AC": "RF00469", | |
"ID": "HCV_SLIV", | |
"DE": "Hepatitis C stem-loop IV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00469" | |
} | |
] | |
}, | |
"RF00470": { | |
"AC": "RF00470", | |
"ID": "Toga_5_CRE", | |
"DE": "Togavirus 5' plus strand cis-regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00470" | |
} | |
] | |
}, | |
"RF00471": { | |
"AC": "RF00471", | |
"ID": "snosnR48", | |
"DE": "Small nucleolar RNA snR48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00471" | |
} | |
] | |
}, | |
"RF00472": { | |
"AC": "RF00472", | |
"ID": "snosnR55", | |
"DE": "Small nucleolar RNA snR55/Z10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR55/Z10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00472" | |
} | |
] | |
}, | |
"RF00473": { | |
"AC": "RF00473", | |
"ID": "snosnR54", | |
"DE": "Small nucleolar RNA snR54", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR54" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00473" | |
} | |
] | |
}, | |
"RF00474": { | |
"AC": "RF00474", | |
"ID": "snosnR57", | |
"DE": "Small nucleolar RNA snR57", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR57" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00474" | |
} | |
] | |
}, | |
"RF00475": { | |
"AC": "RF00475", | |
"ID": "snosnR69", | |
"DE": "Small nucleolar RNA snR69", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR69" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00475" | |
} | |
] | |
}, | |
"RF00476": { | |
"AC": "RF00476", | |
"ID": "snosnR61", | |
"DE": "Small nucleolar RNA snR61/Z1/Z11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR61/Z1/Z11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00476" | |
} | |
] | |
}, | |
"RF00477": { | |
"AC": "RF00477", | |
"ID": "snosnR66", | |
"DE": "Small nucleolar RNA snR66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00477" | |
} | |
] | |
}, | |
"RF00478": { | |
"AC": "RF00478", | |
"ID": "SCARNA6", | |
"DE": "Small Cajal body specific RNA 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00478" | |
} | |
] | |
}, | |
"RF00479": { | |
"AC": "RF00479", | |
"ID": "snosnR71", | |
"DE": "Small nucleolar RNA snR71", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR71" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00479" | |
} | |
] | |
}, | |
"RF00480": { | |
"AC": "RF00480", | |
"ID": "HIV_FE", | |
"DE": "HIV Ribosomal frameshift signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00480" | |
} | |
] | |
}, | |
"RF00481": { | |
"AC": "RF00481", | |
"ID": "HCV_X3", | |
"DE": "Hepatitis C virus 3'X element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00481" | |
} | |
] | |
}, | |
"RF00482": { | |
"AC": "RF00482", | |
"ID": "snoF1_F2", | |
"DE": "Small nucleolar RNA F1/F2/snoR5a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA F1/F2/snoR5a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00482" | |
} | |
] | |
}, | |
"RF00483": { | |
"AC": "RF00483", | |
"ID": "IRES_IGF2", | |
"DE": "Insulin-like growth factor II IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00483" | |
} | |
] | |
}, | |
"RF00484": { | |
"AC": "RF00484", | |
"ID": "IRES_Cx32", | |
"DE": "Connexin-32 internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00484" | |
} | |
] | |
}, | |
"RF00485": { | |
"AC": "RF00485", | |
"ID": "K_chan_RES", | |
"DE": "Potassium channel RNA editing signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00485" | |
} | |
] | |
}, | |
"RF00486": { | |
"AC": "RF00486", | |
"ID": "mir-129", | |
"DE": "mir-129 microRNA precursor family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-129 microRNA precursor family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00486" | |
} | |
] | |
}, | |
"RF00487": { | |
"AC": "RF00487", | |
"ID": "IRES_Cx43", | |
"DE": "Connexin-43 internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00487" | |
} | |
] | |
}, | |
"RF00488": { | |
"AC": "RF00488", | |
"ID": "U1_yeast", | |
"DE": "Yeast U1 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "Yeast U1 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00488" | |
} | |
] | |
}, | |
"RF00489": { | |
"AC": "RF00489", | |
"ID": "ctRNA_p42d", | |
"DE": "ctRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "ctRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00489" | |
} | |
] | |
}, | |
"RF00490": { | |
"AC": "RF00490", | |
"ID": "S-element", | |
"DE": "S-element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00490" | |
} | |
] | |
}, | |
"RF00492": { | |
"AC": "RF00492", | |
"ID": "SCARNA17", | |
"DE": "small Cajal body-specific RNA 17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small Cajal body-specific RNA 17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00492" | |
} | |
] | |
}, | |
"RF00493": { | |
"AC": "RF00493", | |
"ID": "snoU2-30", | |
"DE": "Small nucleolar RNA U2-30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U2-30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00493" | |
} | |
] | |
}, | |
"RF00494": { | |
"AC": "RF00494", | |
"ID": "snoU2_19", | |
"DE": "Small nucleolar RNA U2-19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U2-19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00494" | |
} | |
] | |
}, | |
"RF00495": { | |
"AC": "RF00495", | |
"ID": "IRES_Hsp70", | |
"DE": "Heat shock protein 70 (Hsp70) internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00495" | |
} | |
] | |
}, | |
"RF00496": { | |
"AC": "RF00496", | |
"ID": "Corona_SL-III", | |
"DE": "Coronavirus SL-III cis-acting replication element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00496" | |
} | |
] | |
}, | |
"RF00498": { | |
"AC": "RF00498", | |
"ID": "EAV_LTH", | |
"DE": "Equine arteritis virus leader TRS hairpin (LTH)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00498" | |
} | |
] | |
}, | |
"RF00499": { | |
"AC": "RF00499", | |
"ID": "Parecho_CRE", | |
"DE": "Human parechovirus 1 (HPeV1) cis regulatory element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00499" | |
} | |
] | |
}, | |
"RF00500": { | |
"AC": "RF00500", | |
"ID": "TCV_H5", | |
"DE": "Turnip crinkle virus (TCV) repressor of minus strand synthesis H5", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00500" | |
} | |
] | |
}, | |
"RF00501": { | |
"AC": "RF00501", | |
"ID": "Rota_CRE", | |
"DE": "Rotavirus cis-acting replication element (CRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00501" | |
} | |
] | |
}, | |
"RF00502": { | |
"AC": "RF00502", | |
"ID": "TCV_Pr", | |
"DE": "Turnip crinkle virus (TCV) core promoter hairpin (Pr)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00502" | |
} | |
] | |
}, | |
"RF00503": { | |
"AC": "RF00503", | |
"ID": "RNAIII", | |
"DE": "RNAIII", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNAIII" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00503" | |
} | |
] | |
}, | |
"RF00504": { | |
"AC": "RF00504", | |
"ID": "Glycine", | |
"DE": "Glycine riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00504" | |
} | |
] | |
}, | |
"RF00505": { | |
"AC": "RF00505", | |
"ID": "RydC", | |
"DE": "RydC RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RydC RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00505" | |
} | |
] | |
}, | |
"RF00506": { | |
"AC": "RF00506", | |
"ID": "Thr_leader", | |
"DE": "Threonine operon leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00506" | |
} | |
] | |
}, | |
"RF00507": { | |
"AC": "RF00507", | |
"ID": "Corona_FSE", | |
"DE": "Coronavirus frameshifting stimulation element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00507" | |
} | |
] | |
}, | |
"RF00509": { | |
"AC": "RF00509", | |
"ID": "snosnR64", | |
"DE": "Small nucleolar RNA snR64", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR64" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00509" | |
} | |
] | |
}, | |
"RF00510": { | |
"AC": "RF00510", | |
"ID": "Tombus_IRE", | |
"DE": "Tombusvirus internal replication element (IRE)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00510" | |
} | |
] | |
}, | |
"RF00511": { | |
"AC": "RF00511", | |
"ID": "IRES_KSHV", | |
"DE": "Kaposi's sarcoma-associated herpesvirus internal ribosome entry site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00511" | |
} | |
] | |
}, | |
"RF00512": { | |
"AC": "RF00512", | |
"ID": "Leu_leader", | |
"DE": "Leucine operon leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00512" | |
} | |
] | |
}, | |
"RF00513": { | |
"AC": "RF00513", | |
"ID": "Trp_leader", | |
"DE": "Tryptophan operon leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00513" | |
} | |
] | |
}, | |
"RF00514": { | |
"AC": "RF00514", | |
"ID": "His_leader", | |
"DE": "Histidine operon leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00514" | |
} | |
] | |
}, | |
"RF00515": { | |
"AC": "RF00515", | |
"ID": "PyrR", | |
"DE": "PyrR binding site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00515" | |
} | |
] | |
}, | |
"RF00516": { | |
"AC": "RF00516", | |
"ID": "ylbH", | |
"DE": "ylbH leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00516" | |
} | |
] | |
}, | |
"RF00517": { | |
"AC": "RF00517", | |
"ID": "serC", | |
"DE": "serC leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00517" | |
} | |
] | |
}, | |
"RF00518": { | |
"AC": "RF00518", | |
"ID": "speF", | |
"DE": "speF leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00518" | |
} | |
] | |
}, | |
"RF00519": { | |
"AC": "RF00519", | |
"ID": "suhB", | |
"DE": "suhB", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "suhB" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00519" | |
} | |
] | |
}, | |
"RF00520": { | |
"AC": "RF00520", | |
"ID": "ybhL", | |
"DE": "ybhL leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00520" | |
} | |
] | |
}, | |
"RF00521": { | |
"AC": "RF00521", | |
"ID": "SAM_alpha", | |
"DE": "SAM riboswitch (alpha-proteobacteria)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00521" | |
} | |
] | |
}, | |
"RF00522": { | |
"AC": "RF00522", | |
"ID": "PreQ1", | |
"DE": "PreQ1 riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00522" | |
} | |
] | |
}, | |
"RF00523": { | |
"AC": "RF00523", | |
"ID": "Prion_pknot", | |
"DE": "Prion pseudoknot", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00523" | |
} | |
] | |
}, | |
"RF00524": { | |
"AC": "RF00524", | |
"ID": "R2_retro_el", | |
"DE": "R2 RNA element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00524" | |
} | |
] | |
}, | |
"RF00525": { | |
"AC": "RF00525", | |
"ID": "Flavivirus_DB", | |
"DE": "Flavivirus DB element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00525" | |
} | |
] | |
}, | |
"RF00526": { | |
"AC": "RF00526", | |
"ID": "snoMe28S-U3344", | |
"DE": "Small nucleolar RNA Me28S-U3344", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-U3344" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00526" | |
} | |
] | |
}, | |
"RF00527": { | |
"AC": "RF00527", | |
"ID": "snoMe28S-G3255", | |
"DE": "Small nucleolar RNA Me28S-Gm3255", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Gm3255" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00527" | |
} | |
] | |
}, | |
"RF00528": { | |
"AC": "RF00528", | |
"ID": "snoMe28S-Gm1083", | |
"DE": "Small nucleolar RNA Me28S-Gm1083", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Gm1083" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00528" | |
} | |
] | |
}, | |
"RF00529": { | |
"AC": "RF00529", | |
"ID": "snoMe28S-Am2589", | |
"DE": "Small nucleolar RNA Me28S-Am2589", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Am2589" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00529" | |
} | |
] | |
}, | |
"RF00530": { | |
"AC": "RF00530", | |
"ID": "snoMe28S-Cm2645", | |
"DE": "Small nucleolar RNA Me28S-Cm2645", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Cm2645" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00530" | |
} | |
] | |
}, | |
"RF00531": { | |
"AC": "RF00531", | |
"ID": "snoMe28S-Gm3113", | |
"DE": "Small nucleolar RNA Me28S-Gm3113", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Gm3113" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00531" | |
} | |
] | |
}, | |
"RF00532": { | |
"AC": "RF00532", | |
"ID": "snoMe18S-Um1356", | |
"DE": "Small nucleolar RNA Me18S-Um1356", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me18S-Um1356" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00532" | |
} | |
] | |
}, | |
"RF00533": { | |
"AC": "RF00533", | |
"ID": "snoMe18S-Gm1358", | |
"DE": "Small nucleolar RNA Me18S-Gm1358", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me18S-Gm1358" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00533" | |
} | |
] | |
}, | |
"RF00534": { | |
"AC": "RF00534", | |
"ID": "SgrS", | |
"DE": "SgrS RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "SgrS RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00534" | |
} | |
] | |
}, | |
"RF00535": { | |
"AC": "RF00535", | |
"ID": "snoMe28S-Am982", | |
"DE": "Small nucleolar RNA Me28S-Am982", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Am982" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00535" | |
} | |
] | |
}, | |
"RF00536": { | |
"AC": "RF00536", | |
"ID": "snoMe28S-Cm3227", | |
"DE": "Small nucleolar RNA Me28S-Cm3227", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Cm3227" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00536" | |
} | |
] | |
}, | |
"RF00537": { | |
"AC": "RF00537", | |
"ID": "snoMe28S-Am2634", | |
"DE": "Small nucleolar RNA Me28S-Am2634", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Am2634" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00537" | |
} | |
] | |
}, | |
"RF00538": { | |
"AC": "RF00538", | |
"ID": "snoCD11", | |
"DE": "Small nucleolar RNA CD11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA CD11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00538" | |
} | |
] | |
}, | |
"RF00539": { | |
"AC": "RF00539", | |
"ID": "snoMe28S-Cm788", | |
"DE": "Small nucleolar RNA Me28S-Cm788", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Me28S-Cm788" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00539" | |
} | |
] | |
}, | |
"RF00540": { | |
"AC": "RF00540", | |
"ID": "snopsi18S-1854", | |
"DE": "Small nucleolar RNA psi18S-1854", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi18S-1854" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00540" | |
} | |
] | |
}, | |
"RF00541": { | |
"AC": "RF00541", | |
"ID": "snopsi28S-2876", | |
"DE": "Small nucleolar RNA psi28S-2876", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi28S-2876" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00541" | |
} | |
] | |
}, | |
"RF00542": { | |
"AC": "RF00542", | |
"ID": "snopsi28S-1192", | |
"DE": "Small nucleolar RNA psi28S-1192", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi28S-1192" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00542" | |
} | |
] | |
}, | |
"RF00543": { | |
"AC": "RF00543", | |
"ID": "snopsi18S-1377", | |
"DE": "Small nucleolar RNA psi18S-1377", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi18S-1377" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00543" | |
} | |
] | |
}, | |
"RF00544": { | |
"AC": "RF00544", | |
"ID": "snopsi28S-3327", | |
"DE": "Small nucleolar RNA psi28S-3327", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi28S-3327" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00544" | |
} | |
] | |
}, | |
"RF00545": { | |
"AC": "RF00545", | |
"ID": "snopsi18S-841", | |
"DE": "Small nucleolar RNA psi18S-841/snoR66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi18S-841/snoR66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00545" | |
} | |
] | |
}, | |
"RF00546": { | |
"AC": "RF00546", | |
"ID": "snopsi28S-3316", | |
"DE": "Small nucleolar RNA psi28S-3316", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA psi28S-3316" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00546" | |
} | |
] | |
}, | |
"RF00547": { | |
"AC": "RF00547", | |
"ID": "IRES_TrkB", | |
"DE": "TrkB IRES", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00547" | |
} | |
] | |
}, | |
"RF00548": { | |
"AC": "RF00548", | |
"ID": "U11", | |
"DE": "U11 spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U11 spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00548" | |
} | |
] | |
}, | |
"RF00549": { | |
"AC": "RF00549", | |
"ID": "IRES_c-sis", | |
"DE": "c-sis internal ribosome entry site (IRES)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00549" | |
} | |
] | |
}, | |
"RF00550": { | |
"AC": "RF00550", | |
"ID": "HepE_CRE", | |
"DE": "Hepatitis E virus cis-reactive element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00550" | |
} | |
] | |
}, | |
"RF00551": { | |
"AC": "RF00551", | |
"ID": "bicoid_3", | |
"DE": "Bicoid 3'-UTR regulatory element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00551" | |
} | |
] | |
}, | |
"RF00552": { | |
"AC": "RF00552", | |
"ID": "rncO", | |
"DE": "rncO", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00552" | |
} | |
] | |
}, | |
"RF00553": { | |
"AC": "RF00553", | |
"ID": "SCARNA1", | |
"DE": "Small Cajal body specific RNA 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00553" | |
} | |
] | |
}, | |
"RF00554": { | |
"AC": "RF00554", | |
"ID": "SNORA48", | |
"DE": "Small nucleolar RNA SNORA48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00554" | |
} | |
] | |
}, | |
"RF00555": { | |
"AC": "RF00555", | |
"ID": "L13_leader", | |
"DE": "Ribosomal protein L13 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00555" | |
} | |
] | |
}, | |
"RF00556": { | |
"AC": "RF00556", | |
"ID": "L19_leader", | |
"DE": "Ribosomal protein L19 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00556" | |
} | |
] | |
}, | |
"RF00557": { | |
"AC": "RF00557", | |
"ID": "L10_leader", | |
"DE": "Ribosomal protein L10 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00557" | |
} | |
] | |
}, | |
"RF00558": { | |
"AC": "RF00558", | |
"ID": "L20_leader", | |
"DE": "Ribosomal protein L20 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00558" | |
} | |
] | |
}, | |
"RF00559": { | |
"AC": "RF00559", | |
"ID": "L21_leader", | |
"DE": "Ribosomal protein L21 leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00559" | |
} | |
] | |
}, | |
"RF00560": { | |
"AC": "RF00560", | |
"ID": "SNORA17", | |
"DE": "Small nucleolar RNA SNORA17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00560" | |
} | |
] | |
}, | |
"RF00561": { | |
"AC": "RF00561", | |
"ID": "SNORA40", | |
"DE": "Small nucleolar RNA SNORA40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00561" | |
} | |
] | |
}, | |
"RF00562": { | |
"AC": "RF00562", | |
"ID": "SNORA49", | |
"DE": "Small nucleolar RNA SNORA49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00562" | |
} | |
] | |
}, | |
"RF00563": { | |
"AC": "RF00563", | |
"ID": "SNORA53", | |
"DE": "Small nucleolar RNA SNORA53", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA53" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00563" | |
} | |
] | |
}, | |
"RF00564": { | |
"AC": "RF00564", | |
"ID": "SCARNA11", | |
"DE": "Small Cajal body specific RNA 11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00564" | |
} | |
] | |
}, | |
"RF00565": { | |
"AC": "RF00565", | |
"ID": "SCARNA3", | |
"DE": "Small Cajal body specific RNA 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00565" | |
} | |
] | |
}, | |
"RF00566": { | |
"AC": "RF00566", | |
"ID": "SNORA35", | |
"DE": "Small nucleolar RNA SNORA35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00566" | |
} | |
] | |
}, | |
"RF00567": { | |
"AC": "RF00567", | |
"ID": "SNORD17", | |
"DE": "Small nucleolar RNA SNORD17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00567" | |
} | |
] | |
}, | |
"RF00568": { | |
"AC": "RF00568", | |
"ID": "SNORA26", | |
"DE": "Small nucleolar RNA SNORA26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00568" | |
} | |
] | |
}, | |
"RF00569": { | |
"AC": "RF00569", | |
"ID": "SNORD19", | |
"DE": "Small nucleolar RNA SNORD19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00569" | |
} | |
] | |
}, | |
"RF00570": { | |
"AC": "RF00570", | |
"ID": "SNORD64", | |
"DE": "Small Nucleolar RNA SNORD64", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Nucleolar RNA SNORD64" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00570" | |
} | |
] | |
}, | |
"RF00571": { | |
"AC": "RF00571", | |
"ID": "SNORD65", | |
"DE": "Small nucleolar RNA SNORD65", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD65" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00571" | |
} | |
] | |
}, | |
"RF00572": { | |
"AC": "RF00572", | |
"ID": "SNORD66", | |
"DE": "Small nucleolar RNA SNORD66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00572" | |
} | |
] | |
}, | |
"RF00573": { | |
"AC": "RF00573", | |
"ID": "SNORD67", | |
"DE": "Small nucleolar RNA SNORD67", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD67" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00573" | |
} | |
] | |
}, | |
"RF00574": { | |
"AC": "RF00574", | |
"ID": "SNORD69", | |
"DE": "Small nucleolar RNA SNORD69", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD69" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00574" | |
} | |
] | |
}, | |
"RF00575": { | |
"AC": "RF00575", | |
"ID": "SNORD70", | |
"DE": "Small nucleolar RNA SNORD70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00575" | |
} | |
] | |
}, | |
"RF00576": { | |
"AC": "RF00576", | |
"ID": "SNORD71", | |
"DE": "Small nucleolar RNA SNORD71", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD71" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00576" | |
} | |
] | |
}, | |
"RF00577": { | |
"AC": "RF00577", | |
"ID": "SNORD72", | |
"DE": "Small nucleolar RNA SNORD72", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD72" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00577" | |
} | |
] | |
}, | |
"RF00578": { | |
"AC": "RF00578", | |
"ID": "SNORD89", | |
"DE": "Small nucleolar RNA SNORD89", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD89" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00578" | |
} | |
] | |
}, | |
"RF00579": { | |
"AC": "RF00579", | |
"ID": "SNORD90", | |
"DE": "Small nucleolar RNA SNORD90", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD90" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00579" | |
} | |
] | |
}, | |
"RF00580": { | |
"AC": "RF00580", | |
"ID": "SNORD91", | |
"DE": "Small nucleolar RNA SNORD91 family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD91 family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00580" | |
} | |
] | |
}, | |
"RF00581": { | |
"AC": "RF00581", | |
"ID": "SNORD12", | |
"DE": "Small nucleolar SNORD12/SNORD106", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar SNORD12/SNORD106" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00581" | |
} | |
] | |
}, | |
"RF00582": { | |
"AC": "RF00582", | |
"ID": "SCARNA14", | |
"DE": "Small Cajal body specific RNA 14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00582" | |
} | |
] | |
}, | |
"RF00584": { | |
"AC": "RF00584", | |
"ID": "SNORD105", | |
"DE": "Small nucleolar RNA SNORD105", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD105" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00584" | |
} | |
] | |
}, | |
"RF00586": { | |
"AC": "RF00586", | |
"ID": "SNORA12", | |
"DE": "Small nucleolar RNA SNORA12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00586" | |
} | |
] | |
}, | |
"RF00588": { | |
"AC": "RF00588", | |
"ID": "SNORD41", | |
"DE": "Small nucleolar RNA SNORD41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00588" | |
} | |
] | |
}, | |
"RF00591": { | |
"AC": "RF00591", | |
"ID": "SNORD77", | |
"DE": "Small nucleolar RNA SNORD77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00591" | |
} | |
] | |
}, | |
"RF00592": { | |
"AC": "RF00592", | |
"ID": "SNORD78", | |
"DE": "Small nucleolar RNA SNORD78", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD78" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00592" | |
} | |
] | |
}, | |
"RF00593": { | |
"AC": "RF00593", | |
"ID": "snoU83B", | |
"DE": "Small nucleolar RNA U83B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U83B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00593" | |
} | |
] | |
}, | |
"RF00594": { | |
"AC": "RF00594", | |
"ID": "SNORD86", | |
"DE": "Small nucleolar RNA SNORD86", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD86" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00594" | |
} | |
] | |
}, | |
"RF00598": { | |
"AC": "RF00598", | |
"ID": "SNORA76", | |
"DE": "Small nucleolar RNA SNORA76", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA76" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00598" | |
} | |
] | |
}, | |
"RF00599": { | |
"AC": "RF00599", | |
"ID": "SNORA77", | |
"DE": "Small nucleolar RNA SNORA77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00599" | |
} | |
] | |
}, | |
"RF00600": { | |
"AC": "RF00600", | |
"ID": "SNORA79", | |
"DE": "Small nucleolar RNA SNORA79", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA79" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00600" | |
} | |
] | |
}, | |
"RF00601": { | |
"AC": "RF00601", | |
"ID": "SCARNA20", | |
"DE": "Small Cajal body specific RNA 20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00601" | |
} | |
] | |
}, | |
"RF00602": { | |
"AC": "RF00602", | |
"ID": "SCARNA21", | |
"DE": "Small Cajal body specific RNA 21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body specific RNA 21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00602" | |
} | |
] | |
}, | |
"RF00603": { | |
"AC": "RF00603", | |
"ID": "SNORD23", | |
"DE": "Small nucleolar RNA SNORD23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00603" | |
} | |
] | |
}, | |
"RF00604": { | |
"AC": "RF00604", | |
"ID": "SNORD88", | |
"DE": "Small nucleolar RNA SNORD88", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD88" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00604" | |
} | |
] | |
}, | |
"RF00606": { | |
"AC": "RF00606", | |
"ID": "SNORD93", | |
"DE": "Small nucleolar RNA SNORD93", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD93" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00606" | |
} | |
] | |
}, | |
"RF00607": { | |
"AC": "RF00607", | |
"ID": "SNORD98", | |
"DE": "Small nucleolar RNA SNORD98", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD98" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00607" | |
} | |
] | |
}, | |
"RF00608": { | |
"AC": "RF00608", | |
"ID": "SNORD99", | |
"DE": "Small nucleolar RNA SNORD99", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD99" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00608" | |
} | |
] | |
}, | |
"RF00609": { | |
"AC": "RF00609", | |
"ID": "SNORD100", | |
"DE": "Small nucleolar RNA SNORD100", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD100" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00609" | |
} | |
] | |
}, | |
"RF00610": { | |
"AC": "RF00610", | |
"ID": "SNORD110", | |
"DE": "Small nucleolar RNA SNORD110", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD110" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00610" | |
} | |
] | |
}, | |
"RF00611": { | |
"AC": "RF00611", | |
"ID": "SNORD111", | |
"DE": "Small nucleolar RNA SNORD111", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD111" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00611" | |
} | |
] | |
}, | |
"RF00612": { | |
"AC": "RF00612", | |
"ID": "SNORD75", | |
"DE": "Small nucleolar RNA SNORD75", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD75" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00612" | |
} | |
] | |
}, | |
"RF00613": { | |
"AC": "RF00613", | |
"ID": "SNORD94", | |
"DE": "Small nucleolar RNA SNORD94", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD94" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00613" | |
} | |
] | |
}, | |
"RF00614": { | |
"AC": "RF00614", | |
"ID": "SNORA11", | |
"DE": "Small nucleolar RNA SNORA11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00614" | |
} | |
] | |
}, | |
"RF00615": { | |
"AC": "RF00615", | |
"ID": "LhrA", | |
"DE": "Listeria Hfq binding LhrA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria Hfq binding LhrA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00615" | |
} | |
] | |
}, | |
"RF00616": { | |
"AC": "RF00616", | |
"ID": "LhrC", | |
"DE": "Listeria Hfq binding LhrC", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria Hfq binding LhrC" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00616" | |
} | |
] | |
}, | |
"RF00617": { | |
"AC": "RF00617", | |
"ID": "cHP", | |
"DE": "flavivirus capsid hairpin cHP", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00617" | |
} | |
] | |
}, | |
"RF00618": { | |
"AC": "RF00618", | |
"ID": "U4atac", | |
"DE": "U4atac minor spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U4atac minor spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00618" | |
} | |
] | |
}, | |
"RF00619": { | |
"AC": "RF00619", | |
"ID": "U6atac", | |
"DE": "U6atac minor spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "U6atac minor spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00619" | |
} | |
] | |
}, | |
"RF00620": { | |
"AC": "RF00620", | |
"ID": "HCV_ARF_SL", | |
"DE": "Hepatitis C alternative reading frame stem-loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00620" | |
} | |
] | |
}, | |
"RF00621": { | |
"AC": "RF00621", | |
"ID": "CoTC_ribozyme", | |
"DE": "Beta-globin co-transcriptional cleavage ribozyme", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Beta-globin co-transcriptional cleavage ribozyme" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00621" | |
} | |
] | |
}, | |
"RF00622": { | |
"AC": "RF00622", | |
"ID": "CPEB3_ribozyme", | |
"DE": "Mammalian CPEB3 ribozyme", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Mammalian CPEB3 ribozyme" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00622" | |
} | |
] | |
}, | |
"RF00623": { | |
"AC": "RF00623", | |
"ID": "P1", | |
"DE": "Pseudomonas sRNA P1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00623" | |
} | |
] | |
}, | |
"RF00624": { | |
"AC": "RF00624", | |
"ID": "P9", | |
"DE": "Pseudomonas sRNA P9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00624" | |
} | |
] | |
}, | |
"RF00625": { | |
"AC": "RF00625", | |
"ID": "P11", | |
"DE": "Pseudomonas sRNA P11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00625" | |
} | |
] | |
}, | |
"RF00626": { | |
"AC": "RF00626", | |
"ID": "Gurken", | |
"DE": "Gurken localisation signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00626" | |
} | |
] | |
}, | |
"RF00627": { | |
"AC": "RF00627", | |
"ID": "P15", | |
"DE": "Pseudomonas sRNA P15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00627" | |
} | |
] | |
}, | |
"RF00628": { | |
"AC": "RF00628", | |
"ID": "P16", | |
"DE": "Pseudomonas sRNA P16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00628" | |
} | |
] | |
}, | |
"RF00629": { | |
"AC": "RF00629", | |
"ID": "P24", | |
"DE": "Pseudomonas sRNA P24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00629" | |
} | |
] | |
}, | |
"RF00630": { | |
"AC": "RF00630", | |
"ID": "P26", | |
"DE": "Pseudomonas sRNA P26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00630" | |
} | |
] | |
}, | |
"RF00632": { | |
"AC": "RF00632", | |
"ID": "sxy", | |
"DE": "sxy 5' UTR element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00632" | |
} | |
] | |
}, | |
"RF00634": { | |
"AC": "RF00634", | |
"ID": "SAM-IV", | |
"DE": "S-adenosyl methionine (SAM) riboswitch,", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00634" | |
} | |
] | |
}, | |
"RF00635": { | |
"AC": "RF00635", | |
"ID": "HAR1A", | |
"DE": "Highly accelerated region 1A/1B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Highly accelerated region 1A/1B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00635" | |
} | |
] | |
}, | |
"RF00636": { | |
"AC": "RF00636", | |
"ID": "NRON", | |
"DE": "ncRNA Repressor of NFAT (nuclear factor of activated T cells)", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ncRNA Repressor of NFAT (nuclear factor of activated T cells)" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00636" | |
} | |
] | |
}, | |
"RF00637": { | |
"AC": "RF00637", | |
"ID": "mir-276", | |
"DE": "microRNA mir-276", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-276" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00637" | |
} | |
] | |
}, | |
"RF00638": { | |
"AC": "RF00638", | |
"ID": "MIR159", | |
"DE": "microRNA MIR159", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR159" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00638" | |
} | |
] | |
}, | |
"RF00639": { | |
"AC": "RF00639", | |
"ID": "mir-515", | |
"DE": "microRNA mir-515", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-515" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00639" | |
} | |
] | |
}, | |
"RF00640": { | |
"AC": "RF00640", | |
"ID": "MIR167_1", | |
"DE": "microRNA MIR167_1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR167_1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00640" | |
} | |
] | |
}, | |
"RF00641": { | |
"AC": "RF00641", | |
"ID": "mir-154", | |
"DE": "microRNA mir-154", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-154" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00641" | |
} | |
] | |
}, | |
"RF00642": { | |
"AC": "RF00642", | |
"ID": "mir-23", | |
"DE": "microRNA mir-23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00642" | |
} | |
] | |
}, | |
"RF00643": { | |
"AC": "RF00643", | |
"ID": "MIR171_1", | |
"DE": "microRNA MIR171_1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR171_1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00643" | |
} | |
] | |
}, | |
"RF00644": { | |
"AC": "RF00644", | |
"ID": "mir-27", | |
"DE": "microRNA mir-27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00644" | |
} | |
] | |
}, | |
"RF00645": { | |
"AC": "RF00645", | |
"ID": "MIR169_2", | |
"DE": "microRNA MIR169_2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR169_2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00645" | |
} | |
] | |
}, | |
"RF00646": { | |
"AC": "RF00646", | |
"ID": "mir-204", | |
"DE": "microRNA mir-204", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-204" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00646" | |
} | |
] | |
}, | |
"RF00647": { | |
"AC": "RF00647", | |
"ID": "MIR164", | |
"DE": "microRNA MIR164", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR164" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00647" | |
} | |
] | |
}, | |
"RF00648": { | |
"AC": "RF00648", | |
"ID": "MIR396", | |
"DE": "microRNA MIR396", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR396" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00648" | |
} | |
] | |
}, | |
"RF00649": { | |
"AC": "RF00649", | |
"ID": "mir-128", | |
"DE": "microRNA mir-128", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-128" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00649" | |
} | |
] | |
}, | |
"RF00650": { | |
"AC": "RF00650", | |
"ID": "mir-153", | |
"DE": "microRNA mir-153", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-153" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00650" | |
} | |
] | |
}, | |
"RF00651": { | |
"AC": "RF00651", | |
"ID": "mir-221", | |
"DE": "microRNA mir-221", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-221" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00651" | |
} | |
] | |
}, | |
"RF00652": { | |
"AC": "RF00652", | |
"ID": "MIR478", | |
"DE": "microRNA MIR478", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR478" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00652" | |
} | |
] | |
}, | |
"RF00653": { | |
"AC": "RF00653", | |
"ID": "mir-22", | |
"DE": "microRNA mir-22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00653" | |
} | |
] | |
}, | |
"RF00654": { | |
"AC": "RF00654", | |
"ID": "mir-216", | |
"DE": "microRNA mir-216", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-216" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00654" | |
} | |
] | |
}, | |
"RF00655": { | |
"AC": "RF00655", | |
"ID": "mir-28", | |
"DE": "microRNA mir-28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00655" | |
} | |
] | |
}, | |
"RF00656": { | |
"AC": "RF00656", | |
"ID": "mir-205", | |
"DE": "microRNA mir-205", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-205" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00656" | |
} | |
] | |
}, | |
"RF00657": { | |
"AC": "RF00657", | |
"ID": "mir-184", | |
"DE": "microRNA mir-184", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-184" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00657" | |
} | |
] | |
}, | |
"RF00658": { | |
"AC": "RF00658", | |
"ID": "mir-21", | |
"DE": "microRNA mir-21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00658" | |
} | |
] | |
}, | |
"RF00659": { | |
"AC": "RF00659", | |
"ID": "mir-365", | |
"DE": "microRNA mir-365", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-365" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00659" | |
} | |
] | |
}, | |
"RF00660": { | |
"AC": "RF00660", | |
"ID": "mir-214", | |
"DE": "microRNA mir-214", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-214" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00660" | |
} | |
] | |
}, | |
"RF00661": { | |
"AC": "RF00661", | |
"ID": "mir-31", | |
"DE": "microRNA mir-31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00661" | |
} | |
] | |
}, | |
"RF00662": { | |
"AC": "RF00662", | |
"ID": "mir-132", | |
"DE": "microRNA mir-132", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-132" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00662" | |
} | |
] | |
}, | |
"RF00663": { | |
"AC": "RF00663", | |
"ID": "mir-183", | |
"DE": "microRNA mir-183", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-183" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00663" | |
} | |
] | |
}, | |
"RF00664": { | |
"AC": "RF00664", | |
"ID": "mir-223", | |
"DE": "microRNA mir-223", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-223" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00664" | |
} | |
] | |
}, | |
"RF00665": { | |
"AC": "RF00665", | |
"ID": "mir-290", | |
"DE": "microRNA mir-290", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-290" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00665" | |
} | |
] | |
}, | |
"RF00666": { | |
"AC": "RF00666", | |
"ID": "mir-32", | |
"DE": "microRNA mir-32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00666" | |
} | |
] | |
}, | |
"RF00667": { | |
"AC": "RF00667", | |
"ID": "mir-33", | |
"DE": "microRNA mir-33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00667" | |
} | |
] | |
}, | |
"RF00668": { | |
"AC": "RF00668", | |
"ID": "mir-302", | |
"DE": "microRNA mir-302", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-302" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00668" | |
} | |
] | |
}, | |
"RF00669": { | |
"AC": "RF00669", | |
"ID": "mir-96", | |
"DE": "microRNA mir-96", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-96" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00669" | |
} | |
] | |
}, | |
"RF00670": { | |
"AC": "RF00670", | |
"ID": "mir-105", | |
"DE": "microRNA mir-105", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-105" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00670" | |
} | |
] | |
}, | |
"RF00671": { | |
"AC": "RF00671", | |
"ID": "mir-138", | |
"DE": "microRNA mir-138", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-138" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00671" | |
} | |
] | |
}, | |
"RF00672": { | |
"AC": "RF00672", | |
"ID": "mir-190", | |
"DE": "microRNA mir-190", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-190" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00672" | |
} | |
] | |
}, | |
"RF00673": { | |
"AC": "RF00673", | |
"ID": "mir-217", | |
"DE": "microRNA mir-217", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-217" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00673" | |
} | |
] | |
}, | |
"RF00674": { | |
"AC": "RF00674", | |
"ID": "mir-187", | |
"DE": "microRNA mir-187", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-187" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00674" | |
} | |
] | |
}, | |
"RF00675": { | |
"AC": "RF00675", | |
"ID": "mir-145", | |
"DE": "microRNA mir-145", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-145" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00675" | |
} | |
] | |
}, | |
"RF00676": { | |
"AC": "RF00676", | |
"ID": "mir-127", | |
"DE": "microRNA mir-127", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-127" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00676" | |
} | |
] | |
}, | |
"RF00677": { | |
"AC": "RF00677", | |
"ID": "MIR168", | |
"DE": "microRNA MIR168", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR168" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00677" | |
} | |
] | |
}, | |
"RF00678": { | |
"AC": "RF00678", | |
"ID": "mir-140", | |
"DE": "microRNA mir-140", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-140" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00678" | |
} | |
] | |
}, | |
"RF00679": { | |
"AC": "RF00679", | |
"ID": "mir-210", | |
"DE": "microRNA mir-210", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-210" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00679" | |
} | |
] | |
}, | |
"RF00680": { | |
"AC": "RF00680", | |
"ID": "mir-224", | |
"DE": "microRNA mir-224", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-224" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00680" | |
} | |
] | |
}, | |
"RF00681": { | |
"AC": "RF00681", | |
"ID": "mir-198", | |
"DE": "microRNA mir-198", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-198" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00681" | |
} | |
] | |
}, | |
"RF00682": { | |
"AC": "RF00682", | |
"ID": "mir-144", | |
"DE": "microRNA mir-144", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-144" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00682" | |
} | |
] | |
}, | |
"RF00683": { | |
"AC": "RF00683", | |
"ID": "mir-143", | |
"DE": "microRNA mir-143", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-143" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00683" | |
} | |
] | |
}, | |
"RF00684": { | |
"AC": "RF00684", | |
"ID": "mir-122", | |
"DE": "mir-122 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-122 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00684" | |
} | |
] | |
}, | |
"RF00685": { | |
"AC": "RF00685", | |
"ID": "mir-36", | |
"DE": "microRNA mir-36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00685" | |
} | |
] | |
}, | |
"RF00686": { | |
"AC": "RF00686", | |
"ID": "mir-338", | |
"DE": "microRNA mir-338", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-338" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00686" | |
} | |
] | |
}, | |
"RF00687": { | |
"AC": "RF00687", | |
"ID": "mir-136", | |
"DE": "microRNA mir-136", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-136" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00687" | |
} | |
] | |
}, | |
"RF00688": { | |
"AC": "RF00688", | |
"ID": "MIR394", | |
"DE": "microRNA MIR394", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR394" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00688" | |
} | |
] | |
}, | |
"RF00689": { | |
"AC": "RF00689", | |
"ID": "MIR390", | |
"DE": "microRNA MIR390", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR390" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00689" | |
} | |
] | |
}, | |
"RF00690": { | |
"AC": "RF00690", | |
"ID": "MIR408", | |
"DE": "microRNA MIR408", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR408" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00690" | |
} | |
] | |
}, | |
"RF00691": { | |
"AC": "RF00691", | |
"ID": "mir-146", | |
"DE": "microRNA mir-146", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-146" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00691" | |
} | |
] | |
}, | |
"RF00692": { | |
"AC": "RF00692", | |
"ID": "MIR171_2", | |
"DE": "microRNA MIR171_2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR171_2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00692" | |
} | |
] | |
}, | |
"RF00693": { | |
"AC": "RF00693", | |
"ID": "mir-147", | |
"DE": "microRNA mir-147", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-147" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00693" | |
} | |
] | |
}, | |
"RF00694": { | |
"AC": "RF00694", | |
"ID": "mir-137", | |
"DE": "microRNA mir-137", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-137" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00694" | |
} | |
] | |
}, | |
"RF00695": { | |
"AC": "RF00695", | |
"ID": "MIR398", | |
"DE": "microRNA MIR398", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR398" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00695" | |
} | |
] | |
}, | |
"RF00696": { | |
"AC": "RF00696", | |
"ID": "mir-203", | |
"DE": "microRNA mir-203", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-203" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00696" | |
} | |
] | |
}, | |
"RF00697": { | |
"AC": "RF00697", | |
"ID": "mir-186", | |
"DE": "microRNA mir-186", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-186" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00697" | |
} | |
] | |
}, | |
"RF00698": { | |
"AC": "RF00698", | |
"ID": "mir-489", | |
"DE": "microRNA mir-489", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-489" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00698" | |
} | |
] | |
}, | |
"RF00699": { | |
"AC": "RF00699", | |
"ID": "mir-134", | |
"DE": "microRNA mir-134", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-134" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00699" | |
} | |
] | |
}, | |
"RF00700": { | |
"AC": "RF00700", | |
"ID": "mir-375", | |
"DE": "microRNA mir-375", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-375" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00700" | |
} | |
] | |
}, | |
"RF00701": { | |
"AC": "RF00701", | |
"ID": "mir-126", | |
"DE": "microRNA mir-126", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-126" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00701" | |
} | |
] | |
}, | |
"RF00702": { | |
"AC": "RF00702", | |
"ID": "mir-182", | |
"DE": "microRNA mir-182", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-182" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00702" | |
} | |
] | |
}, | |
"RF00703": { | |
"AC": "RF00703", | |
"ID": "mir-139", | |
"DE": "microRNA mir-139", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-139" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00703" | |
} | |
] | |
}, | |
"RF00704": { | |
"AC": "RF00704", | |
"ID": "MIR397", | |
"DE": "microRNA MIR397", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR397" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00704" | |
} | |
] | |
}, | |
"RF00705": { | |
"AC": "RF00705", | |
"ID": "mir-202", | |
"DE": "microRNA mir-202", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-202" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00705" | |
} | |
] | |
}, | |
"RF00706": { | |
"AC": "RF00706", | |
"ID": "mir-263", | |
"DE": "microRNA mir-263", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-263" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00706" | |
} | |
] | |
}, | |
"RF00707": { | |
"AC": "RF00707", | |
"ID": "mir-197", | |
"DE": "microRNA mir-197", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-197" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00707" | |
} | |
] | |
}, | |
"RF00708": { | |
"AC": "RF00708", | |
"ID": "mir-450", | |
"DE": "microRNA mir-450", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-450" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00708" | |
} | |
] | |
}, | |
"RF00709": { | |
"AC": "RF00709", | |
"ID": "mir-455", | |
"DE": "microRNA mir-455", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-455" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00709" | |
} | |
] | |
}, | |
"RF00710": { | |
"AC": "RF00710", | |
"ID": "mir-44", | |
"DE": "microRNA mir-44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00710" | |
} | |
] | |
}, | |
"RF00711": { | |
"AC": "RF00711", | |
"ID": "mir-449", | |
"DE": "microRNA mir-449", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-449" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00711" | |
} | |
] | |
}, | |
"RF00712": { | |
"AC": "RF00712", | |
"ID": "mir-460", | |
"DE": "microRNA mir-460", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-460" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00712" | |
} | |
] | |
}, | |
"RF00713": { | |
"AC": "RF00713", | |
"ID": "mir-239", | |
"DE": "microRNA mir-239", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-239" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00713" | |
} | |
] | |
}, | |
"RF00714": { | |
"AC": "RF00714", | |
"ID": "MIR535", | |
"DE": "microRNA MIR535", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR535" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00714" | |
} | |
] | |
}, | |
"RF00715": { | |
"AC": "RF00715", | |
"ID": "mir-383", | |
"DE": "microRNA mir-383", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-383" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00715" | |
} | |
] | |
}, | |
"RF00716": { | |
"AC": "RF00716", | |
"ID": "mir-3", | |
"DE": "microRNA mir-3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00716" | |
} | |
] | |
}, | |
"RF00717": { | |
"AC": "RF00717", | |
"ID": "mir-315", | |
"DE": "microRNA mir-315", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-315" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00717" | |
} | |
] | |
}, | |
"RF00718": { | |
"AC": "RF00718", | |
"ID": "mir-431", | |
"DE": "microRNA mir-431", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-431" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00718" | |
} | |
] | |
}, | |
"RF00719": { | |
"AC": "RF00719", | |
"ID": "mir-326", | |
"DE": "microRNA mir-326", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-326" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00719" | |
} | |
] | |
}, | |
"RF00720": { | |
"AC": "RF00720", | |
"ID": "mir-317", | |
"DE": "microRNA mir-317", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-317" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00720" | |
} | |
] | |
}, | |
"RF00721": { | |
"AC": "RF00721", | |
"ID": "MIR475", | |
"DE": "microRNA MIR475", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR475" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00721" | |
} | |
] | |
}, | |
"RF00722": { | |
"AC": "RF00722", | |
"ID": "mir-451", | |
"DE": "microRNA mir-451", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-451" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00722" | |
} | |
] | |
}, | |
"RF00723": { | |
"AC": "RF00723", | |
"ID": "mir-448", | |
"DE": "microRNA mir-448", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-448" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00723" | |
} | |
] | |
}, | |
"RF00724": { | |
"AC": "RF00724", | |
"ID": "mir-282", | |
"DE": "microRNA mir-282", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-282" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00724" | |
} | |
] | |
}, | |
"RF00725": { | |
"AC": "RF00725", | |
"ID": "mir-iab-4", | |
"DE": "microRNA mir-iab-4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-iab-4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00725" | |
} | |
] | |
}, | |
"RF00726": { | |
"AC": "RF00726", | |
"ID": "mir-87", | |
"DE": "microRNA mir-87", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-87" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00726" | |
} | |
] | |
}, | |
"RF00727": { | |
"AC": "RF00727", | |
"ID": "bantam", | |
"DE": "microRNA bantam", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA bantam" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00727" | |
} | |
] | |
}, | |
"RF00728": { | |
"AC": "RF00728", | |
"ID": "mir-81", | |
"DE": "microRNA mir-81", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-81" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00728" | |
} | |
] | |
}, | |
"RF00729": { | |
"AC": "RF00729", | |
"ID": "mir-278", | |
"DE": "microRNA mir-278", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-278" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00729" | |
} | |
] | |
}, | |
"RF00730": { | |
"AC": "RF00730", | |
"ID": "mir-277", | |
"DE": "microRNA mir-277", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-277" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00730" | |
} | |
] | |
}, | |
"RF00731": { | |
"AC": "RF00731", | |
"ID": "mir-155", | |
"DE": "microRNA mir-155", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-155" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00731" | |
} | |
] | |
}, | |
"RF00732": { | |
"AC": "RF00732", | |
"ID": "mir-305", | |
"DE": "microRNA mir-305", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-305" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00732" | |
} | |
] | |
}, | |
"RF00733": { | |
"AC": "RF00733", | |
"ID": "mir-296", | |
"DE": "microRNA mir-296", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-296" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00733" | |
} | |
] | |
}, | |
"RF00734": { | |
"AC": "RF00734", | |
"ID": "mir-52", | |
"DE": "microRNA mir-52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00734" | |
} | |
] | |
}, | |
"RF00735": { | |
"AC": "RF00735", | |
"ID": "mir-367", | |
"DE": "microRNA mir-367", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-367" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00735" | |
} | |
] | |
}, | |
"RF00736": { | |
"AC": "RF00736", | |
"ID": "mir-320", | |
"DE": "microRNA mir-320", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-320" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00736" | |
} | |
] | |
}, | |
"RF00737": { | |
"AC": "RF00737", | |
"ID": "mir-322", | |
"DE": "microRNA mir-322", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-322" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00737" | |
} | |
] | |
}, | |
"RF00739": { | |
"AC": "RF00739", | |
"ID": "MIR476", | |
"DE": "microRNA MIR476", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR476" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00739" | |
} | |
] | |
}, | |
"RF00740": { | |
"AC": "RF00740", | |
"ID": "mir-370", | |
"DE": "microRNA mir-370", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-370" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00740" | |
} | |
] | |
}, | |
"RF00741": { | |
"AC": "RF00741", | |
"ID": "mir-378", | |
"DE": "microRNA mir-378", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-378" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00741" | |
} | |
] | |
}, | |
"RF00742": { | |
"AC": "RF00742", | |
"ID": "MIR162_2", | |
"DE": "microRNA MIR162_2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR162_2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00742" | |
} | |
] | |
}, | |
"RF00743": { | |
"AC": "RF00743", | |
"ID": "mir-308", | |
"DE": "microRNA mir-308", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-308" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00743" | |
} | |
] | |
}, | |
"RF00744": { | |
"AC": "RF00744", | |
"ID": "mir-361", | |
"DE": "microRNA mir-361", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-361" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00744" | |
} | |
] | |
}, | |
"RF00745": { | |
"AC": "RF00745", | |
"ID": "mir-499", | |
"DE": "microRNA mir-499", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-499" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00745" | |
} | |
] | |
}, | |
"RF00746": { | |
"AC": "RF00746", | |
"ID": "mir-454", | |
"DE": "microRNA mir-454", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-454" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00746" | |
} | |
] | |
}, | |
"RF00747": { | |
"AC": "RF00747", | |
"ID": "mir-283", | |
"DE": "microRNA mir-283", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-283" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00747" | |
} | |
] | |
}, | |
"RF00748": { | |
"AC": "RF00748", | |
"ID": "mir-433", | |
"DE": "microRNA mir-433", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-433" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00748" | |
} | |
] | |
}, | |
"RF00749": { | |
"AC": "RF00749", | |
"ID": "mir-208", | |
"DE": "microRNA mir-208", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-208" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00749" | |
} | |
] | |
}, | |
"RF00750": { | |
"AC": "RF00750", | |
"ID": "mir-458", | |
"DE": "microRNA mir-458", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-458" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00750" | |
} | |
] | |
}, | |
"RF00751": { | |
"AC": "RF00751", | |
"ID": "mir-12", | |
"DE": "microRNA mir-12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00751" | |
} | |
] | |
}, | |
"RF00752": { | |
"AC": "RF00752", | |
"ID": "mir-14", | |
"DE": "microRNA mir-14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00752" | |
} | |
] | |
}, | |
"RF00753": { | |
"AC": "RF00753", | |
"ID": "mir-503", | |
"DE": "microRNA mir-503", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-503" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00753" | |
} | |
] | |
}, | |
"RF00754": { | |
"AC": "RF00754", | |
"ID": "mir-279", | |
"DE": "microRNA mir-279", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-279" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00754" | |
} | |
] | |
}, | |
"RF00755": { | |
"AC": "RF00755", | |
"ID": "mir-542", | |
"DE": "microRNA mir-542", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-542" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00755" | |
} | |
] | |
}, | |
"RF00756": { | |
"AC": "RF00756", | |
"ID": "mir-299", | |
"DE": "microRNA mir-299", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-299" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00756" | |
} | |
] | |
}, | |
"RF00757": { | |
"AC": "RF00757", | |
"ID": "mir-275", | |
"DE": "microRNA mir-275", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-275" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00757" | |
} | |
] | |
}, | |
"RF00758": { | |
"AC": "RF00758", | |
"ID": "mir-346", | |
"DE": "microRNA mir-346", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-346" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00758" | |
} | |
] | |
}, | |
"RF00760": { | |
"AC": "RF00760", | |
"ID": "mir-342", | |
"DE": "microRNA mir-342", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-342" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00760" | |
} | |
] | |
}, | |
"RF00761": { | |
"AC": "RF00761", | |
"ID": "mir-340", | |
"DE": "microRNA mir-340", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-340" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00761" | |
} | |
] | |
}, | |
"RF00762": { | |
"AC": "RF00762", | |
"ID": "mir-412", | |
"DE": "microRNA mir-412", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-412" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00762" | |
} | |
] | |
}, | |
"RF00763": { | |
"AC": "RF00763", | |
"ID": "mir-339", | |
"DE": "microRNA mir-339", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-339" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00763" | |
} | |
] | |
}, | |
"RF00764": { | |
"AC": "RF00764", | |
"ID": "mir-191", | |
"DE": "microRNA mir-191", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-191" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00764" | |
} | |
] | |
}, | |
"RF00765": { | |
"AC": "RF00765", | |
"ID": "mir-337", | |
"DE": "microRNA mir-337", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-337" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00765" | |
} | |
] | |
}, | |
"RF00766": { | |
"AC": "RF00766", | |
"ID": "mir-335", | |
"DE": "microRNA mir-335", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-335" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00766" | |
} | |
] | |
}, | |
"RF00767": { | |
"AC": "RF00767", | |
"ID": "mir-150", | |
"DE": "microRNA mir-150", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-150" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00767" | |
} | |
] | |
}, | |
"RF00768": { | |
"AC": "RF00768", | |
"ID": "MIR405", | |
"DE": "microRNA MIR405", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR405" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00768" | |
} | |
] | |
}, | |
"RF00769": { | |
"AC": "RF00769", | |
"ID": "mir-331", | |
"DE": "microRNA mir-331", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-331" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00769" | |
} | |
] | |
}, | |
"RF00770": { | |
"AC": "RF00770", | |
"ID": "mir-330", | |
"DE": "microRNA mir-330", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-330" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00770" | |
} | |
] | |
}, | |
"RF00771": { | |
"AC": "RF00771", | |
"ID": "mir-185", | |
"DE": "microRNA mir-185", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-185" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00771" | |
} | |
] | |
}, | |
"RF00772": { | |
"AC": "RF00772", | |
"ID": "mir-328", | |
"DE": "microRNA mir-328", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-328" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00772" | |
} | |
] | |
}, | |
"RF00773": { | |
"AC": "RF00773", | |
"ID": "mir-298", | |
"DE": "microRNA mir-298", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-298" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00773" | |
} | |
] | |
}, | |
"RF00774": { | |
"AC": "RF00774", | |
"ID": "mir-360", | |
"DE": "microRNA mir-360", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-360" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00774" | |
} | |
] | |
}, | |
"RF00775": { | |
"AC": "RF00775", | |
"ID": "mir-432", | |
"DE": "microRNA mir-432", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-432" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00775" | |
} | |
] | |
}, | |
"RF00776": { | |
"AC": "RF00776", | |
"ID": "mir-540", | |
"DE": "microRNA mir-540", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-540" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00776" | |
} | |
] | |
}, | |
"RF00777": { | |
"AC": "RF00777", | |
"ID": "mir-541", | |
"DE": "microRNA mir-541", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-541" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00777" | |
} | |
] | |
}, | |
"RF00778": { | |
"AC": "RF00778", | |
"ID": "MIR473", | |
"DE": "microRNA MIR473", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR473" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00778" | |
} | |
] | |
}, | |
"RF00779": { | |
"AC": "RF00779", | |
"ID": "MIR474", | |
"DE": "microRNA MIR474", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR474" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00779" | |
} | |
] | |
}, | |
"RF00780": { | |
"AC": "RF00780", | |
"ID": "MIR477", | |
"DE": "microRNA MIR477", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR477" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00780" | |
} | |
] | |
}, | |
"RF00781": { | |
"AC": "RF00781", | |
"ID": "mir-505", | |
"DE": "microRNA mir-505", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-505" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00781" | |
} | |
] | |
}, | |
"RF00782": { | |
"AC": "RF00782", | |
"ID": "MIR480", | |
"DE": "microRNA MIR480", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR480" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00782" | |
} | |
] | |
}, | |
"RF00783": { | |
"AC": "RF00783", | |
"ID": "mir-484", | |
"DE": "microRNA mir-484", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-484" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00783" | |
} | |
] | |
}, | |
"RF00784": { | |
"AC": "RF00784", | |
"ID": "mir-486", | |
"DE": "microRNA mir-486", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-486" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00784" | |
} | |
] | |
}, | |
"RF00785": { | |
"AC": "RF00785", | |
"ID": "mir-90", | |
"DE": "microRNA mir-90", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-90" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00785" | |
} | |
] | |
}, | |
"RF00786": { | |
"AC": "RF00786", | |
"ID": "mir-289", | |
"DE": "microRNA mir-289", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-289" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00786" | |
} | |
] | |
}, | |
"RF00787": { | |
"AC": "RF00787", | |
"ID": "mir-288", | |
"DE": "microRNA mir-288", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-288" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00787" | |
} | |
] | |
}, | |
"RF00788": { | |
"AC": "RF00788", | |
"ID": "mir-287", | |
"DE": "microRNA mir-287", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-287" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00788" | |
} | |
] | |
}, | |
"RF00789": { | |
"AC": "RF00789", | |
"ID": "mir-286", | |
"DE": "microRNA mir-286", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-286" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00789" | |
} | |
] | |
}, | |
"RF00790": { | |
"AC": "RF00790", | |
"ID": "mir-358", | |
"DE": "microRNA mir-358", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-358" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00790" | |
} | |
] | |
}, | |
"RF00791": { | |
"AC": "RF00791", | |
"ID": "mir-357", | |
"DE": "microRNA mir-357", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-357" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00791" | |
} | |
] | |
}, | |
"RF00792": { | |
"AC": "RF00792", | |
"ID": "mir-490", | |
"DE": "microRNA mir-490", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-490" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00792" | |
} | |
] | |
}, | |
"RF00793": { | |
"AC": "RF00793", | |
"ID": "mir-497", | |
"DE": "microRNA mir-497", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-497" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00793" | |
} | |
] | |
}, | |
"RF00794": { | |
"AC": "RF00794", | |
"ID": "mir-42", | |
"DE": "microRNA mir-42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00794" | |
} | |
] | |
}, | |
"RF00795": { | |
"AC": "RF00795", | |
"ID": "mir-43", | |
"DE": "microRNA mir-43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00795" | |
} | |
] | |
}, | |
"RF00796": { | |
"AC": "RF00796", | |
"ID": "mir-48", | |
"DE": "microRNA mir-48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00796" | |
} | |
] | |
}, | |
"RF00797": { | |
"AC": "RF00797", | |
"ID": "mir-355", | |
"DE": "microRNA mir-355", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-355" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00797" | |
} | |
] | |
}, | |
"RF00798": { | |
"AC": "RF00798", | |
"ID": "mir-49", | |
"DE": "microRNA mir-49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00798" | |
} | |
] | |
}, | |
"RF00799": { | |
"AC": "RF00799", | |
"ID": "mir-354", | |
"DE": "microRNA mir-354", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-354" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00799" | |
} | |
] | |
}, | |
"RF00800": { | |
"AC": "RF00800", | |
"ID": "mir-353", | |
"DE": "microRNA mir-353", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-353" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00800" | |
} | |
] | |
}, | |
"RF00801": { | |
"AC": "RF00801", | |
"ID": "mir-280", | |
"DE": "microRNA mir-280", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-280" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00801" | |
} | |
] | |
}, | |
"RF00802": { | |
"AC": "RF00802", | |
"ID": "mir-207", | |
"DE": "microRNA mir-207", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-207" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00802" | |
} | |
] | |
}, | |
"RF00803": { | |
"AC": "RF00803", | |
"ID": "mir-425", | |
"DE": "microRNA mir-425", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-425" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00803" | |
} | |
] | |
}, | |
"RF00804": { | |
"AC": "RF00804", | |
"ID": "mir-240", | |
"DE": "microRNA mir-240", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-240" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00804" | |
} | |
] | |
}, | |
"RF00805": { | |
"AC": "RF00805", | |
"ID": "mir-351", | |
"DE": "microRNA mir-351", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-351" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00805" | |
} | |
] | |
}, | |
"RF00806": { | |
"AC": "RF00806", | |
"ID": "mir-350", | |
"DE": "microRNA mir-350", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-350" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00806" | |
} | |
] | |
}, | |
"RF00807": { | |
"AC": "RF00807", | |
"ID": "mir-314", | |
"DE": "microRNA mir-314", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-314" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00807" | |
} | |
] | |
}, | |
"RF00808": { | |
"AC": "RF00808", | |
"ID": "mir-86", | |
"DE": "microRNA mir-86", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-86" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00808" | |
} | |
] | |
}, | |
"RF00809": { | |
"AC": "RF00809", | |
"ID": "mir-241", | |
"DE": "microRNA mir-241", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-241" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00809" | |
} | |
] | |
}, | |
"RF00810": { | |
"AC": "RF00810", | |
"ID": "mir-85", | |
"DE": "microRNA mir-85", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-85" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00810" | |
} | |
] | |
}, | |
"RF00811": { | |
"AC": "RF00811", | |
"ID": "mir-84", | |
"DE": "microRNA mir-84", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-84" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00811" | |
} | |
] | |
}, | |
"RF00812": { | |
"AC": "RF00812", | |
"ID": "mir-83", | |
"DE": "microRNA mir-83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00812" | |
} | |
] | |
}, | |
"RF00813": { | |
"AC": "RF00813", | |
"ID": "mir-11", | |
"DE": "microRNA mir-11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00813" | |
} | |
] | |
}, | |
"RF00814": { | |
"AC": "RF00814", | |
"ID": "mir-316", | |
"DE": "microRNA mir-316", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-316" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00814" | |
} | |
] | |
}, | |
"RF00815": { | |
"AC": "RF00815", | |
"ID": "mir-244", | |
"DE": "microRNA mir-244", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-244" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00815" | |
} | |
] | |
}, | |
"RF00816": { | |
"AC": "RF00816", | |
"ID": "mir-245", | |
"DE": "microRNA mir-245", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-245" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00816" | |
} | |
] | |
}, | |
"RF00817": { | |
"AC": "RF00817", | |
"ID": "mir-80", | |
"DE": "microRNA mir-80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00817" | |
} | |
] | |
}, | |
"RF00818": { | |
"AC": "RF00818", | |
"ID": "mir-318", | |
"DE": "microRNA mir-318", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-318" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00818" | |
} | |
] | |
}, | |
"RF00819": { | |
"AC": "RF00819", | |
"ID": "mir-246", | |
"DE": "microRNA mir-246", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-246" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00819" | |
} | |
] | |
}, | |
"RF00820": { | |
"AC": "RF00820", | |
"ID": "mir-248", | |
"DE": "microRNA mir-248", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-248" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00820" | |
} | |
] | |
}, | |
"RF00821": { | |
"AC": "RF00821", | |
"ID": "mir-249", | |
"DE": "microRNA mir-249", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-249" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00821" | |
} | |
] | |
}, | |
"RF00822": { | |
"AC": "RF00822", | |
"ID": "mir-274", | |
"DE": "microRNA mir-274", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-274" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00822" | |
} | |
] | |
}, | |
"RF00823": { | |
"AC": "RF00823", | |
"ID": "lsy-6", | |
"DE": "microRNA lsy-6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA lsy-6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00823" | |
} | |
] | |
}, | |
"RF00824": { | |
"AC": "RF00824", | |
"ID": "mir-50", | |
"DE": "microRNA mir-50", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-50" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00824" | |
} | |
] | |
}, | |
"RF00825": { | |
"AC": "RF00825", | |
"ID": "mir-344", | |
"DE": "microRNA mir-344", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-344" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00825" | |
} | |
] | |
}, | |
"RF00826": { | |
"AC": "RF00826", | |
"ID": "mir-55", | |
"DE": "microRNA mir-55", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-55" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00826" | |
} | |
] | |
}, | |
"RF00827": { | |
"AC": "RF00827", | |
"ID": "mir-77", | |
"DE": "microRNA mir-77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00827" | |
} | |
] | |
}, | |
"RF00828": { | |
"AC": "RF00828", | |
"ID": "mir-75", | |
"DE": "microRNA mir-75", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-75" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00828" | |
} | |
] | |
}, | |
"RF00829": { | |
"AC": "RF00829", | |
"ID": "mir-149", | |
"DE": "microRNA mir-149", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-149" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00829" | |
} | |
] | |
}, | |
"RF00830": { | |
"AC": "RF00830", | |
"ID": "mir-74", | |
"DE": "microRNA mir-74", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-74" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00830" | |
} | |
] | |
}, | |
"RF00831": { | |
"AC": "RF00831", | |
"ID": "mir-73", | |
"DE": "microRNA mir-73", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-73" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00831" | |
} | |
] | |
}, | |
"RF00832": { | |
"AC": "RF00832", | |
"ID": "mir-71", | |
"DE": "microRNA mir-71", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-71" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00832" | |
} | |
] | |
}, | |
"RF00833": { | |
"AC": "RF00833", | |
"ID": "mir-70", | |
"DE": "microRNA mir-70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00833" | |
} | |
] | |
}, | |
"RF00834": { | |
"AC": "RF00834", | |
"ID": "mir-268", | |
"DE": "microRNA mir-268", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-268" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00834" | |
} | |
] | |
}, | |
"RF00835": { | |
"AC": "RF00835", | |
"ID": "mir-58", | |
"DE": "microRNA mir-58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00835" | |
} | |
] | |
}, | |
"RF00836": { | |
"AC": "RF00836", | |
"ID": "mir-250", | |
"DE": "microRNA mir-250", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-250" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00836" | |
} | |
] | |
}, | |
"RF00837": { | |
"AC": "RF00837", | |
"ID": "mir-251", | |
"DE": "microRNA mir-251", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-251" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00837" | |
} | |
] | |
}, | |
"RF00838": { | |
"AC": "RF00838", | |
"ID": "mir-252", | |
"DE": "microRNA mir-252", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-252" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00838" | |
} | |
] | |
}, | |
"RF00839": { | |
"AC": "RF00839", | |
"ID": "mir-452", | |
"DE": "microRNA mir-452", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-452" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00839" | |
} | |
] | |
}, | |
"RF00840": { | |
"AC": "RF00840", | |
"ID": "mir-374", | |
"DE": "microRNA mir-374", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-374" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00840" | |
} | |
] | |
}, | |
"RF00841": { | |
"AC": "RF00841", | |
"ID": "mir-384", | |
"DE": "microRNA mir-384", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-384" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00841" | |
} | |
] | |
}, | |
"RF00842": { | |
"AC": "RF00842", | |
"ID": "MIR403", | |
"DE": "microRNA MIR403", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR403" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00842" | |
} | |
] | |
}, | |
"RF00843": { | |
"AC": "RF00843", | |
"ID": "mir-228", | |
"DE": "microRNA mir-228", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-228" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00843" | |
} | |
] | |
}, | |
"RF00844": { | |
"AC": "RF00844", | |
"ID": "mir-67", | |
"DE": "microRNA mir-67", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-67" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00844" | |
} | |
] | |
}, | |
"RF00845": { | |
"AC": "RF00845", | |
"ID": "MIR158", | |
"DE": "microRNA MIR158", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR158" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00845" | |
} | |
] | |
}, | |
"RF00846": { | |
"AC": "RF00846", | |
"ID": "mir-64", | |
"DE": "microRNA mir-64", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-64" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00846" | |
} | |
] | |
}, | |
"RF00847": { | |
"AC": "RF00847", | |
"ID": "mir-62", | |
"DE": "microRNA mir-62", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-62" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00847" | |
} | |
] | |
}, | |
"RF00848": { | |
"AC": "RF00848", | |
"ID": "mir-61", | |
"DE": "microRNA mir-61", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-61" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00848" | |
} | |
] | |
}, | |
"RF00849": { | |
"AC": "RF00849", | |
"ID": "mir-60", | |
"DE": "microRNA mir-60", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-60" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00849" | |
} | |
] | |
}, | |
"RF00850": { | |
"AC": "RF00850", | |
"ID": "mir-259", | |
"DE": "microRNA mir-259", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-259" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00850" | |
} | |
] | |
}, | |
"RF00851": { | |
"AC": "RF00851", | |
"ID": "mir-230", | |
"DE": "microRNA mir-230", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-230" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00851" | |
} | |
] | |
}, | |
"RF00852": { | |
"AC": "RF00852", | |
"ID": "mir-231", | |
"DE": "microRNA mir-231", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-231" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00852" | |
} | |
] | |
}, | |
"RF00853": { | |
"AC": "RF00853", | |
"ID": "mir-304", | |
"DE": "microRNA mir-304", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-304" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00853" | |
} | |
] | |
}, | |
"RF00854": { | |
"AC": "RF00854", | |
"ID": "mir-5", | |
"DE": "microRNA mir-5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00854" | |
} | |
] | |
}, | |
"RF00855": { | |
"AC": "RF00855", | |
"ID": "mir-254", | |
"DE": "microRNA mir-254", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-254" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00855" | |
} | |
] | |
}, | |
"RF00856": { | |
"AC": "RF00856", | |
"ID": "mir-232", | |
"DE": "microRNA mir-232", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-232" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00856" | |
} | |
] | |
}, | |
"RF00857": { | |
"AC": "RF00857", | |
"ID": "mir-233", | |
"DE": "microRNA mir-233", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-233" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00857" | |
} | |
] | |
}, | |
"RF00858": { | |
"AC": "RF00858", | |
"ID": "mir-306", | |
"DE": "microRNA mir-306", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-306" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00858" | |
} | |
] | |
}, | |
"RF00859": { | |
"AC": "RF00859", | |
"ID": "mir-234", | |
"DE": "microRNA mir-234", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-234" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00859" | |
} | |
] | |
}, | |
"RF00861": { | |
"AC": "RF00861", | |
"ID": "mir-488", | |
"DE": "microRNA mir-488", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-488" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00861" | |
} | |
] | |
}, | |
"RF00862": { | |
"AC": "RF00862", | |
"ID": "mir-491", | |
"DE": "microRNA mir-491", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-491" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00862" | |
} | |
] | |
}, | |
"RF00863": { | |
"AC": "RF00863", | |
"ID": "mir-BART17", | |
"DE": "microRNA mir-BART17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00863" | |
} | |
] | |
}, | |
"RF00864": { | |
"AC": "RF00864", | |
"ID": "mir-BART20", | |
"DE": "microRNA mir-BART20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00864" | |
} | |
] | |
}, | |
"RF00865": { | |
"AC": "RF00865", | |
"ID": "MIR169_5", | |
"DE": "microRNA MIR169_5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR169_5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00865" | |
} | |
] | |
}, | |
"RF00866": { | |
"AC": "RF00866", | |
"ID": "mir-BART3", | |
"DE": "microRNA mir-BART3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00866" | |
} | |
] | |
}, | |
"RF00867": { | |
"AC": "RF00867", | |
"ID": "mir-BART5", | |
"DE": "microRNA mir-BART5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00867" | |
} | |
] | |
}, | |
"RF00868": { | |
"AC": "RF00868", | |
"ID": "mir-BART15", | |
"DE": "microRNA mir-BART15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00868" | |
} | |
] | |
}, | |
"RF00869": { | |
"AC": "RF00869", | |
"ID": "mir-BART7", | |
"DE": "microRNA mir-BART7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00869" | |
} | |
] | |
}, | |
"RF00870": { | |
"AC": "RF00870", | |
"ID": "mir-423", | |
"DE": "microRNA mir-423", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-423" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00870" | |
} | |
] | |
}, | |
"RF00871": { | |
"AC": "RF00871", | |
"ID": "mir-689", | |
"DE": "microRNA mir-689", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-689" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00871" | |
} | |
] | |
}, | |
"RF00872": { | |
"AC": "RF00872", | |
"ID": "mir-652", | |
"DE": "microRNA mir-652", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-652" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00872" | |
} | |
] | |
}, | |
"RF00873": { | |
"AC": "RF00873", | |
"ID": "mir-550", | |
"DE": "microRNA mir-550", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-550" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00873" | |
} | |
] | |
}, | |
"RF00874": { | |
"AC": "RF00874", | |
"ID": "mir-BART12", | |
"DE": "microRNA mir-BART12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-BART12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00874" | |
} | |
] | |
}, | |
"RF00875": { | |
"AC": "RF00875", | |
"ID": "mir-692", | |
"DE": "microRNA mir-692", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-692" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00875" | |
} | |
] | |
}, | |
"RF00876": { | |
"AC": "RF00876", | |
"ID": "mir-684", | |
"DE": "microRNA mir-684", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-684" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00876" | |
} | |
] | |
}, | |
"RF00877": { | |
"AC": "RF00877", | |
"ID": "mir-592", | |
"DE": "microRNA mir-592", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-592" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00877" | |
} | |
] | |
}, | |
"RF00878": { | |
"AC": "RF00878", | |
"ID": "mir-456", | |
"DE": "microRNA mir-456", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-456" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00878" | |
} | |
] | |
}, | |
"RF00879": { | |
"AC": "RF00879", | |
"ID": "mir-615", | |
"DE": "microRNA mir-615", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-615" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00879" | |
} | |
] | |
}, | |
"RF00882": { | |
"AC": "RF00882", | |
"ID": "MIR811", | |
"DE": "microRNA MIR811", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR811" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00882" | |
} | |
] | |
}, | |
"RF00883": { | |
"AC": "RF00883", | |
"ID": "MIR820", | |
"DE": "microRNA MIR820", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR820" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00883" | |
} | |
] | |
}, | |
"RF00884": { | |
"AC": "RF00884", | |
"ID": "MIR815", | |
"DE": "microRNA MIR815", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR815" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00884" | |
} | |
] | |
}, | |
"RF00885": { | |
"AC": "RF00885", | |
"ID": "MIR821", | |
"DE": "microRNA MIR821", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR821" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00885" | |
} | |
] | |
}, | |
"RF00886": { | |
"AC": "RF00886", | |
"ID": "MIR807", | |
"DE": "microRNA MIR807", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR807" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00886" | |
} | |
] | |
}, | |
"RF00887": { | |
"AC": "RF00887", | |
"ID": "mir-802", | |
"DE": "microRNA mir-802", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-802" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00887" | |
} | |
] | |
}, | |
"RF00888": { | |
"AC": "RF00888", | |
"ID": "mir-770", | |
"DE": "microRNA mir-770", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-770" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00888" | |
} | |
] | |
}, | |
"RF00890": { | |
"AC": "RF00890", | |
"ID": "mir-668", | |
"DE": "microRNA mir-668", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-668" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00890" | |
} | |
] | |
}, | |
"RF00891": { | |
"AC": "RF00891", | |
"ID": "mir-671", | |
"DE": "microRNA mir-671", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-671" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00891" | |
} | |
] | |
}, | |
"RF00892": { | |
"AC": "RF00892", | |
"ID": "mir-551", | |
"DE": "microRNA mir-551", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-551" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00892" | |
} | |
] | |
}, | |
"RF00893": { | |
"AC": "RF00893", | |
"ID": "MIR854", | |
"DE": "microRNA MIR854", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR854" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00893" | |
} | |
] | |
}, | |
"RF00894": { | |
"AC": "RF00894", | |
"ID": "mir-790", | |
"DE": "microRNA mir-790", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-790" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00894" | |
} | |
] | |
}, | |
"RF00895": { | |
"AC": "RF00895", | |
"ID": "mir-786", | |
"DE": "microRNA mir-786", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-786" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00895" | |
} | |
] | |
}, | |
"RF00896": { | |
"AC": "RF00896", | |
"ID": "mir-787", | |
"DE": "microRNA mir-787", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-787" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00896" | |
} | |
] | |
}, | |
"RF00897": { | |
"AC": "RF00897", | |
"ID": "mir-675", | |
"DE": "microRNA mir-675", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-675" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00897" | |
} | |
] | |
}, | |
"RF00898": { | |
"AC": "RF00898", | |
"ID": "mir-242", | |
"DE": "microRNA mir-242", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-242" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00898" | |
} | |
] | |
}, | |
"RF00899": { | |
"AC": "RF00899", | |
"ID": "mir-235", | |
"DE": "microRNA mir-235", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-235" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00899" | |
} | |
] | |
}, | |
"RF00900": { | |
"AC": "RF00900", | |
"ID": "mir-255", | |
"DE": "microRNA mir-255", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-255" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00900" | |
} | |
] | |
}, | |
"RF00901": { | |
"AC": "RF00901", | |
"ID": "MIR845_1", | |
"DE": "microRNA MIR845_1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR845_1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00901" | |
} | |
] | |
}, | |
"RF00902": { | |
"AC": "RF00902", | |
"ID": "mir-791", | |
"DE": "microRNA mir-791", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-791" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00902" | |
} | |
] | |
}, | |
"RF00903": { | |
"AC": "RF00903", | |
"ID": "mir-359", | |
"DE": "microRNA mir-359", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-359" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00903" | |
} | |
] | |
}, | |
"RF00904": { | |
"AC": "RF00904", | |
"ID": "mir-392", | |
"DE": "microRNA mir-392", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-392" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00904" | |
} | |
] | |
}, | |
"RF00905": { | |
"AC": "RF00905", | |
"ID": "mir-789", | |
"DE": "microRNA mir-789", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-789" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00905" | |
} | |
] | |
}, | |
"RF00906": { | |
"AC": "RF00906", | |
"ID": "MIR1122", | |
"DE": "microRNA MIR1122", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1122" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00906" | |
} | |
] | |
}, | |
"RF00907": { | |
"AC": "RF00907", | |
"ID": "mir-941", | |
"DE": "microRNA mir-941", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-941" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00907" | |
} | |
] | |
}, | |
"RF00908": { | |
"AC": "RF00908", | |
"ID": "MIR529", | |
"DE": "microRNA MIR529", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR529" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00908" | |
} | |
] | |
}, | |
"RF00909": { | |
"AC": "RF00909", | |
"ID": "mir-883", | |
"DE": "microRNA mir-883", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-883" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00909" | |
} | |
] | |
}, | |
"RF00910": { | |
"AC": "RF00910", | |
"ID": "mir-873", | |
"DE": "microRNA mir-873", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-873" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00910" | |
} | |
] | |
}, | |
"RF00911": { | |
"AC": "RF00911", | |
"ID": "mir-672", | |
"DE": "microRNA mir-672", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-672" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00911" | |
} | |
] | |
}, | |
"RF00912": { | |
"AC": "RF00912", | |
"ID": "mir-877", | |
"DE": "microRNA mir-877", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-877" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00912" | |
} | |
] | |
}, | |
"RF00914": { | |
"AC": "RF00914", | |
"ID": "mir-674", | |
"DE": "microRNA mir-674", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-674" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00914" | |
} | |
] | |
}, | |
"RF00915": { | |
"AC": "RF00915", | |
"ID": "mir-760", | |
"DE": "microRNA mir-760", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-760" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00915" | |
} | |
] | |
}, | |
"RF00917": { | |
"AC": "RF00917", | |
"ID": "mir-708", | |
"DE": "microRNA mir-708", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-708" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00917" | |
} | |
] | |
}, | |
"RF00918": { | |
"AC": "RF00918", | |
"ID": "mir-872", | |
"DE": "microRNA mir-872", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-872" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00918" | |
} | |
] | |
}, | |
"RF00919": { | |
"AC": "RF00919", | |
"ID": "mir-874", | |
"DE": "microRNA mir-874", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-874" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00919" | |
} | |
] | |
}, | |
"RF00920": { | |
"AC": "RF00920", | |
"ID": "MIR444", | |
"DE": "microRNA MIR444", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR444" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00920" | |
} | |
] | |
}, | |
"RF00921": { | |
"AC": "RF00921", | |
"ID": "mir-665", | |
"DE": "microRNA mir-665", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-665" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00921" | |
} | |
] | |
}, | |
"RF00922": { | |
"AC": "RF00922", | |
"ID": "mir-673", | |
"DE": "microRNA mir-673", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-673" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00922" | |
} | |
] | |
}, | |
"RF00925": { | |
"AC": "RF00925", | |
"ID": "MIR1027", | |
"DE": "microRNA MIR1027", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1027" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00925" | |
} | |
] | |
}, | |
"RF00926": { | |
"AC": "RF00926", | |
"ID": "MIR1151", | |
"DE": "microRNA MIR1151", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1151" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00926" | |
} | |
] | |
}, | |
"RF00927": { | |
"AC": "RF00927", | |
"ID": "mir-582", | |
"DE": "microRNA mir-582", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-582" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00927" | |
} | |
] | |
}, | |
"RF00928": { | |
"AC": "RF00928", | |
"ID": "mir-590", | |
"DE": "microRNA mir-590", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-590" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00928" | |
} | |
] | |
}, | |
"RF00929": { | |
"AC": "RF00929", | |
"ID": "mir-574", | |
"DE": "microRNA mir-574", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-574" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00929" | |
} | |
] | |
}, | |
"RF00931": { | |
"AC": "RF00931", | |
"ID": "mir-879", | |
"DE": "microRNA mir-879", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-879" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00931" | |
} | |
] | |
}, | |
"RF00932": { | |
"AC": "RF00932", | |
"ID": "mir-471", | |
"DE": "microRNA mir-471", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-471" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00932" | |
} | |
] | |
}, | |
"RF00933": { | |
"AC": "RF00933", | |
"ID": "mir-875", | |
"DE": "microRNA mir-875", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-875" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00933" | |
} | |
] | |
}, | |
"RF00934": { | |
"AC": "RF00934", | |
"ID": "mir-463", | |
"DE": "microRNA mir-463", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-463" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00934" | |
} | |
] | |
}, | |
"RF00935": { | |
"AC": "RF00935", | |
"ID": "mir-876", | |
"DE": "microRNA mir-876", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-876" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00935" | |
} | |
] | |
}, | |
"RF00936": { | |
"AC": "RF00936", | |
"ID": "mir-744", | |
"DE": "microRNA mir-744", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-744" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00936" | |
} | |
] | |
}, | |
"RF00937": { | |
"AC": "RF00937", | |
"ID": "mir-653", | |
"DE": "microRNA mir-653", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-653" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00937" | |
} | |
] | |
}, | |
"RF00939": { | |
"AC": "RF00939", | |
"ID": "mir-504", | |
"DE": "microRNA mir-504", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-504" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00939" | |
} | |
] | |
}, | |
"RF00940": { | |
"AC": "RF00940", | |
"ID": "mir-327", | |
"DE": "microRNA mir-327", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-327" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00940" | |
} | |
] | |
}, | |
"RF00941": { | |
"AC": "RF00941", | |
"ID": "mir-434", | |
"DE": "microRNA mir-434", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-434" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00941" | |
} | |
] | |
}, | |
"RF00942": { | |
"AC": "RF00942", | |
"ID": "mir-1224", | |
"DE": "microRNA mir-1224", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1224" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00942" | |
} | |
] | |
}, | |
"RF00943": { | |
"AC": "RF00943", | |
"ID": "MIR824", | |
"DE": "microRNA MIR824", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR824" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00943" | |
} | |
] | |
}, | |
"RF00945": { | |
"AC": "RF00945", | |
"ID": "mir-1226", | |
"DE": "microRNA mir-1226", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1226" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00945" | |
} | |
] | |
}, | |
"RF00946": { | |
"AC": "RF00946", | |
"ID": "mir-1225", | |
"DE": "microRNA mir-1225", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1225" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00946" | |
} | |
] | |
}, | |
"RF00947": { | |
"AC": "RF00947", | |
"ID": "mir-929", | |
"DE": "microRNA mir-929", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-929" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00947" | |
} | |
] | |
}, | |
"RF00948": { | |
"AC": "RF00948", | |
"ID": "mir-996", | |
"DE": "microRNA mir-996", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-996" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00948" | |
} | |
] | |
}, | |
"RF00949": { | |
"AC": "RF00949", | |
"ID": "mir-983", | |
"DE": "microRNA mir-983", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-983" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00949" | |
} | |
] | |
}, | |
"RF00950": { | |
"AC": "RF00950", | |
"ID": "mir-927", | |
"DE": "microRNA mir-927", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-927" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00950" | |
} | |
] | |
}, | |
"RF00951": { | |
"AC": "RF00951", | |
"ID": "mir-1302", | |
"DE": "microRNA mir-1302", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1302" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00951" | |
} | |
] | |
}, | |
"RF00952": { | |
"AC": "RF00952", | |
"ID": "mir-650", | |
"DE": "microRNA mir-650", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-650" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00952" | |
} | |
] | |
}, | |
"RF00953": { | |
"AC": "RF00953", | |
"ID": "mir-1497", | |
"DE": "microRNA mir-1497", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1497" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00953" | |
} | |
] | |
}, | |
"RF00954": { | |
"AC": "RF00954", | |
"ID": "MIR1446", | |
"DE": "microRNA MIR1446", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1446" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00954" | |
} | |
] | |
}, | |
"RF00955": { | |
"AC": "RF00955", | |
"ID": "mir-1829", | |
"DE": "microRNA mir-1829", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1829" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00955" | |
} | |
] | |
}, | |
"RF00956": { | |
"AC": "RF00956", | |
"ID": "MIR1444", | |
"DE": "microRNA MIR1444", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1444" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00956" | |
} | |
] | |
}, | |
"RF00957": { | |
"AC": "RF00957", | |
"ID": "mir-663", | |
"DE": "microRNA mir-663", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-663" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00957" | |
} | |
] | |
}, | |
"RF00958": { | |
"AC": "RF00958", | |
"ID": "mir-498", | |
"DE": "microRNA mir-498", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-498" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00958" | |
} | |
] | |
}, | |
"RF00959": { | |
"AC": "RF00959", | |
"ID": "mir-612", | |
"DE": "microRNA mir-612", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-612" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00959" | |
} | |
] | |
}, | |
"RF00960": { | |
"AC": "RF00960", | |
"ID": "mir-661", | |
"DE": "microRNA mir-661", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-661" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00960" | |
} | |
] | |
}, | |
"RF00961": { | |
"AC": "RF00961", | |
"ID": "mir-581", | |
"DE": "microRNA mir-581", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-581" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00961" | |
} | |
] | |
}, | |
"RF00962": { | |
"AC": "RF00962", | |
"ID": "mir-586", | |
"DE": "microRNA mir-586", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-586" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00962" | |
} | |
] | |
}, | |
"RF00963": { | |
"AC": "RF00963", | |
"ID": "mir-642", | |
"DE": "microRNA mir-642", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-642" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00963" | |
} | |
] | |
}, | |
"RF00964": { | |
"AC": "RF00964", | |
"ID": "mir-938", | |
"DE": "microRNA mir-938", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-938" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00964" | |
} | |
] | |
}, | |
"RF00965": { | |
"AC": "RF00965", | |
"ID": "mir-549", | |
"DE": "microRNA mir-549", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-549" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00965" | |
} | |
] | |
}, | |
"RF00966": { | |
"AC": "RF00966", | |
"ID": "mir-676", | |
"DE": "microRNA mir-676", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-676" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00966" | |
} | |
] | |
}, | |
"RF00967": { | |
"AC": "RF00967", | |
"ID": "mir-281", | |
"DE": "microRNA mir-281", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-281" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00967" | |
} | |
] | |
}, | |
"RF00968": { | |
"AC": "RF00968", | |
"ID": "mir-626", | |
"DE": "microRNA mir-626", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-626" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00968" | |
} | |
] | |
}, | |
"RF00969": { | |
"AC": "RF00969", | |
"ID": "mir-556", | |
"DE": "microRNA mir-556", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-556" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00969" | |
} | |
] | |
}, | |
"RF00970": { | |
"AC": "RF00970", | |
"ID": "mir-648", | |
"DE": "microRNA mir-648", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-648" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00970" | |
} | |
] | |
}, | |
"RF00971": { | |
"AC": "RF00971", | |
"ID": "mir-578", | |
"DE": "microRNA mir-578", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-578" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00971" | |
} | |
] | |
}, | |
"RF00972": { | |
"AC": "RF00972", | |
"ID": "mir-651", | |
"DE": "microRNA mir-651", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-651" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00972" | |
} | |
] | |
}, | |
"RF00973": { | |
"AC": "RF00973", | |
"ID": "mir-597", | |
"DE": "microRNA mir-597", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-597" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00973" | |
} | |
] | |
}, | |
"RF00974": { | |
"AC": "RF00974", | |
"ID": "mir-607", | |
"DE": "microRNA mir-607", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-607" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00974" | |
} | |
] | |
}, | |
"RF00975": { | |
"AC": "RF00975", | |
"ID": "MIR845_2", | |
"DE": "microRNA MIR845_2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR845_2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00975" | |
} | |
] | |
}, | |
"RF00976": { | |
"AC": "RF00976", | |
"ID": "mir-583", | |
"DE": "microRNA mir-583", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-583" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00976" | |
} | |
] | |
}, | |
"RF00977": { | |
"AC": "RF00977", | |
"ID": "mir-600", | |
"DE": "microRNA mir-600", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-600" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00977" | |
} | |
] | |
}, | |
"RF00978": { | |
"AC": "RF00978", | |
"ID": "mir-638", | |
"DE": "microRNA mir-638", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-638" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00978" | |
} | |
] | |
}, | |
"RF00979": { | |
"AC": "RF00979", | |
"ID": "mir-553", | |
"DE": "microRNA mir-553", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-553" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00979" | |
} | |
] | |
}, | |
"RF00980": { | |
"AC": "RF00980", | |
"ID": "mir-643", | |
"DE": "microRNA mir-643", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-643" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00980" | |
} | |
] | |
}, | |
"RF00981": { | |
"AC": "RF00981", | |
"ID": "mir-939", | |
"DE": "microRNA mir-939", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-939" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00981" | |
} | |
] | |
}, | |
"RF00983": { | |
"AC": "RF00983", | |
"ID": "mir-662", | |
"DE": "microRNA mir-662", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-662" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00983" | |
} | |
] | |
}, | |
"RF00984": { | |
"AC": "RF00984", | |
"ID": "mir-576", | |
"DE": "microRNA mir-576", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-576" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00984" | |
} | |
] | |
}, | |
"RF00985": { | |
"AC": "RF00985", | |
"ID": "mir-640", | |
"DE": "microRNA mir-640", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-640" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00985" | |
} | |
] | |
}, | |
"RF00986": { | |
"AC": "RF00986", | |
"ID": "mir-920", | |
"DE": "microRNA mir-920", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-920" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00986" | |
} | |
] | |
}, | |
"RF00987": { | |
"AC": "RF00987", | |
"ID": "mir-589", | |
"DE": "microRNA mir-589", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-589" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00987" | |
} | |
] | |
}, | |
"RF00988": { | |
"AC": "RF00988", | |
"ID": "mir-657", | |
"DE": "microRNA mir-657", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-657" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00988" | |
} | |
] | |
}, | |
"RF00989": { | |
"AC": "RF00989", | |
"ID": "mir-492", | |
"DE": "microRNA mir-492", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-492" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00989" | |
} | |
] | |
}, | |
"RF00990": { | |
"AC": "RF00990", | |
"ID": "mir-552", | |
"DE": "microRNA mir-552", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-552" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00990" | |
} | |
] | |
}, | |
"RF00991": { | |
"AC": "RF00991", | |
"ID": "mir-599", | |
"DE": "microRNA mir-599", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-599" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00991" | |
} | |
] | |
}, | |
"RF00992": { | |
"AC": "RF00992", | |
"ID": "mir-593", | |
"DE": "microRNA mir-593", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-593" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00992" | |
} | |
] | |
}, | |
"RF00993": { | |
"AC": "RF00993", | |
"ID": "mir-1473", | |
"DE": "microRNA mir-1473", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1473" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00993" | |
} | |
] | |
}, | |
"RF00994": { | |
"AC": "RF00994", | |
"ID": "mir-1255", | |
"DE": "microRNA mir-1255", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1255" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00994" | |
} | |
] | |
}, | |
"RF00995": { | |
"AC": "RF00995", | |
"ID": "mir-616", | |
"DE": "microRNA mir-616", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-616" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00995" | |
} | |
] | |
}, | |
"RF00996": { | |
"AC": "RF00996", | |
"ID": "mir-631", | |
"DE": "microRNA mir-631", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-631" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00996" | |
} | |
] | |
}, | |
"RF00997": { | |
"AC": "RF00997", | |
"ID": "mir-942", | |
"DE": "microRNA mir-942", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-942" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00997" | |
} | |
] | |
}, | |
"RF00998": { | |
"AC": "RF00998", | |
"ID": "mir-562", | |
"DE": "microRNA mir-562", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-562" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00998" | |
} | |
] | |
}, | |
"RF00999": { | |
"AC": "RF00999", | |
"ID": "mir-924", | |
"DE": "microRNA mir-924", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-924" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF00999" | |
} | |
] | |
}, | |
"RF01000": { | |
"AC": "RF01000", | |
"ID": "mir-580", | |
"DE": "microRNA mir-580", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-580" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01000" | |
} | |
] | |
}, | |
"RF01001": { | |
"AC": "RF01001", | |
"ID": "mir-609", | |
"DE": "microRNA mir-609", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-609" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01001" | |
} | |
] | |
}, | |
"RF01002": { | |
"AC": "RF01002", | |
"ID": "mir-936", | |
"DE": "microRNA mir-936", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-936" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01002" | |
} | |
] | |
}, | |
"RF01003": { | |
"AC": "RF01003", | |
"ID": "mir-563", | |
"DE": "microRNA mir-563", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-563" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01003" | |
} | |
] | |
}, | |
"RF01004": { | |
"AC": "RF01004", | |
"ID": "mir-557", | |
"DE": "microRNA mir-557", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-557" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01004" | |
} | |
] | |
}, | |
"RF01005": { | |
"AC": "RF01005", | |
"ID": "MIR530", | |
"DE": "microRNA MIR530", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR530" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01005" | |
} | |
] | |
}, | |
"RF01006": { | |
"AC": "RF01006", | |
"ID": "mir-601", | |
"DE": "microRNA mir-601", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-601" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01006" | |
} | |
] | |
}, | |
"RF01007": { | |
"AC": "RF01007", | |
"ID": "mir-624", | |
"DE": "microRNA mir-624", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-624" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01007" | |
} | |
] | |
}, | |
"RF01008": { | |
"AC": "RF01008", | |
"ID": "mir-636", | |
"DE": "microRNA mir-636", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-636" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01008" | |
} | |
] | |
}, | |
"RF01009": { | |
"AC": "RF01009", | |
"ID": "mir-M7", | |
"DE": "microRNA mir-M7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-M7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01009" | |
} | |
] | |
}, | |
"RF01010": { | |
"AC": "RF01010", | |
"ID": "mir-632", | |
"DE": "microRNA mir-632", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-632" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01010" | |
} | |
] | |
}, | |
"RF01011": { | |
"AC": "RF01011", | |
"ID": "mir-605", | |
"DE": "microRNA mir-605", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-605" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01011" | |
} | |
] | |
}, | |
"RF01012": { | |
"AC": "RF01012", | |
"ID": "mir-628", | |
"DE": "microRNA mir-628", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-628" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01012" | |
} | |
] | |
}, | |
"RF01013": { | |
"AC": "RF01013", | |
"ID": "mir-577", | |
"DE": "microRNA mir-577", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-577" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01013" | |
} | |
] | |
}, | |
"RF01014": { | |
"AC": "RF01014", | |
"ID": "mir-1306", | |
"DE": "microRNA mir-1306", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1306" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01014" | |
} | |
] | |
}, | |
"RF01015": { | |
"AC": "RF01015", | |
"ID": "mir-885", | |
"DE": "microRNA mir-885", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-885" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01015" | |
} | |
] | |
}, | |
"RF01016": { | |
"AC": "RF01016", | |
"ID": "mir-584", | |
"DE": "microRNA mir-584", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-584" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01016" | |
} | |
] | |
}, | |
"RF01018": { | |
"AC": "RF01018", | |
"ID": "mir-569", | |
"DE": "microRNA mir-569", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-569" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01018" | |
} | |
] | |
}, | |
"RF01019": { | |
"AC": "RF01019", | |
"ID": "mir-922", | |
"DE": "microRNA mir-922", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-922" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01019" | |
} | |
] | |
}, | |
"RF01020": { | |
"AC": "RF01020", | |
"ID": "mir-572", | |
"DE": "microRNA mir-572", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-572" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01020" | |
} | |
] | |
}, | |
"RF01021": { | |
"AC": "RF01021", | |
"ID": "mir-558", | |
"DE": "microRNA mir-558", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-558" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01021" | |
} | |
] | |
}, | |
"RF01022": { | |
"AC": "RF01022", | |
"ID": "mir-611", | |
"DE": "microRNA mir-611", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-611" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01022" | |
} | |
] | |
}, | |
"RF01023": { | |
"AC": "RF01023", | |
"ID": "mir-940", | |
"DE": "microRNA mir-940", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-940" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01023" | |
} | |
] | |
}, | |
"RF01024": { | |
"AC": "RF01024", | |
"ID": "mir-944", | |
"DE": "microRNA mir-944", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-944" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01024" | |
} | |
] | |
}, | |
"RF01025": { | |
"AC": "RF01025", | |
"ID": "mir-934", | |
"DE": "microRNA mir-934", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-934" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01025" | |
} | |
] | |
}, | |
"RF01026": { | |
"AC": "RF01026", | |
"ID": "MIR828", | |
"DE": "microRNA MIR828", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR828" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01026" | |
} | |
] | |
}, | |
"RF01027": { | |
"AC": "RF01027", | |
"ID": "mir-765", | |
"DE": "microRNA mir-765", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-765" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01027" | |
} | |
] | |
}, | |
"RF01028": { | |
"AC": "RF01028", | |
"ID": "mir-633", | |
"DE": "microRNA mir-633", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-633" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01028" | |
} | |
] | |
}, | |
"RF01029": { | |
"AC": "RF01029", | |
"ID": "mir-649", | |
"DE": "microRNA mir-649", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-649" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01029" | |
} | |
] | |
}, | |
"RF01030": { | |
"AC": "RF01030", | |
"ID": "mir-422", | |
"DE": "microRNA mir-422", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-422" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01030" | |
} | |
] | |
}, | |
"RF01031": { | |
"AC": "RF01031", | |
"ID": "mir-639", | |
"DE": "microRNA mir-639", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-639" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01031" | |
} | |
] | |
}, | |
"RF01032": { | |
"AC": "RF01032", | |
"ID": "mir-554", | |
"DE": "microRNA mir-554", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-554" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01032" | |
} | |
] | |
}, | |
"RF01033": { | |
"AC": "RF01033", | |
"ID": "mir-767", | |
"DE": "microRNA mir-767", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-767" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01033" | |
} | |
] | |
}, | |
"RF01034": { | |
"AC": "RF01034", | |
"ID": "mir-618", | |
"DE": "microRNA mir-618", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-618" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01034" | |
} | |
] | |
}, | |
"RF01035": { | |
"AC": "RF01035", | |
"ID": "mir-887", | |
"DE": "microRNA mir-887", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-887" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01035" | |
} | |
] | |
}, | |
"RF01036": { | |
"AC": "RF01036", | |
"ID": "mir-567", | |
"DE": "microRNA mir-567", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-567" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01036" | |
} | |
] | |
}, | |
"RF01037": { | |
"AC": "RF01037", | |
"ID": "mir-644", | |
"DE": "microRNA mir-644", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-644" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01037" | |
} | |
] | |
}, | |
"RF01038": { | |
"AC": "RF01038", | |
"ID": "mir-1307", | |
"DE": "microRNA mir-1307", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1307" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01038" | |
} | |
] | |
}, | |
"RF01039": { | |
"AC": "RF01039", | |
"ID": "mir-937", | |
"DE": "microRNA mir-937", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-937" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01039" | |
} | |
] | |
}, | |
"RF01040": { | |
"AC": "RF01040", | |
"ID": "mir-573", | |
"DE": "microRNA mir-573", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-573" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01040" | |
} | |
] | |
}, | |
"RF01041": { | |
"AC": "RF01041", | |
"ID": "mir-604", | |
"DE": "microRNA mir-604", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-604" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01041" | |
} | |
] | |
}, | |
"RF01042": { | |
"AC": "RF01042", | |
"ID": "mir-891", | |
"DE": "microRNA mir-891", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-891" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01042" | |
} | |
] | |
}, | |
"RF01043": { | |
"AC": "RF01043", | |
"ID": "MIR1023", | |
"DE": "microRNA MIR1023", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1023" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01043" | |
} | |
] | |
}, | |
"RF01044": { | |
"AC": "RF01044", | |
"ID": "mir-345", | |
"DE": "microRNA mir-345", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-345" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01044" | |
} | |
] | |
}, | |
"RF01045": { | |
"AC": "RF01045", | |
"ID": "mir-544", | |
"DE": "microRNA mir-544", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-544" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01045" | |
} | |
] | |
}, | |
"RF01046": { | |
"AC": "RF01046", | |
"ID": "WLE3", | |
"DE": "Wingless localisation element 3 (WLE3)", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01046" | |
} | |
] | |
}, | |
"RF01047": { | |
"AC": "RF01047", | |
"ID": "HBV_epsilon", | |
"DE": "HBV RNA encapsidation signal epsilon", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01047" | |
} | |
] | |
}, | |
"RF01050": { | |
"AC": "RF01050", | |
"ID": "Sacc_telomerase", | |
"DE": "Saccharomyces telomerase", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "telomerase_RNA" | |
}, | |
{ | |
"product": "Saccharomyces telomerase" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01050" | |
} | |
] | |
}, | |
"RF01051": { | |
"AC": "RF01051", | |
"ID": "c-di-GMP-I", | |
"DE": "Cyclic di-GMP-I riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01051" | |
} | |
] | |
}, | |
"RF01052": { | |
"AC": "RF01052", | |
"ID": "Arthropod_7SK", | |
"DE": "Arthropod 7SK RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Arthropod 7SK RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01052" | |
} | |
] | |
}, | |
"RF01053": { | |
"AC": "RF01053", | |
"ID": "Deinococcus_Y_RNA", | |
"DE": "Deinococcus radiodurans Y RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Deinococcus radiodurans Y RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01053" | |
} | |
] | |
}, | |
"RF01054": { | |
"AC": "RF01054", | |
"ID": "preQ1-II", | |
"DE": "preQ1-II (pre queuosine) riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01054" | |
} | |
] | |
}, | |
"RF01055": { | |
"AC": "RF01055", | |
"ID": "MOCO_RNA_motif", | |
"DE": "Moco (molybdenum cofactor) riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01055" | |
} | |
] | |
}, | |
"RF01056": { | |
"AC": "RF01056", | |
"ID": "Mg_sensor", | |
"DE": "Magnesium Sensor", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01056" | |
} | |
] | |
}, | |
"RF01057": { | |
"AC": "RF01057", | |
"ID": "SAH_riboswitch", | |
"DE": "S-adenosyl-L-homocysteine riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01057" | |
} | |
] | |
}, | |
"RF01059": { | |
"AC": "RF01059", | |
"ID": "mir-598", | |
"DE": "microRNA mir-598", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-598" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01059" | |
} | |
] | |
}, | |
"RF01061": { | |
"AC": "RF01061", | |
"ID": "mir-548", | |
"DE": "microRNA mir-548", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-548" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01061" | |
} | |
] | |
}, | |
"RF01064": { | |
"AC": "RF01064", | |
"ID": "mir-253", | |
"DE": "microRNA mir-253", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-253" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01064" | |
} | |
] | |
}, | |
"RF01065": { | |
"AC": "RF01065", | |
"ID": "23S-methyl", | |
"DE": "23S methyl RNA motif", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01065" | |
} | |
] | |
}, | |
"RF01066": { | |
"AC": "RF01066", | |
"ID": "6C", | |
"DE": "6C RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01066" | |
} | |
] | |
}, | |
"RF01067": { | |
"AC": "RF01067", | |
"ID": "ATPC", | |
"DE": "ATPC RNA motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ATPC RNA motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01067" | |
} | |
] | |
}, | |
"RF01068": { | |
"AC": "RF01068", | |
"ID": "mini-ykkC", | |
"DE": "mini-ykkC RNA motif", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01068" | |
} | |
] | |
}, | |
"RF01069": { | |
"AC": "RF01069", | |
"ID": "purD", | |
"DE": "purD RNA motif", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01069" | |
} | |
] | |
}, | |
"RF01070": { | |
"AC": "RF01070", | |
"ID": "sucA", | |
"DE": "SucA RNA motif", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01070" | |
} | |
] | |
}, | |
"RF01071": { | |
"AC": "RF01071", | |
"ID": "OLE", | |
"DE": "Ornate Large Extremophilic RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Ornate Large Extremophilic RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01071" | |
} | |
] | |
}, | |
"RF01072": { | |
"AC": "RF01072", | |
"ID": "TMV_UPD-PK3", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01072" | |
} | |
] | |
}, | |
"RF01073": { | |
"AC": "RF01073", | |
"ID": "GP_knot1", | |
"DE": "Gag/pol translational readthrough site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01073" | |
} | |
] | |
}, | |
"RF01074": { | |
"AC": "RF01074", | |
"ID": "RF_site1", | |
"DE": "Putative RNA-dependent RNA polymerase ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01074" | |
} | |
] | |
}, | |
"RF01075": { | |
"AC": "RF01075", | |
"ID": "TLS-PK1", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01075" | |
} | |
] | |
}, | |
"RF01076": { | |
"AC": "RF01076", | |
"ID": "RF_site2", | |
"DE": "Polymerase ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01076" | |
} | |
] | |
}, | |
"RF01077": { | |
"AC": "RF01077", | |
"ID": "TLS-PK2", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01077" | |
} | |
] | |
}, | |
"RF01078": { | |
"AC": "RF01078", | |
"ID": "PK-PYVV", | |
"DE": "3'-terminal pseudoknot in PYVV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01078" | |
} | |
] | |
}, | |
"RF01079": { | |
"AC": "RF01079", | |
"ID": "RF_site3", | |
"DE": "Putative RNA-dependent RNA polymerase ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01079" | |
} | |
] | |
}, | |
"RF01080": { | |
"AC": "RF01080", | |
"ID": "UPD-PKib", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01080" | |
} | |
] | |
}, | |
"RF01081": { | |
"AC": "RF01081", | |
"ID": "SBWMV1_UPD-PKe", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01081" | |
} | |
] | |
}, | |
"RF01082": { | |
"AC": "RF01082", | |
"ID": "SBWMV1_UPD-PKh", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01082" | |
} | |
] | |
}, | |
"RF01083": { | |
"AC": "RF01083", | |
"ID": "UPD-PK2", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01083" | |
} | |
] | |
}, | |
"RF01084": { | |
"AC": "RF01084", | |
"ID": "TLS-PK3", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01084" | |
} | |
] | |
}, | |
"RF01085": { | |
"AC": "RF01085", | |
"ID": "TLS-PK4", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01085" | |
} | |
] | |
}, | |
"RF01087": { | |
"AC": "RF01087", | |
"ID": "PK-repZ", | |
"DE": "Pseudoknot of the regulatory region of the repZ gene", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01087" | |
} | |
] | |
}, | |
"RF01088": { | |
"AC": "RF01088", | |
"ID": "TLS-PK5", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01088" | |
} | |
] | |
}, | |
"RF01089": { | |
"AC": "RF01089", | |
"ID": "PK-repBA", | |
"DE": "Pseudoknot of the regulatory region of the repBA gene", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01089" | |
} | |
] | |
}, | |
"RF01090": { | |
"AC": "RF01090", | |
"ID": "RF_site4", | |
"DE": "Edr gene ribosomal frameshift signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01090" | |
} | |
] | |
}, | |
"RF01091": { | |
"AC": "RF01091", | |
"ID": "PK-SPCSV", | |
"DE": "3'-terminal pseudoknot in SPCSV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01091" | |
} | |
] | |
}, | |
"RF01092": { | |
"AC": "RF01092", | |
"ID": "GP_knot2", | |
"DE": "Gag/pol translational readthrough site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01092" | |
} | |
] | |
}, | |
"RF01093": { | |
"AC": "RF01093", | |
"ID": "RF_site5", | |
"DE": "Ma3 gene ribosomal frameshift signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01093" | |
} | |
] | |
}, | |
"RF01094": { | |
"AC": "RF01094", | |
"ID": "RF_site6", | |
"DE": "Polymerase ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01094" | |
} | |
] | |
}, | |
"RF01095": { | |
"AC": "RF01095", | |
"ID": "PK-CuYV_BPYV", | |
"DE": "3'-terminal pseudoknot of CuYV/BPYV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01095" | |
} | |
] | |
}, | |
"RF01096": { | |
"AC": "RF01096", | |
"ID": "PK-HAV", | |
"DE": "HepA virus 3'-terminal pseudoknot", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01096" | |
} | |
] | |
}, | |
"RF01097": { | |
"AC": "RF01097", | |
"ID": "RF_site8", | |
"DE": "Gag/pro ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01097" | |
} | |
] | |
}, | |
"RF01098": { | |
"AC": "RF01098", | |
"ID": "RF_site9", | |
"DE": "Gag/pro ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01098" | |
} | |
] | |
}, | |
"RF01099": { | |
"AC": "RF01099", | |
"ID": "PK-IAV", | |
"DE": "Pseudoknot of influenza A virus gene", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01099" | |
} | |
] | |
}, | |
"RF01100": { | |
"AC": "RF01100", | |
"ID": "PK-BYV", | |
"DE": "3'-terminal pseudoknot in BYV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01100" | |
} | |
] | |
}, | |
"RF01101": { | |
"AC": "RF01101", | |
"ID": "TLS-PK6", | |
"DE": "Pseudoknot of tRNA-like structure", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01101" | |
} | |
] | |
}, | |
"RF01102": { | |
"AC": "RF01102", | |
"ID": "PK1-TEV_CVMV", | |
"DE": "5'-leader pseudoknot of TEV/CVMV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01102" | |
} | |
] | |
}, | |
"RF01103": { | |
"AC": "RF01103", | |
"ID": "UPD-PKc", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01103" | |
} | |
] | |
}, | |
"RF01104": { | |
"AC": "RF01104", | |
"ID": "SBWMV2_UPD-PKb", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01104" | |
} | |
] | |
}, | |
"RF01105": { | |
"AC": "RF01105", | |
"ID": "SBWMV2_UPD-PKl", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01105" | |
} | |
] | |
}, | |
"RF01106": { | |
"AC": "RF01106", | |
"ID": "SBWMV1_UPD-PKb", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01106" | |
} | |
] | |
}, | |
"RF01107": { | |
"AC": "RF01107", | |
"ID": "SBRMV1_UPD-PKf", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01107" | |
} | |
] | |
}, | |
"RF01108": { | |
"AC": "RF01108", | |
"ID": "BMV3_UPD-PK1", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01108" | |
} | |
] | |
}, | |
"RF01109": { | |
"AC": "RF01109", | |
"ID": "SBRMV1_UPD-PKd", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01109" | |
} | |
] | |
}, | |
"RF01111": { | |
"AC": "RF01111", | |
"ID": "SBWMV2_UPD-PKk", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01111" | |
} | |
] | |
}, | |
"RF01113": { | |
"AC": "RF01113", | |
"ID": "BMV3_UPD-PK3", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01113" | |
} | |
] | |
}, | |
"RF01114": { | |
"AC": "RF01114", | |
"ID": "TMV_UPD-PK1", | |
"DE": "Pseudoknot of upstream pseudoknot domain (UPD) of the 3'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01114" | |
} | |
] | |
}, | |
"RF01116": { | |
"AC": "RF01116", | |
"ID": "Yfr1", | |
"DE": "Cyanobacterial functional RNA 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01116" | |
} | |
] | |
}, | |
"RF01117": { | |
"AC": "RF01117", | |
"ID": "ciona-mir-92", | |
"DE": "Ciona microRNA mir-92", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Ciona microRNA mir-92" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01117" | |
} | |
] | |
}, | |
"RF01118": { | |
"AC": "RF01118", | |
"ID": "PK-G12rRNA", | |
"DE": "Pseudoknot of the domain G(G12) of 23S ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "Pseudoknot of the domain G(G12) of 23S ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01118" | |
} | |
] | |
}, | |
"RF01119": { | |
"AC": "RF01119", | |
"ID": "sR32", | |
"DE": "Small nucleolar RNA sR32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01119" | |
} | |
] | |
}, | |
"RF01120": { | |
"AC": "RF01120", | |
"ID": "sR33", | |
"DE": "Small nucleolar RNA sR33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01120" | |
} | |
] | |
}, | |
"RF01121": { | |
"AC": "RF01121", | |
"ID": "sR38", | |
"DE": "Small nucleolar RNA sR38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01121" | |
} | |
] | |
}, | |
"RF01122": { | |
"AC": "RF01122", | |
"ID": "sR39", | |
"DE": "Small nucleolar RNA sR39", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR39" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01122" | |
} | |
] | |
}, | |
"RF01123": { | |
"AC": "RF01123", | |
"ID": "sR35", | |
"DE": "Small nucleolar RNA sR35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01123" | |
} | |
] | |
}, | |
"RF01124": { | |
"AC": "RF01124", | |
"ID": "sR36", | |
"DE": "Small nucleolar RNA sR36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01124" | |
} | |
] | |
}, | |
"RF01125": { | |
"AC": "RF01125", | |
"ID": "sR4", | |
"DE": "Small nucleolar RNA sR4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01125" | |
} | |
] | |
}, | |
"RF01126": { | |
"AC": "RF01126", | |
"ID": "sR41", | |
"DE": "Small nucleolar RNA sR41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01126" | |
} | |
] | |
}, | |
"RF01127": { | |
"AC": "RF01127", | |
"ID": "sR42", | |
"DE": "Small nucleolar RNA sR42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01127" | |
} | |
] | |
}, | |
"RF01128": { | |
"AC": "RF01128", | |
"ID": "sR43", | |
"DE": "Small nucleolar RNA sR42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01128" | |
} | |
] | |
}, | |
"RF01129": { | |
"AC": "RF01129", | |
"ID": "sR44", | |
"DE": "Small nucleolar RNA sR44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01129" | |
} | |
] | |
}, | |
"RF01130": { | |
"AC": "RF01130", | |
"ID": "sR46", | |
"DE": "Small nucleolar RNA sR46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01130" | |
} | |
] | |
}, | |
"RF01131": { | |
"AC": "RF01131", | |
"ID": "sR47", | |
"DE": "Small nucleolar RNA sR47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01131" | |
} | |
] | |
}, | |
"RF01132": { | |
"AC": "RF01132", | |
"ID": "sR48", | |
"DE": "Small nucleolar RNA sR48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01132" | |
} | |
] | |
}, | |
"RF01133": { | |
"AC": "RF01133", | |
"ID": "sR3", | |
"DE": "Small nucleolar RNA sR3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01133" | |
} | |
] | |
}, | |
"RF01134": { | |
"AC": "RF01134", | |
"ID": "sR30", | |
"DE": "Small nucleolar RNA sR30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01134" | |
} | |
] | |
}, | |
"RF01135": { | |
"AC": "RF01135", | |
"ID": "sR24", | |
"DE": "Small nucleolar RNA sR24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01135" | |
} | |
] | |
}, | |
"RF01136": { | |
"AC": "RF01136", | |
"ID": "sR28", | |
"DE": "Small nucleolar RNA sR28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01136" | |
} | |
] | |
}, | |
"RF01137": { | |
"AC": "RF01137", | |
"ID": "sR21", | |
"DE": "Small nucleolar RNA sR21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01137" | |
} | |
] | |
}, | |
"RF01138": { | |
"AC": "RF01138", | |
"ID": "sR23", | |
"DE": "Small nucleolar RNA sR23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01138" | |
} | |
] | |
}, | |
"RF01139": { | |
"AC": "RF01139", | |
"ID": "sR2", | |
"DE": "Small nucleolar RNA sR2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01139" | |
} | |
] | |
}, | |
"RF01140": { | |
"AC": "RF01140", | |
"ID": "sR20", | |
"DE": "Small nucleolar RNA sR20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01140" | |
} | |
] | |
}, | |
"RF01141": { | |
"AC": "RF01141", | |
"ID": "sR18", | |
"DE": "Small nucleolar RNA sR18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01141" | |
} | |
] | |
}, | |
"RF01142": { | |
"AC": "RF01142", | |
"ID": "sR19", | |
"DE": "Small nucleolar RNA sR19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01142" | |
} | |
] | |
}, | |
"RF01143": { | |
"AC": "RF01143", | |
"ID": "sR16", | |
"DE": "Small nucleolar RNA sR16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01143" | |
} | |
] | |
}, | |
"RF01144": { | |
"AC": "RF01144", | |
"ID": "sR17", | |
"DE": "Small nucleolar RNA sR17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01144" | |
} | |
] | |
}, | |
"RF01145": { | |
"AC": "RF01145", | |
"ID": "sR14", | |
"DE": "Small nucleolar RNA sR14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01145" | |
} | |
] | |
}, | |
"RF01146": { | |
"AC": "RF01146", | |
"ID": "sR15", | |
"DE": "Small nucleolar RNA sR15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01146" | |
} | |
] | |
}, | |
"RF01147": { | |
"AC": "RF01147", | |
"ID": "sR12", | |
"DE": "Small nucleolar RNA sR12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01147" | |
} | |
] | |
}, | |
"RF01149": { | |
"AC": "RF01149", | |
"ID": "sR10", | |
"DE": "Small nucleolar RNA sR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01149" | |
} | |
] | |
}, | |
"RF01150": { | |
"AC": "RF01150", | |
"ID": "sR11", | |
"DE": "Small nucleolar RNA sR11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01150" | |
} | |
] | |
}, | |
"RF01151": { | |
"AC": "RF01151", | |
"ID": "snoU82P", | |
"DE": "Small nucleolar RNA U82P", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U82P" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01151" | |
} | |
] | |
}, | |
"RF01152": { | |
"AC": "RF01152", | |
"ID": "sR1", | |
"DE": "Small nucleolar RNA sR1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01152" | |
} | |
] | |
}, | |
"RF01153": { | |
"AC": "RF01153", | |
"ID": "sn3060", | |
"DE": "Small nucleolar RNA sn3060", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn3060" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01153" | |
} | |
] | |
}, | |
"RF01155": { | |
"AC": "RF01155", | |
"ID": "snoR101", | |
"DE": "Small nucleolar RNA snoR101", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR101" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01155" | |
} | |
] | |
}, | |
"RF01156": { | |
"AC": "RF01156", | |
"ID": "SNORD123", | |
"DE": "Small nucleolar RNA SNORD123", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD123" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01156" | |
} | |
] | |
}, | |
"RF01157": { | |
"AC": "RF01157", | |
"ID": "sn1185", | |
"DE": "Small nucleolar RNA sn1185", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn1185" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01157" | |
} | |
] | |
}, | |
"RF01158": { | |
"AC": "RF01158", | |
"ID": "SNORD108", | |
"DE": "Small nucleolar RNA SNORD108", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD108" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01158" | |
} | |
] | |
}, | |
"RF01159": { | |
"AC": "RF01159", | |
"ID": "snoU18", | |
"DE": "Small nucleolar RNA U18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01159" | |
} | |
] | |
}, | |
"RF01160": { | |
"AC": "RF01160", | |
"ID": "sn2841", | |
"DE": "Small nucleolar RNA sn2841", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2841" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01160" | |
} | |
] | |
}, | |
"RF01161": { | |
"AC": "RF01161", | |
"ID": "SNORD5", | |
"DE": "Small nucleolar RNA SNORD5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01161" | |
} | |
] | |
}, | |
"RF01162": { | |
"AC": "RF01162", | |
"ID": "sn668", | |
"DE": "Small nucleolar RNA sn668", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn668" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01162" | |
} | |
] | |
}, | |
"RF01163": { | |
"AC": "RF01163", | |
"ID": "snoR64a", | |
"DE": "Small nucleolar RNA snoR64a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR64a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01163" | |
} | |
] | |
}, | |
"RF01164": { | |
"AC": "RF01164", | |
"ID": "SNORD107", | |
"DE": "Small nucleolar RNA SNORD107", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD107" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01164" | |
} | |
] | |
}, | |
"RF01165": { | |
"AC": "RF01165", | |
"ID": "sn2317", | |
"DE": "Small nucleolar RNA sn2317", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2317" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01165" | |
} | |
] | |
}, | |
"RF01166": { | |
"AC": "RF01166", | |
"ID": "sn3071", | |
"DE": "Small nucleolar RNA sn3071", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn3071" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01166" | |
} | |
] | |
}, | |
"RF01167": { | |
"AC": "RF01167", | |
"ID": "sn2429", | |
"DE": "Small nucleolar RNA sn2429", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2429" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01167" | |
} | |
] | |
}, | |
"RF01168": { | |
"AC": "RF01168", | |
"ID": "SNORD126", | |
"DE": "Small nucleolar RNA SNORD126", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD126" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01168" | |
} | |
] | |
}, | |
"RF01169": { | |
"AC": "RF01169", | |
"ID": "SNORD112", | |
"DE": "Small nucleolar RNA SNORD112", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD112" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01169" | |
} | |
] | |
}, | |
"RF01170": { | |
"AC": "RF01170", | |
"ID": "snoU61", | |
"DE": "Small nucleolar RNA U61", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U61" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01170" | |
} | |
] | |
}, | |
"RF01171": { | |
"AC": "RF01171", | |
"ID": "snoR4", | |
"DE": "Small nucleolar RNA snoR4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01171" | |
} | |
] | |
}, | |
"RF01172": { | |
"AC": "RF01172", | |
"ID": "sn2343", | |
"DE": "Small nucleolar RNA sn2343", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2343" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01172" | |
} | |
] | |
}, | |
"RF01173": { | |
"AC": "RF01173", | |
"ID": "snoU105B", | |
"DE": "Small nucleolar RNA U105B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U105B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01173" | |
} | |
] | |
}, | |
"RF01174": { | |
"AC": "RF01174", | |
"ID": "snoU43", | |
"DE": "Small nucleolar RNA U43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01174" | |
} | |
] | |
}, | |
"RF01175": { | |
"AC": "RF01175", | |
"ID": "snoU83D", | |
"DE": "Small nucleolar RNA U83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01175" | |
} | |
] | |
}, | |
"RF01176": { | |
"AC": "RF01176", | |
"ID": "snR78", | |
"DE": "Small nucleolar RNA snR78", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR78" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01176" | |
} | |
] | |
}, | |
"RF01177": { | |
"AC": "RF01177", | |
"ID": "snR67", | |
"DE": "Small nucleolar RNA snR67", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR67" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01177" | |
} | |
] | |
}, | |
"RF01178": { | |
"AC": "RF01178", | |
"ID": "snoR77Y", | |
"DE": "Small nucleolar RNA snoR77Y", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR77Y" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01178" | |
} | |
] | |
}, | |
"RF01179": { | |
"AC": "RF01179", | |
"ID": "snoU83", | |
"DE": "Small nucleolar RNA U83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01179" | |
} | |
] | |
}, | |
"RF01180": { | |
"AC": "RF01180", | |
"ID": "snoR110", | |
"DE": "Small nucleolar RNA snoR110", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR110" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01180" | |
} | |
] | |
}, | |
"RF01181": { | |
"AC": "RF01181", | |
"ID": "snR77", | |
"DE": "Small nucleolar RNA snR77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01181" | |
} | |
] | |
}, | |
"RF01182": { | |
"AC": "RF01182", | |
"ID": "SNORD11", | |
"DE": "Small nucleolar RNA SNORD11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01182" | |
} | |
] | |
}, | |
"RF01183": { | |
"AC": "RF01183", | |
"ID": "SNORD19B", | |
"DE": "Small nucleolar RNA SNORD19B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD19B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01183" | |
} | |
] | |
}, | |
"RF01184": { | |
"AC": "RF01184", | |
"ID": "snR79", | |
"DE": "Small nucleolar RNA snR79", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR79" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01184" | |
} | |
] | |
}, | |
"RF01185": { | |
"AC": "RF01185", | |
"ID": "snR75", | |
"DE": "Small nucleolar RNA snR75", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR75" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01185" | |
} | |
] | |
}, | |
"RF01186": { | |
"AC": "RF01186", | |
"ID": "SNORD127", | |
"DE": "Small nucleolar RNA SNORD127", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD127" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01186" | |
} | |
] | |
}, | |
"RF01188": { | |
"AC": "RF01188", | |
"ID": "snR56", | |
"DE": "Small nucleolar RNA snR56", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR56" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01188" | |
} | |
] | |
}, | |
"RF01189": { | |
"AC": "RF01189", | |
"ID": "sn1502", | |
"DE": "Small nucleolar RNA sn1502", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn1502" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01189" | |
} | |
] | |
}, | |
"RF01190": { | |
"AC": "RF01190", | |
"ID": "snR50", | |
"DE": "Small nucleolar RNA snR50", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR50" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01190" | |
} | |
] | |
}, | |
"RF01191": { | |
"AC": "RF01191", | |
"ID": "SNORD121A", | |
"DE": "Small nucleolar RNA SNORD121A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD121A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01191" | |
} | |
] | |
}, | |
"RF01192": { | |
"AC": "RF01192", | |
"ID": "SNORD11B", | |
"DE": "Small nucleolar RNA SNORD11B", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD11B" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01192" | |
} | |
] | |
}, | |
"RF01193": { | |
"AC": "RF01193", | |
"ID": "snoR20a", | |
"DE": "Small nucleolar RNA snoR20a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR20a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01193" | |
} | |
] | |
}, | |
"RF01194": { | |
"AC": "RF01194", | |
"ID": "sn2903", | |
"DE": "Small nucleolar RNA sn2903", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2903" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01194" | |
} | |
] | |
}, | |
"RF01195": { | |
"AC": "RF01195", | |
"ID": "snR52", | |
"DE": "Small nucleolar RNA snR52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01195" | |
} | |
] | |
}, | |
"RF01196": { | |
"AC": "RF01196", | |
"ID": "snoZ30a", | |
"DE": "Small nucleolar RNA Z30a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z30a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01196" | |
} | |
] | |
}, | |
"RF01197": { | |
"AC": "RF01197", | |
"ID": "snR39", | |
"DE": "Small nucleolar RNA snR39", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR39" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01197" | |
} | |
] | |
}, | |
"RF01198": { | |
"AC": "RF01198", | |
"ID": "snoR69Y", | |
"DE": "Small nucleolar RNA snoR69Y", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR69Y" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01198" | |
} | |
] | |
}, | |
"RF01199": { | |
"AC": "RF01199", | |
"ID": "snR58", | |
"DE": "Small nucleolar RNA snR58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01199" | |
} | |
] | |
}, | |
"RF01200": { | |
"AC": "RF01200", | |
"ID": "SNORD125", | |
"DE": "Small nucleolar RNA SNORD125", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD125" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01200" | |
} | |
] | |
}, | |
"RF01201": { | |
"AC": "RF01201", | |
"ID": "snR40", | |
"DE": "Small nucleolar RNA snR40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01201" | |
} | |
] | |
}, | |
"RF01202": { | |
"AC": "RF01202", | |
"ID": "sn2991", | |
"DE": "Small nucleolar RNA sn2991", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2991" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01202" | |
} | |
] | |
}, | |
"RF01203": { | |
"AC": "RF01203", | |
"ID": "snR47", | |
"DE": "Small nucleolar RNA snR47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01203" | |
} | |
] | |
}, | |
"RF01204": { | |
"AC": "RF01204", | |
"ID": "snR65", | |
"DE": "Small nucleolar RNA snR65", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR65" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01204" | |
} | |
] | |
}, | |
"RF01205": { | |
"AC": "RF01205", | |
"ID": "snR62", | |
"DE": "Small nucleolar RNA snR62", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR62" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01205" | |
} | |
] | |
}, | |
"RF01206": { | |
"AC": "RF01206", | |
"ID": "snoR109", | |
"DE": "Small nucleolar RNA snoR109", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR109" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01206" | |
} | |
] | |
}, | |
"RF01207": { | |
"AC": "RF01207", | |
"ID": "snR73", | |
"DE": "Small nucleolar RNA snR73", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR73" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01207" | |
} | |
] | |
}, | |
"RF01208": { | |
"AC": "RF01208", | |
"ID": "snoR99", | |
"DE": "Small nucleolar RNA snoR99", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR99" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01208" | |
} | |
] | |
}, | |
"RF01209": { | |
"AC": "RF01209", | |
"ID": "snR76", | |
"DE": "Small nucleolar RNA snR76", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR76" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01209" | |
} | |
] | |
}, | |
"RF01210": { | |
"AC": "RF01210", | |
"ID": "snoU13", | |
"DE": "Small nucleolar RNA U13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01210" | |
} | |
] | |
}, | |
"RF01211": { | |
"AC": "RF01211", | |
"ID": "SNORD124", | |
"DE": "Small nucleolar RNA SNORD124", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD124" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01211" | |
} | |
] | |
}, | |
"RF01212": { | |
"AC": "RF01212", | |
"ID": "sn2524", | |
"DE": "Small nucleolar RNA sn2524", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2524" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01212" | |
} | |
] | |
}, | |
"RF01213": { | |
"AC": "RF01213", | |
"ID": "snoR103", | |
"DE": "Small nucleolar RNA snoR103", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR103" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01213" | |
} | |
] | |
}, | |
"RF01214": { | |
"AC": "RF01214", | |
"ID": "snR51", | |
"DE": "Small nucleolar RNA snR51", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR51" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01214" | |
} | |
] | |
}, | |
"RF01215": { | |
"AC": "RF01215", | |
"ID": "snoR97", | |
"DE": "Small nucleolar RNA snoR97", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR97" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01215" | |
} | |
] | |
}, | |
"RF01216": { | |
"AC": "RF01216", | |
"ID": "snR87", | |
"DE": "Small nucleolar RNA snR87", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR87" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01216" | |
} | |
] | |
}, | |
"RF01218": { | |
"AC": "RF01218", | |
"ID": "snR41", | |
"DE": "Small nucleolar RNA snR41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01218" | |
} | |
] | |
}, | |
"RF01219": { | |
"AC": "RF01219", | |
"ID": "snoR100", | |
"DE": "Small nucleolar RNA snoR100", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR100" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01219" | |
} | |
] | |
}, | |
"RF01220": { | |
"AC": "RF01220", | |
"ID": "snoR104", | |
"DE": "Small nucleolar RNA snoR104", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR104" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01220" | |
} | |
] | |
}, | |
"RF01221": { | |
"AC": "RF01221", | |
"ID": "snoU6-47", | |
"DE": "Small nucleolar RNA U6-47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U6-47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01221" | |
} | |
] | |
}, | |
"RF01222": { | |
"AC": "RF01222", | |
"ID": "sn2417", | |
"DE": "Small nucleolar RNA sn2417", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sn2417" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01222" | |
} | |
] | |
}, | |
"RF01223": { | |
"AC": "RF01223", | |
"ID": "snR13", | |
"DE": "Small nucleolar RNA snR13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01223" | |
} | |
] | |
}, | |
"RF01224": { | |
"AC": "RF01224", | |
"ID": "snoR80", | |
"DE": "Small nucleolar RNA snoR80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01224" | |
} | |
] | |
}, | |
"RF01225": { | |
"AC": "RF01225", | |
"ID": "ACA64", | |
"DE": "Small nucleolar RNA ACA64", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA ACA64" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01225" | |
} | |
] | |
}, | |
"RF01226": { | |
"AC": "RF01226", | |
"ID": "snoZ5", | |
"DE": "Small nucleolar RNA Z5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA Z5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01226" | |
} | |
] | |
}, | |
"RF01227": { | |
"AC": "RF01227", | |
"ID": "snoR83", | |
"DE": "Small nucleolar RNA snoR83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01227" | |
} | |
] | |
}, | |
"RF01228": { | |
"AC": "RF01228", | |
"ID": "snoR111", | |
"DE": "Small nucleolar RNA snoR111", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR111" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01228" | |
} | |
] | |
}, | |
"RF01229": { | |
"AC": "RF01229", | |
"ID": "SNORA84", | |
"DE": "Small nucleolar RNA SNORA84", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA84" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01229" | |
} | |
] | |
}, | |
"RF01230": { | |
"AC": "RF01230", | |
"ID": "snoR77", | |
"DE": "Small nucleolar RNA snoR77", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR77" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01230" | |
} | |
] | |
}, | |
"RF01231": { | |
"AC": "RF01231", | |
"ID": "snoR74", | |
"DE": "Small nucleolar RNA snoR74", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR74" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01231" | |
} | |
] | |
}, | |
"RF01232": { | |
"AC": "RF01232", | |
"ID": "snoR442", | |
"DE": "Small nucleolar RNA R442", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA R442" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01232" | |
} | |
] | |
}, | |
"RF01233": { | |
"AC": "RF01233", | |
"ID": "snoU109", | |
"DE": "Small nucleolar RNA U109", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U109" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01233" | |
} | |
] | |
}, | |
"RF01234": { | |
"AC": "RF01234", | |
"ID": "SNORA47", | |
"DE": "Small nucleolar RNA SNORA47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01234" | |
} | |
] | |
}, | |
"RF01235": { | |
"AC": "RF01235", | |
"ID": "snR68", | |
"DE": "Small nucleolar RNA snR68", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR68" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01235" | |
} | |
] | |
}, | |
"RF01236": { | |
"AC": "RF01236", | |
"ID": "snoU19", | |
"DE": "Small nucleolar RNA U19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01236" | |
} | |
] | |
}, | |
"RF01237": { | |
"AC": "RF01237", | |
"ID": "snR161", | |
"DE": "Small nucleolar RNA snR161", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR161" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01237" | |
} | |
] | |
}, | |
"RF01238": { | |
"AC": "RF01238", | |
"ID": "snR70", | |
"DE": "Small nucleolar RNA snR70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01238" | |
} | |
] | |
}, | |
"RF01239": { | |
"AC": "RF01239", | |
"ID": "snR49", | |
"DE": "Small nucleolar RNA snR49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01239" | |
} | |
] | |
}, | |
"RF01240": { | |
"AC": "RF01240", | |
"ID": "snR85", | |
"DE": "Small nucleolar RNA snR85", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR85" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01240" | |
} | |
] | |
}, | |
"RF01241": { | |
"AC": "RF01241", | |
"ID": "SNORA81", | |
"DE": "Small nucleolar RNA SNORA81", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORA81" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01241" | |
} | |
] | |
}, | |
"RF01242": { | |
"AC": "RF01242", | |
"ID": "snR36", | |
"DE": "Small nucleolar RNA snR36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01242" | |
} | |
] | |
}, | |
"RF01243": { | |
"AC": "RF01243", | |
"ID": "snR33", | |
"DE": "Small nucleolar RNA snR33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01243" | |
} | |
] | |
}, | |
"RF01244": { | |
"AC": "RF01244", | |
"ID": "snR4", | |
"DE": "Small nucleolar RNA snR4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01244" | |
} | |
] | |
}, | |
"RF01245": { | |
"AC": "RF01245", | |
"ID": "snR9", | |
"DE": "Small nucleolar RNA snR9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01245" | |
} | |
] | |
}, | |
"RF01246": { | |
"AC": "RF01246", | |
"ID": "snR81", | |
"DE": "Small nucleolar RNA snR81", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR81" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01246" | |
} | |
] | |
}, | |
"RF01247": { | |
"AC": "RF01247", | |
"ID": "snR32", | |
"DE": "Small nucleolar RNA snR32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01247" | |
} | |
] | |
}, | |
"RF01248": { | |
"AC": "RF01248", | |
"ID": "snR8", | |
"DE": "Small nucleolar RNA snR8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01248" | |
} | |
] | |
}, | |
"RF01249": { | |
"AC": "RF01249", | |
"ID": "snR190", | |
"DE": "Small nucleolar RNA snR190", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR190" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01249" | |
} | |
] | |
}, | |
"RF01250": { | |
"AC": "RF01250", | |
"ID": "snR189", | |
"DE": "Small nucleolar RNA snR189", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR189" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01250" | |
} | |
] | |
}, | |
"RF01251": { | |
"AC": "RF01251", | |
"ID": "snR3", | |
"DE": "Small nucleolar RNA snR3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01251" | |
} | |
] | |
}, | |
"RF01252": { | |
"AC": "RF01252", | |
"ID": "snR5", | |
"DE": "Small nucleolar RNA snR5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01252" | |
} | |
] | |
}, | |
"RF01253": { | |
"AC": "RF01253", | |
"ID": "snR46", | |
"DE": "Small nucleolar RNA snR46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01253" | |
} | |
] | |
}, | |
"RF01254": { | |
"AC": "RF01254", | |
"ID": "snR34", | |
"DE": "Small nucleolar RNA snR34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01254" | |
} | |
] | |
}, | |
"RF01255": { | |
"AC": "RF01255", | |
"ID": "snR35", | |
"DE": "Small nucleolar RNA snR35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01255" | |
} | |
] | |
}, | |
"RF01256": { | |
"AC": "RF01256", | |
"ID": "snR43", | |
"DE": "Small nucleolar RNA snR43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01256" | |
} | |
] | |
}, | |
"RF01257": { | |
"AC": "RF01257", | |
"ID": "snR31", | |
"DE": "Small nucleolar RNA snR31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01257" | |
} | |
] | |
}, | |
"RF01258": { | |
"AC": "RF01258", | |
"ID": "snR10", | |
"DE": "Small nucleolar RNA snR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01258" | |
} | |
] | |
}, | |
"RF01259": { | |
"AC": "RF01259", | |
"ID": "snR63", | |
"DE": "Small nucleolar RNA snR63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01259" | |
} | |
] | |
}, | |
"RF01260": { | |
"AC": "RF01260", | |
"ID": "snR11", | |
"DE": "Small nucleolar RNA snR11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01260" | |
} | |
] | |
}, | |
"RF01261": { | |
"AC": "RF01261", | |
"ID": "snR82", | |
"DE": "Small nucleolar RNA snR82", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR82" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01261" | |
} | |
] | |
}, | |
"RF01262": { | |
"AC": "RF01262", | |
"ID": "snR44", | |
"DE": "Small nucleolar RNA snR44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01262" | |
} | |
] | |
}, | |
"RF01263": { | |
"AC": "RF01263", | |
"ID": "snR191", | |
"DE": "Small nucleolar RNA snR191", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR191" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01263" | |
} | |
] | |
}, | |
"RF01264": { | |
"AC": "RF01264", | |
"ID": "snR83", | |
"DE": "Small nucleolar RNA snR83", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR83" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01264" | |
} | |
] | |
}, | |
"RF01265": { | |
"AC": "RF01265", | |
"ID": "snR42", | |
"DE": "Small nucleolar RNA snR42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01265" | |
} | |
] | |
}, | |
"RF01266": { | |
"AC": "RF01266", | |
"ID": "snR45", | |
"DE": "Small nucleolar RNA snR45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01266" | |
} | |
] | |
}, | |
"RF01267": { | |
"AC": "RF01267", | |
"ID": "snR37", | |
"DE": "Small nucleolar RNA snR37", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR37" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01267" | |
} | |
] | |
}, | |
"RF01268": { | |
"AC": "RF01268", | |
"ID": "SCARNA2", | |
"DE": "Small Cajal body-specific RNA 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body-specific RNA 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01268" | |
} | |
] | |
}, | |
"RF01269": { | |
"AC": "RF01269", | |
"ID": "snR80", | |
"DE": "Small nucleolar RNA snR80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01269" | |
} | |
] | |
}, | |
"RF01270": { | |
"AC": "RF01270", | |
"ID": "snR84", | |
"DE": "Small nucleolar RNA snR84", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR84" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01270" | |
} | |
] | |
}, | |
"RF01271": { | |
"AC": "RF01271", | |
"ID": "snR30", | |
"DE": "Small nucleolar RNA snR30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01271" | |
} | |
] | |
}, | |
"RF01272": { | |
"AC": "RF01272", | |
"ID": "snR86", | |
"DE": "Small nucleolar RNA snR86", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snR86" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01272" | |
} | |
] | |
}, | |
"RF01273": { | |
"AC": "RF01273", | |
"ID": "sR34", | |
"DE": "Small nucleolar RNA sR34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01273" | |
} | |
] | |
}, | |
"RF01274": { | |
"AC": "RF01274", | |
"ID": "sR45", | |
"DE": "Small nucleolar RNA sR45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01274" | |
} | |
] | |
}, | |
"RF01275": { | |
"AC": "RF01275", | |
"ID": "sR22", | |
"DE": "Small nucleolar RNA sR22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01275" | |
} | |
] | |
}, | |
"RF01276": { | |
"AC": "RF01276", | |
"ID": "sR53", | |
"DE": "Small nucleolar RNA sR53", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR53" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01276" | |
} | |
] | |
}, | |
"RF01277": { | |
"AC": "RF01277", | |
"ID": "snoU54", | |
"DE": "Small nucleolar RNA U54", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U54" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01277" | |
} | |
] | |
}, | |
"RF01278": { | |
"AC": "RF01278", | |
"ID": "SNORD109A", | |
"DE": "Small nucleolar RNA SNORD109A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD109A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01278" | |
} | |
] | |
}, | |
"RF01279": { | |
"AC": "RF01279", | |
"ID": "snoR53Y", | |
"DE": "Small nucleolar RNA snoR53Y", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR53Y" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01279" | |
} | |
] | |
}, | |
"RF01280": { | |
"AC": "RF01280", | |
"ID": "snoR14", | |
"DE": "Small nucleolar RNA snoR14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01280" | |
} | |
] | |
}, | |
"RF01281": { | |
"AC": "RF01281", | |
"ID": "snoR35", | |
"DE": "Small nucleolar RNA snoR35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01281" | |
} | |
] | |
}, | |
"RF01283": { | |
"AC": "RF01283", | |
"ID": "snoU30", | |
"DE": "Small nucleolar RNA U30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01283" | |
} | |
] | |
}, | |
"RF01284": { | |
"AC": "RF01284", | |
"ID": "snoR8a", | |
"DE": "Small nucleolar RNA snoR8a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR8a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01284" | |
} | |
] | |
}, | |
"RF01285": { | |
"AC": "RF01285", | |
"ID": "snoU31b", | |
"DE": "Small nucleolar RNA U31b", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U31b" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01285" | |
} | |
] | |
}, | |
"RF01286": { | |
"AC": "RF01286", | |
"ID": "snoR26", | |
"DE": "Small nucleolar RNA snoR26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01286" | |
} | |
] | |
}, | |
"RF01287": { | |
"AC": "RF01287", | |
"ID": "snoR27", | |
"DE": "Small nucleolar RNA snoR27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01287" | |
} | |
] | |
}, | |
"RF01288": { | |
"AC": "RF01288", | |
"ID": "snoR31", | |
"DE": "Small nucleolar RNA snoR31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01288" | |
} | |
] | |
}, | |
"RF01289": { | |
"AC": "RF01289", | |
"ID": "snoR17", | |
"DE": "Small nucleolar RNA snoR17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01289" | |
} | |
] | |
}, | |
"RF01290": { | |
"AC": "RF01290", | |
"ID": "SNORD10", | |
"DE": "Small nucleolar RNA SNORD10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01290" | |
} | |
] | |
}, | |
"RF01291": { | |
"AC": "RF01291", | |
"ID": "SNORD97", | |
"DE": "Small nucleolar RNA SNORD97", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD97" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01291" | |
} | |
] | |
}, | |
"RF01292": { | |
"AC": "RF01292", | |
"ID": "snoR2", | |
"DE": "Small nucleolar RNA snoR2/U65", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR2/U65" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01292" | |
} | |
] | |
}, | |
"RF01293": { | |
"AC": "RF01293", | |
"ID": "ACA59", | |
"DE": "Small nucleolar RNA ACA59", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA ACA59" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01293" | |
} | |
] | |
}, | |
"RF01294": { | |
"AC": "RF01294", | |
"ID": "snoU89", | |
"DE": "Small nucleolar RNA U89", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U89" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01294" | |
} | |
] | |
}, | |
"RF01295": { | |
"AC": "RF01295", | |
"ID": "SCARNA7", | |
"DE": "Small Cajal body-specific RNA 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small Cajal body-specific RNA 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01295" | |
} | |
] | |
}, | |
"RF01296": { | |
"AC": "RF01296", | |
"ID": "snoU85", | |
"DE": "Small nucleolar RNA U85", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U85" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01296" | |
} | |
] | |
}, | |
"RF01297": { | |
"AC": "RF01297", | |
"ID": "sR40", | |
"DE": "Small nucleolar RNA sR40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01297" | |
} | |
] | |
}, | |
"RF01298": { | |
"AC": "RF01298", | |
"ID": "snoU25", | |
"DE": "Small nucleolar RNA U25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01298" | |
} | |
] | |
}, | |
"RF01299": { | |
"AC": "RF01299", | |
"ID": "SNORD2", | |
"DE": "Small nucleolar RNA SNORD2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA SNORD2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01299" | |
} | |
] | |
}, | |
"RF01300": { | |
"AC": "RF01300", | |
"ID": "snoU49", | |
"DE": "Small nucleolar RNA U49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA U49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01300" | |
} | |
] | |
}, | |
"RF01301": { | |
"AC": "RF01301", | |
"ID": "snoR4a", | |
"DE": "Small nucleolar RNA snoR4a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR4a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01301" | |
} | |
] | |
}, | |
"RF01302": { | |
"AC": "RF01302", | |
"ID": "snoU36a", | |
"DE": "SnoRNA U36a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "SnoRNA U36a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01302" | |
} | |
] | |
}, | |
"RF01303": { | |
"AC": "RF01303", | |
"ID": "sR49", | |
"DE": "Small nucleolar RNA sR49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01303" | |
} | |
] | |
}, | |
"RF01304": { | |
"AC": "RF01304", | |
"ID": "sR5", | |
"DE": "Small nucleolar RNA sR5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01304" | |
} | |
] | |
}, | |
"RF01305": { | |
"AC": "RF01305", | |
"ID": "sR51", | |
"DE": "Small nucleolar RNA sR51", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR51" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01305" | |
} | |
] | |
}, | |
"RF01306": { | |
"AC": "RF01306", | |
"ID": "sR52", | |
"DE": "Small nucleolar RNA sR52", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR52" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01306" | |
} | |
] | |
}, | |
"RF01307": { | |
"AC": "RF01307", | |
"ID": "sR55", | |
"DE": "Small nucleolar RNA sR55", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR55" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01307" | |
} | |
] | |
}, | |
"RF01308": { | |
"AC": "RF01308", | |
"ID": "sR58", | |
"DE": "Small nucleolar RNA sR58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01308" | |
} | |
] | |
}, | |
"RF01309": { | |
"AC": "RF01309", | |
"ID": "sR60", | |
"DE": "Small nucleolar RNA sR60", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR60" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01309" | |
} | |
] | |
}, | |
"RF01310": { | |
"AC": "RF01310", | |
"ID": "sR7", | |
"DE": "Small nucleolar RNA sR7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01310" | |
} | |
] | |
}, | |
"RF01312": { | |
"AC": "RF01312", | |
"ID": "sR9", | |
"DE": "Small nucleolar RNA sR9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01312" | |
} | |
] | |
}, | |
"RF01313": { | |
"AC": "RF01313", | |
"ID": "AHBV_epsilon", | |
"DE": "Avian HBV RNA encapsidation signal epsilon", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01313" | |
} | |
] | |
}, | |
"RF01314": { | |
"AC": "RF01314", | |
"ID": "mir-1227", | |
"DE": "microRNA mir-1227", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1227" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01314" | |
} | |
] | |
}, | |
"RF01315": { | |
"AC": "RF01315", | |
"ID": "CRISPR-DR2", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01315" | |
} | |
] | |
}, | |
"RF01316": { | |
"AC": "RF01316", | |
"ID": "CRISPR-DR3", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01316" | |
} | |
] | |
}, | |
"RF01317": { | |
"AC": "RF01317", | |
"ID": "CRISPR-DR4", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01317" | |
} | |
] | |
}, | |
"RF01318": { | |
"AC": "RF01318", | |
"ID": "CRISPR-DR5", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01318" | |
} | |
] | |
}, | |
"RF01319": { | |
"AC": "RF01319", | |
"ID": "CRISPR-DR6", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01319" | |
} | |
] | |
}, | |
"RF01320": { | |
"AC": "RF01320", | |
"ID": "CRISPR-DR7", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01320" | |
} | |
] | |
}, | |
"RF01321": { | |
"AC": "RF01321", | |
"ID": "CRISPR-DR8", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01321" | |
} | |
] | |
}, | |
"RF01322": { | |
"AC": "RF01322", | |
"ID": "CRISPR-DR9", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01322" | |
} | |
] | |
}, | |
"RF01323": { | |
"AC": "RF01323", | |
"ID": "CRISPR-DR10", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01323" | |
} | |
] | |
}, | |
"RF01324": { | |
"AC": "RF01324", | |
"ID": "CRISPR-DR11", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01324" | |
} | |
] | |
}, | |
"RF01325": { | |
"AC": "RF01325", | |
"ID": "CRISPR-DR12", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01325" | |
} | |
] | |
}, | |
"RF01326": { | |
"AC": "RF01326", | |
"ID": "CRISPR-DR13", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01326" | |
} | |
] | |
}, | |
"RF01327": { | |
"AC": "RF01327", | |
"ID": "CRISPR-DR14", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01327" | |
} | |
] | |
}, | |
"RF01328": { | |
"AC": "RF01328", | |
"ID": "CRISPR-DR17", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01328" | |
} | |
] | |
}, | |
"RF01329": { | |
"AC": "RF01329", | |
"ID": "CRISPR-DR15", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01329" | |
} | |
] | |
}, | |
"RF01330": { | |
"AC": "RF01330", | |
"ID": "CRISPR-DR16", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01330" | |
} | |
] | |
}, | |
"RF01331": { | |
"AC": "RF01331", | |
"ID": "CRISPR-DR18", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01331" | |
} | |
] | |
}, | |
"RF01332": { | |
"AC": "RF01332", | |
"ID": "CRISPR-DR19", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01332" | |
} | |
] | |
}, | |
"RF01333": { | |
"AC": "RF01333", | |
"ID": "CRISPR-DR20", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01333" | |
} | |
] | |
}, | |
"RF01334": { | |
"AC": "RF01334", | |
"ID": "CRISPR-DR21", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01334" | |
} | |
] | |
}, | |
"RF01335": { | |
"AC": "RF01335", | |
"ID": "CRISPR-DR22", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01335" | |
} | |
] | |
}, | |
"RF01336": { | |
"AC": "RF01336", | |
"ID": "CRISPR-DR23", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01336" | |
} | |
] | |
}, | |
"RF01337": { | |
"AC": "RF01337", | |
"ID": "CRISPR-DR24", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01337" | |
} | |
] | |
}, | |
"RF01338": { | |
"AC": "RF01338", | |
"ID": "CRISPR-DR25", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01338" | |
} | |
] | |
}, | |
"RF01339": { | |
"AC": "RF01339", | |
"ID": "CRISPR-DR27", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01339" | |
} | |
] | |
}, | |
"RF01340": { | |
"AC": "RF01340", | |
"ID": "CRISPR-DR29", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01340" | |
} | |
] | |
}, | |
"RF01341": { | |
"AC": "RF01341", | |
"ID": "CRISPR-DR30", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01341" | |
} | |
] | |
}, | |
"RF01342": { | |
"AC": "RF01342", | |
"ID": "CRISPR-DR32", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01342" | |
} | |
] | |
}, | |
"RF01343": { | |
"AC": "RF01343", | |
"ID": "CRISPR-DR33", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01343" | |
} | |
] | |
}, | |
"RF01344": { | |
"AC": "RF01344", | |
"ID": "CRISPR-DR34", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01344" | |
} | |
] | |
}, | |
"RF01345": { | |
"AC": "RF01345", | |
"ID": "CRISPR-DR35", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01345" | |
} | |
] | |
}, | |
"RF01346": { | |
"AC": "RF01346", | |
"ID": "CRISPR-DR36", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01346" | |
} | |
] | |
}, | |
"RF01347": { | |
"AC": "RF01347", | |
"ID": "CRISPR-DR37", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01347" | |
} | |
] | |
}, | |
"RF01348": { | |
"AC": "RF01348", | |
"ID": "CRISPR-DR38", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01348" | |
} | |
] | |
}, | |
"RF01349": { | |
"AC": "RF01349", | |
"ID": "CRISPR-DR40", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01349" | |
} | |
] | |
}, | |
"RF01350": { | |
"AC": "RF01350", | |
"ID": "CRISPR-DR41", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01350" | |
} | |
] | |
}, | |
"RF01351": { | |
"AC": "RF01351", | |
"ID": "CRISPR-DR42", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01351" | |
} | |
] | |
}, | |
"RF01352": { | |
"AC": "RF01352", | |
"ID": "CRISPR-DR43", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01352" | |
} | |
] | |
}, | |
"RF01353": { | |
"AC": "RF01353", | |
"ID": "CRISPR-DR44", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01353" | |
} | |
] | |
}, | |
"RF01354": { | |
"AC": "RF01354", | |
"ID": "CRISPR-DR45", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01354" | |
} | |
] | |
}, | |
"RF01355": { | |
"AC": "RF01355", | |
"ID": "CRISPR-DR26", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01355" | |
} | |
] | |
}, | |
"RF01356": { | |
"AC": "RF01356", | |
"ID": "CRISPR-DR28", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01356" | |
} | |
] | |
}, | |
"RF01357": { | |
"AC": "RF01357", | |
"ID": "CRISPR-DR31", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01357" | |
} | |
] | |
}, | |
"RF01358": { | |
"AC": "RF01358", | |
"ID": "CRISPR-DR39", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01358" | |
} | |
] | |
}, | |
"RF01359": { | |
"AC": "RF01359", | |
"ID": "CRISPR-DR46", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01359" | |
} | |
] | |
}, | |
"RF01360": { | |
"AC": "RF01360", | |
"ID": "CRISPR-DR47", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01360" | |
} | |
] | |
}, | |
"RF01361": { | |
"AC": "RF01361", | |
"ID": "CRISPR-DR48", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01361" | |
} | |
] | |
}, | |
"RF01362": { | |
"AC": "RF01362", | |
"ID": "CRISPR-DR49", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01362" | |
} | |
] | |
}, | |
"RF01363": { | |
"AC": "RF01363", | |
"ID": "CRISPR-DR50", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01363" | |
} | |
] | |
}, | |
"RF01364": { | |
"AC": "RF01364", | |
"ID": "CRISPR-DR51", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01364" | |
} | |
] | |
}, | |
"RF01365": { | |
"AC": "RF01365", | |
"ID": "CRISPR-DR52", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01365" | |
} | |
] | |
}, | |
"RF01366": { | |
"AC": "RF01366", | |
"ID": "CRISPR-DR53", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01366" | |
} | |
] | |
}, | |
"RF01367": { | |
"AC": "RF01367", | |
"ID": "CRISPR-DR54", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01367" | |
} | |
] | |
}, | |
"RF01368": { | |
"AC": "RF01368", | |
"ID": "CRISPR-DR55", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01368" | |
} | |
] | |
}, | |
"RF01369": { | |
"AC": "RF01369", | |
"ID": "CRISPR-DR56", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01369" | |
} | |
] | |
}, | |
"RF01370": { | |
"AC": "RF01370", | |
"ID": "CRISPR-DR57", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01370" | |
} | |
] | |
}, | |
"RF01371": { | |
"AC": "RF01371", | |
"ID": "CRISPR-DR58", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01371" | |
} | |
] | |
}, | |
"RF01373": { | |
"AC": "RF01373", | |
"ID": "CRISPR-DR60", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01373" | |
} | |
] | |
}, | |
"RF01374": { | |
"AC": "RF01374", | |
"ID": "CRISPR-DR61", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01374" | |
} | |
] | |
}, | |
"RF01375": { | |
"AC": "RF01375", | |
"ID": "CRISPR-DR62", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01375" | |
} | |
] | |
}, | |
"RF01376": { | |
"AC": "RF01376", | |
"ID": "CRISPR-DR63", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01376" | |
} | |
] | |
}, | |
"RF01377": { | |
"AC": "RF01377", | |
"ID": "CRISPR-DR64", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01377" | |
} | |
] | |
}, | |
"RF01378": { | |
"AC": "RF01378", | |
"ID": "CRISPR-DR65", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01378" | |
} | |
] | |
}, | |
"RF01379": { | |
"AC": "RF01379", | |
"ID": "CRISPR-DR66", | |
"DE": "CRISPR RNA direct repeat element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "CRISPR RNA direct repeat element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01379" | |
} | |
] | |
}, | |
"RF01380": { | |
"AC": "RF01380", | |
"ID": "HIV-1_SD", | |
"DE": "Human immunodeficiency virus type 1 major splice donor", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01380" | |
} | |
] | |
}, | |
"RF01381": { | |
"AC": "RF01381", | |
"ID": "HIV-1_SL3", | |
"DE": "HIV-1 stem-loop 3 Psi packaging signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01381" | |
} | |
] | |
}, | |
"RF01382": { | |
"AC": "RF01382", | |
"ID": "HIV-1_SL4", | |
"DE": "HIV-1 stem-loop 4 packaging signal", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01382" | |
} | |
] | |
}, | |
"RF01383": { | |
"AC": "RF01383", | |
"ID": "GRIK4_3p_UTR", | |
"DE": "GRIK4 3 prime UTR element", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "GRIK4 3 prime UTR element" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01383" | |
} | |
] | |
}, | |
"RF01384": { | |
"AC": "RF01384", | |
"ID": "InvR", | |
"DE": "Invasion gene-associated RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Invasion gene-associated RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01384" | |
} | |
] | |
}, | |
"RF01385": { | |
"AC": "RF01385", | |
"ID": "isrA", | |
"DE": "isrA Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrA Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01385" | |
} | |
] | |
}, | |
"RF01386": { | |
"AC": "RF01386", | |
"ID": "isrB", | |
"DE": "isrB Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrB Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01386" | |
} | |
] | |
}, | |
"RF01387": { | |
"AC": "RF01387", | |
"ID": "isrC", | |
"DE": "isrC Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrC Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01387" | |
} | |
] | |
}, | |
"RF01388": { | |
"AC": "RF01388", | |
"ID": "isrD", | |
"DE": "isrD Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrD Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01388" | |
} | |
] | |
}, | |
"RF01389": { | |
"AC": "RF01389", | |
"ID": "isrF", | |
"DE": "isrF Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrF Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01389" | |
} | |
] | |
}, | |
"RF01390": { | |
"AC": "RF01390", | |
"ID": "isrG", | |
"DE": "isrG Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrG Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01390" | |
} | |
] | |
}, | |
"RF01391": { | |
"AC": "RF01391", | |
"ID": "isrH", | |
"DE": "isrH Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrH Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01391" | |
} | |
] | |
}, | |
"RF01392": { | |
"AC": "RF01392", | |
"ID": "isrI", | |
"DE": "isrI Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrI Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01392" | |
} | |
] | |
}, | |
"RF01393": { | |
"AC": "RF01393", | |
"ID": "isrJ", | |
"DE": "isrJ Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrJ Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01393" | |
} | |
] | |
}, | |
"RF01394": { | |
"AC": "RF01394", | |
"ID": "isrK", | |
"DE": "isrK Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrK Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01394" | |
} | |
] | |
}, | |
"RF01395": { | |
"AC": "RF01395", | |
"ID": "isrL", | |
"DE": "isrL Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrL Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01395" | |
} | |
] | |
}, | |
"RF01396": { | |
"AC": "RF01396", | |
"ID": "isrN", | |
"DE": "isrN Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrN Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01396" | |
} | |
] | |
}, | |
"RF01397": { | |
"AC": "RF01397", | |
"ID": "isrO", | |
"DE": "isrO Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrO Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01397" | |
} | |
] | |
}, | |
"RF01398": { | |
"AC": "RF01398", | |
"ID": "isrP", | |
"DE": "isrP Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrP Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01398" | |
} | |
] | |
}, | |
"RF01399": { | |
"AC": "RF01399", | |
"ID": "isrQ", | |
"DE": "isrQ Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "isrQ Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01399" | |
} | |
] | |
}, | |
"RF01400": { | |
"AC": "RF01400", | |
"ID": "istR", | |
"DE": "istR Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "istR Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01400" | |
} | |
] | |
}, | |
"RF01401": { | |
"AC": "RF01401", | |
"ID": "rseX", | |
"DE": "rseX Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rseX Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01401" | |
} | |
] | |
}, | |
"RF01402": { | |
"AC": "RF01402", | |
"ID": "STnc150", | |
"DE": "STnc150 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc150 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01402" | |
} | |
] | |
}, | |
"RF01403": { | |
"AC": "RF01403", | |
"ID": "STnc290", | |
"DE": "STnc290 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc290 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01403" | |
} | |
] | |
}, | |
"RF01404": { | |
"AC": "RF01404", | |
"ID": "STnc440", | |
"DE": "STnc440 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc440 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01404" | |
} | |
] | |
}, | |
"RF01405": { | |
"AC": "RF01405", | |
"ID": "STnc490k", | |
"DE": "STnc490k Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc490k Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01405" | |
} | |
] | |
}, | |
"RF01406": { | |
"AC": "RF01406", | |
"ID": "STnc500", | |
"DE": "STnc500 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc500 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01406" | |
} | |
] | |
}, | |
"RF01407": { | |
"AC": "RF01407", | |
"ID": "STnc560", | |
"DE": "STnc560 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc560 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01407" | |
} | |
] | |
}, | |
"RF01408": { | |
"AC": "RF01408", | |
"ID": "sraL", | |
"DE": "sraL Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sraL Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01408" | |
} | |
] | |
}, | |
"RF01409": { | |
"AC": "RF01409", | |
"ID": "STnc250", | |
"DE": "STnc250 Hfq binding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STnc250 Hfq binding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01409" | |
} | |
] | |
}, | |
"RF01410": { | |
"AC": "RF01410", | |
"ID": "BsrC", | |
"DE": "BsrC", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "BsrC" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01410" | |
} | |
] | |
}, | |
"RF01411": { | |
"AC": "RF01411", | |
"ID": "BsrF", | |
"DE": "BsrF", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "BsrF" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01411" | |
} | |
] | |
}, | |
"RF01412": { | |
"AC": "RF01412", | |
"ID": "BsrG", | |
"DE": "BsrG", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "BsrG" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01412" | |
} | |
] | |
}, | |
"RF01413": { | |
"AC": "RF01413", | |
"ID": "miR-430", | |
"DE": "microRNA miR-430", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA miR-430" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01413" | |
} | |
] | |
}, | |
"RF01414": { | |
"AC": "RF01414", | |
"ID": "class_I_RNA", | |
"DE": "Class I RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Class I RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01414" | |
} | |
] | |
}, | |
"RF01415": { | |
"AC": "RF01415", | |
"ID": "Flavivirus_SLIV", | |
"DE": "Flavivirus 3'UTR stem loop IV", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01415" | |
} | |
] | |
}, | |
"RF01416": { | |
"AC": "RF01416", | |
"ID": "NrrF", | |
"DE": "NrrF RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "NrrF RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01416" | |
} | |
] | |
}, | |
"RF01417": { | |
"AC": "RF01417", | |
"ID": "RSV_RNA", | |
"DE": "Retroviral 3'UTR stability element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01417" | |
} | |
] | |
}, | |
"RF01418": { | |
"AC": "RF01418", | |
"ID": "HIV_POL-1_SL", | |
"DE": "HIV pol-1 stem loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01418" | |
} | |
] | |
}, | |
"RF01419": { | |
"AC": "RF01419", | |
"ID": "IsrR", | |
"DE": "Antisense RNA which regulates isiA expression", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Antisense RNA which regulates isiA expression" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01419" | |
} | |
] | |
}, | |
"RF01420": { | |
"AC": "RF01420", | |
"ID": "snoR113", | |
"DE": "Small nucleolar RNA snoR113", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR113" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01420" | |
} | |
] | |
}, | |
"RF01421": { | |
"AC": "RF01421", | |
"ID": "snoR114", | |
"DE": "small nucleolar RNA snoR114", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR114" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01421" | |
} | |
] | |
}, | |
"RF01422": { | |
"AC": "RF01422", | |
"ID": "snoR116", | |
"DE": "small nucleolar RNA snoR116", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR116" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01422" | |
} | |
] | |
}, | |
"RF01423": { | |
"AC": "RF01423", | |
"ID": "snoR117", | |
"DE": "small nucleolar RNA snoR117", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR117" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01423" | |
} | |
] | |
}, | |
"RF01424": { | |
"AC": "RF01424", | |
"ID": "snoR118", | |
"DE": "small nucleolar RNA snoR118", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR118" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01424" | |
} | |
] | |
}, | |
"RF01425": { | |
"AC": "RF01425", | |
"ID": "snoR121", | |
"DE": "small nucleolar RNA snoR121", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR121" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01425" | |
} | |
] | |
}, | |
"RF01426": { | |
"AC": "RF01426", | |
"ID": "snoR126", | |
"DE": "small nucleolar RNA snoR126", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR126" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01426" | |
} | |
] | |
}, | |
"RF01427": { | |
"AC": "RF01427", | |
"ID": "snoR127", | |
"DE": "small nucleolar RNA snoR127", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR127" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01427" | |
} | |
] | |
}, | |
"RF01428": { | |
"AC": "RF01428", | |
"ID": "snoR128", | |
"DE": "small nucleolar RNA snoR128", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR128" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01428" | |
} | |
] | |
}, | |
"RF01429": { | |
"AC": "RF01429", | |
"ID": "snoR130", | |
"DE": "small nucleolar RNA snoR130", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR130" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01429" | |
} | |
] | |
}, | |
"RF01430": { | |
"AC": "RF01430", | |
"ID": "snoR134", | |
"DE": "small nucleolar RNA snoR134", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR134" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01430" | |
} | |
] | |
}, | |
"RF01431": { | |
"AC": "RF01431", | |
"ID": "snoR135", | |
"DE": "small nucleolar RNA snoR135", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR135" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01431" | |
} | |
] | |
}, | |
"RF01432": { | |
"AC": "RF01432", | |
"ID": "snoR143", | |
"DE": "small nucleolar RNA snoR143", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR143" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01432" | |
} | |
] | |
}, | |
"RF01433": { | |
"AC": "RF01433", | |
"ID": "snoR137", | |
"DE": "small nucleolar RNA snoR137", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR137" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01433" | |
} | |
] | |
}, | |
"RF01434": { | |
"AC": "RF01434", | |
"ID": "S_pombe_snR3", | |
"DE": "small nucleolar RNA snR3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01434" | |
} | |
] | |
}, | |
"RF01435": { | |
"AC": "RF01435", | |
"ID": "S_pombe_snR5", | |
"DE": "small nucleolar RNA snR5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01435" | |
} | |
] | |
}, | |
"RF01436": { | |
"AC": "RF01436", | |
"ID": "S_pombe_snR33", | |
"DE": "small nucleolar RNA snR33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01436" | |
} | |
] | |
}, | |
"RF01437": { | |
"AC": "RF01437", | |
"ID": "S_pombe_snR10", | |
"DE": "small nucleolar RNA snR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01437" | |
} | |
] | |
}, | |
"RF01438": { | |
"AC": "RF01438", | |
"ID": "S_pombe_snR35", | |
"DE": "small nucleolar RNA snR35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01438" | |
} | |
] | |
}, | |
"RF01439": { | |
"AC": "RF01439", | |
"ID": "S_pombe_snR36", | |
"DE": "small nucleolar RNA snR36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01439" | |
} | |
] | |
}, | |
"RF01440": { | |
"AC": "RF01440", | |
"ID": "S_pombe_snR42", | |
"DE": "small nucleolar RNA snR42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01440" | |
} | |
] | |
}, | |
"RF01441": { | |
"AC": "RF01441", | |
"ID": "S_pombe_snR46", | |
"DE": "small nulceolar RNA snR46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nulceolar RNA snR46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01441" | |
} | |
] | |
}, | |
"RF01442": { | |
"AC": "RF01442", | |
"ID": "S_pombe_snR90", | |
"DE": "small nucleolar RNA snR90", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR90" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01442" | |
} | |
] | |
}, | |
"RF01443": { | |
"AC": "RF01443", | |
"ID": "S_pombe_snR91", | |
"DE": "small nucleolar RNA snR91", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR91" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01443" | |
} | |
] | |
}, | |
"RF01444": { | |
"AC": "RF01444", | |
"ID": "S_pombe_snR92", | |
"DE": "small nucleolar RNA snR92", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR92" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01444" | |
} | |
] | |
}, | |
"RF01445": { | |
"AC": "RF01445", | |
"ID": "S_pombe_snR94", | |
"DE": "small nucleolar RNA snR94", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR94" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01445" | |
} | |
] | |
}, | |
"RF01446": { | |
"AC": "RF01446", | |
"ID": "S_pombe_snR95", | |
"DE": "small nucleolar RNA snR95", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR95" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01446" | |
} | |
] | |
}, | |
"RF01447": { | |
"AC": "RF01447", | |
"ID": "S_pombe_snR98", | |
"DE": "small nucleolar RNA snR98", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR98" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01447" | |
} | |
] | |
}, | |
"RF01448": { | |
"AC": "RF01448", | |
"ID": "S_pombe_snR93", | |
"DE": "small nucleolar RNA snR93", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR93" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01448" | |
} | |
] | |
}, | |
"RF01449": { | |
"AC": "RF01449", | |
"ID": "S_pombe_snR100", | |
"DE": "small nucleolar RNA snR100", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR100" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01449" | |
} | |
] | |
}, | |
"RF01450": { | |
"AC": "RF01450", | |
"ID": "S_pombe_snR96", | |
"DE": "small nucleolar RNA snR96", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR96" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01450" | |
} | |
] | |
}, | |
"RF01451": { | |
"AC": "RF01451", | |
"ID": "S_pombe_snR97", | |
"DE": "small nucleolar RNA snR97", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR97" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01451" | |
} | |
] | |
}, | |
"RF01452": { | |
"AC": "RF01452", | |
"ID": "S_pombe_snR99", | |
"DE": "small nucleolar RNA snR99", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snR99" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01452" | |
} | |
] | |
}, | |
"RF01453": { | |
"AC": "RF01453", | |
"ID": "RCNMV_TE_DR1", | |
"DE": "3'TE-DR1 translation enhancer element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01453" | |
} | |
] | |
}, | |
"RF01454": { | |
"AC": "RF01454", | |
"ID": "RCNMV_5UTR", | |
"DE": "5'UTR enhancer element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01454" | |
} | |
] | |
}, | |
"RF01455": { | |
"AC": "RF01455", | |
"ID": "DPB", | |
"DE": "Stem loopII regulatory element in POLB", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01455" | |
} | |
] | |
}, | |
"RF01456": { | |
"AC": "RF01456", | |
"ID": "VrrA", | |
"DE": "Vibrio regulatory RNA of OmpA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Vibrio regulatory RNA of OmpA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01456" | |
} | |
] | |
}, | |
"RF01457": { | |
"AC": "RF01457", | |
"ID": "rli22", | |
"DE": "Listeria sRNA rli22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01457" | |
} | |
] | |
}, | |
"RF01458": { | |
"AC": "RF01458", | |
"ID": "rli23", | |
"DE": "Listeria snRNA rli23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Listeria snRNA rli23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01458" | |
} | |
] | |
}, | |
"RF01459": { | |
"AC": "RF01459", | |
"ID": "rliE", | |
"DE": "Listeria sRNA rliE", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliE" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01459" | |
} | |
] | |
}, | |
"RF01460": { | |
"AC": "RF01460", | |
"ID": "rliH", | |
"DE": "Listeria sRNA rliH", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliH" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01460" | |
} | |
] | |
}, | |
"RF01461": { | |
"AC": "RF01461", | |
"ID": "rli24", | |
"DE": "Listeria sRNA rli22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01461" | |
} | |
] | |
}, | |
"RF01462": { | |
"AC": "RF01462", | |
"ID": "rli26", | |
"DE": "Listeria sRNA rli26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01462" | |
} | |
] | |
}, | |
"RF01463": { | |
"AC": "RF01463", | |
"ID": "rli27", | |
"DE": "Listeria sRNA rli27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01463" | |
} | |
] | |
}, | |
"RF01464": { | |
"AC": "RF01464", | |
"ID": "rliA", | |
"DE": "Listeria sRNA rliA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01464" | |
} | |
] | |
}, | |
"RF01465": { | |
"AC": "RF01465", | |
"ID": "rli31", | |
"DE": "Listeria sRNA rli31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01465" | |
} | |
] | |
}, | |
"RF01466": { | |
"AC": "RF01466", | |
"ID": "rli34", | |
"DE": "Listeria sRNA rli34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01466" | |
} | |
] | |
}, | |
"RF01467": { | |
"AC": "RF01467", | |
"ID": "rli36", | |
"DE": "Listeria sRNA rli36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01467" | |
} | |
] | |
}, | |
"RF01468": { | |
"AC": "RF01468", | |
"ID": "rli32", | |
"DE": "Listeria sRNA rli32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01468" | |
} | |
] | |
}, | |
"RF01469": { | |
"AC": "RF01469", | |
"ID": "rli33", | |
"DE": "Listeria sRNA rli33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01469" | |
} | |
] | |
}, | |
"RF01470": { | |
"AC": "RF01470", | |
"ID": "rli38", | |
"DE": "Listeria sRNA rli38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01470" | |
} | |
] | |
}, | |
"RF01471": { | |
"AC": "RF01471", | |
"ID": "rliB", | |
"DE": "Listeria sRNA rliB", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliB" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01471" | |
} | |
] | |
}, | |
"RF01472": { | |
"AC": "RF01472", | |
"ID": "rli40", | |
"DE": "Listeria sRNA rli40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01472" | |
} | |
] | |
}, | |
"RF01473": { | |
"AC": "RF01473", | |
"ID": "rli41", | |
"DE": "Listeria sRNA rli41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01473" | |
} | |
] | |
}, | |
"RF01474": { | |
"AC": "RF01474", | |
"ID": "rli42", | |
"DE": "Listeia sRNA rli42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeia sRNA rli42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01474" | |
} | |
] | |
}, | |
"RF01475": { | |
"AC": "RF01475", | |
"ID": "rli45", | |
"DE": "Listeria snRNA rli45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Listeria snRNA rli45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01475" | |
} | |
] | |
}, | |
"RF01476": { | |
"AC": "RF01476", | |
"ID": "rliF", | |
"DE": "Listeria sRNA rliF", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliF" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01476" | |
} | |
] | |
}, | |
"RF01477": { | |
"AC": "RF01477", | |
"ID": "rli43", | |
"DE": "Listeria sRNA rli43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01477" | |
} | |
] | |
}, | |
"RF01478": { | |
"AC": "RF01478", | |
"ID": "rli47", | |
"DE": "Listeria sRNA rli47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01478" | |
} | |
] | |
}, | |
"RF01479": { | |
"AC": "RF01479", | |
"ID": "rli48", | |
"DE": "Listeria sRNA rli48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01479" | |
} | |
] | |
}, | |
"RF01480": { | |
"AC": "RF01480", | |
"ID": "rli52", | |
"DE": "Listeria sRNA rli52", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01480" | |
} | |
] | |
}, | |
"RF01481": { | |
"AC": "RF01481", | |
"ID": "rli53", | |
"DE": "Listeria sRNA rli53", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01481" | |
} | |
] | |
}, | |
"RF01482": { | |
"AC": "RF01482", | |
"ID": "AdoCbl_riboswitch", | |
"DE": "AdoCbl riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01482" | |
} | |
] | |
}, | |
"RF01483": { | |
"AC": "RF01483", | |
"ID": "rli56", | |
"DE": "Listeria sRNA rli56", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01483" | |
} | |
] | |
}, | |
"RF01484": { | |
"AC": "RF01484", | |
"ID": "rli59", | |
"DE": "Listeria sRNA rli59", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01484" | |
} | |
] | |
}, | |
"RF01485": { | |
"AC": "RF01485", | |
"ID": "rli61", | |
"DE": "Listeria sRNA rli61", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01485" | |
} | |
] | |
}, | |
"RF01486": { | |
"AC": "RF01486", | |
"ID": "rli62", | |
"DE": "Listeria sRNA rli62", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01486" | |
} | |
] | |
}, | |
"RF01487": { | |
"AC": "RF01487", | |
"ID": "rliI", | |
"DE": "Listeria sRNA rliI", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rliI" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01487" | |
} | |
] | |
}, | |
"RF01488": { | |
"AC": "RF01488", | |
"ID": "rli49", | |
"DE": "Listeria sRNA rli49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01488" | |
} | |
] | |
}, | |
"RF01489": { | |
"AC": "RF01489", | |
"ID": "sbrA", | |
"DE": "Listeria sRNA sbrA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA sbrA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01489" | |
} | |
] | |
}, | |
"RF01490": { | |
"AC": "RF01490", | |
"ID": "rli51", | |
"DE": "Listeria snRNA rli51", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01490" | |
} | |
] | |
}, | |
"RF01491": { | |
"AC": "RF01491", | |
"ID": "rli54", | |
"DE": "Listeria sRNA rli54", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01491" | |
} | |
] | |
}, | |
"RF01492": { | |
"AC": "RF01492", | |
"ID": "rli28", | |
"DE": "Listeria sRNA rli28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01492" | |
} | |
] | |
}, | |
"RF01493": { | |
"AC": "RF01493", | |
"ID": "rli37", | |
"DE": "Listeria sRNA rli37", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Listeria sRNA rli37" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01493" | |
} | |
] | |
}, | |
"RF01494": { | |
"AC": "RF01494", | |
"ID": "rliD", | |
"DE": "Listeria sRNA rliD", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Listeria sRNA rliD" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01494" | |
} | |
] | |
}, | |
"RF01495": { | |
"AC": "RF01495", | |
"ID": "ACAT", | |
"DE": "Human acetyl-coA cholesterol acyltransferase mRNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01495" | |
} | |
] | |
}, | |
"RF01496": { | |
"AC": "RF01496", | |
"ID": "Afu_182", | |
"DE": "A. fumigatus sRNA Afu_182", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "A. fumigatus sRNA Afu_182" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01496" | |
} | |
] | |
}, | |
"RF01497": { | |
"AC": "RF01497", | |
"ID": "ALIL", | |
"DE": "ALIL pseudoknot", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01497" | |
} | |
] | |
}, | |
"RF01498": { | |
"AC": "RF01498", | |
"ID": "Afu_190", | |
"DE": "A. fumigatus snoRNA Afu_190", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_190" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01498" | |
} | |
] | |
}, | |
"RF01499": { | |
"AC": "RF01499", | |
"ID": "Afu_191", | |
"DE": "A. fumigatus snoRNA Afu_191", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_191" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01499" | |
} | |
] | |
}, | |
"RF01500": { | |
"AC": "RF01500", | |
"ID": "Afu_198", | |
"DE": "A. fumigatus snoRNA Afu_198", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_198" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01500" | |
} | |
] | |
}, | |
"RF01501": { | |
"AC": "RF01501", | |
"ID": "Afu_199", | |
"DE": "A. fimigatus snoRNA Afu_199", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fimigatus snoRNA Afu_199" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01501" | |
} | |
] | |
}, | |
"RF01502": { | |
"AC": "RF01502", | |
"ID": "Fungi_SRP", | |
"DE": "Fungal signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Fungal signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01502" | |
} | |
] | |
}, | |
"RF01503": { | |
"AC": "RF01503", | |
"ID": "Afu_203", | |
"DE": "A. fumigatus sRNA Afu_203", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "A. fumigatus sRNA Afu_203" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01503" | |
} | |
] | |
}, | |
"RF01504": { | |
"AC": "RF01504", | |
"ID": "Afu_254", | |
"DE": "A. fumigatus sRNA Afu_254", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "A. fumigatus sRNA Afu_254" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01504" | |
} | |
] | |
}, | |
"RF01505": { | |
"AC": "RF01505", | |
"ID": "Afu_264", | |
"DE": "A. fumigatus snoRNA Afu_264", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_264" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01505" | |
} | |
] | |
}, | |
"RF01506": { | |
"AC": "RF01506", | |
"ID": "Afu_294", | |
"DE": "A. fumigatus snoRNA Afu_294", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_294" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01506" | |
} | |
] | |
}, | |
"RF01507": { | |
"AC": "RF01507", | |
"ID": "Afu_298", | |
"DE": "A. fimigatus snoRNA Afu_298", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fimigatus snoRNA Afu_298" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01507" | |
} | |
] | |
}, | |
"RF01508": { | |
"AC": "RF01508", | |
"ID": "BYDV_5_UTR", | |
"DE": "Barley yellow dwarf virus 5'UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01508" | |
} | |
] | |
}, | |
"RF01509": { | |
"AC": "RF01509", | |
"ID": "Afu_300", | |
"DE": "A. fumigatus snoRNA Afu_300", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_300" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01509" | |
} | |
] | |
}, | |
"RF01510": { | |
"AC": "RF01510", | |
"ID": "MFR", | |
"DE": "M. florum riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01510" | |
} | |
] | |
}, | |
"RF01511": { | |
"AC": "RF01511", | |
"ID": "Afu_304", | |
"DE": "A. fumigatus snoRNA Afu_304", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_304" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01511" | |
} | |
] | |
}, | |
"RF01512": { | |
"AC": "RF01512", | |
"ID": "Afu_309", | |
"DE": "A. fumigatus sRNA Afu_309", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "A. fumigatus sRNA Afu_309" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01512" | |
} | |
] | |
}, | |
"RF01513": { | |
"AC": "RF01513", | |
"ID": "Afu_335", | |
"DE": "A. fumigatus snoRNA Afu_335", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_335" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01513" | |
} | |
] | |
}, | |
"RF01514": { | |
"AC": "RF01514", | |
"ID": "Afu_513", | |
"DE": "A. fumigatus snoRNA Afu_513", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_513" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01514" | |
} | |
] | |
}, | |
"RF01515": { | |
"AC": "RF01515", | |
"ID": "Afu_514", | |
"DE": "A. fumigatus snoRNA Afu_514", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_514" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01515" | |
} | |
] | |
}, | |
"RF01516": { | |
"AC": "RF01516", | |
"ID": "v-snoRNA-1", | |
"DE": "Human herpesvirus 1 small nucleolar RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Human herpesvirus 1 small nucleolar RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01516" | |
} | |
] | |
}, | |
"RF01517": { | |
"AC": "RF01517", | |
"ID": "iscRS", | |
"DE": "iscR stability element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01517" | |
} | |
] | |
}, | |
"RF01518": { | |
"AC": "RF01518", | |
"ID": "pRNA", | |
"DE": "NoRC assoicated RNA, pRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "NoRC assoicated RNA, pRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01518" | |
} | |
] | |
}, | |
"RF01519": { | |
"AC": "RF01519", | |
"ID": "CC0196", | |
"DE": "Caulobacter sRNA CC0196", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caulobacter sRNA CC0196" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01519" | |
} | |
] | |
}, | |
"RF01520": { | |
"AC": "RF01520", | |
"ID": "CC0734", | |
"DE": "caulobacter sRNA CC0734", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "caulobacter sRNA CC0734" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01520" | |
} | |
] | |
}, | |
"RF01521": { | |
"AC": "RF01521", | |
"ID": "CC1840", | |
"DE": "caulobacter sRNA CC1840", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "caulobacter sRNA CC1840" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01521" | |
} | |
] | |
}, | |
"RF01522": { | |
"AC": "RF01522", | |
"ID": "TB10Cs1H1", | |
"DE": "Trypanosomatid snoRNA TB10Cs1H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs1H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01522" | |
} | |
] | |
}, | |
"RF01523": { | |
"AC": "RF01523", | |
"ID": "TB10Cs1H2", | |
"DE": "Trypanosomatid snoRNA TB10Cs1H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs1H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01523" | |
} | |
] | |
}, | |
"RF01524": { | |
"AC": "RF01524", | |
"ID": "TB10Cs1H3", | |
"DE": "Trypanosomatid snoRNA TB10cs1H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10cs1H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01524" | |
} | |
] | |
}, | |
"RF01525": { | |
"AC": "RF01525", | |
"ID": "TB10Cs2H1", | |
"DE": "Trypanosomatid snoRNA TB10Cs2H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs2H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01525" | |
} | |
] | |
}, | |
"RF01526": { | |
"AC": "RF01526", | |
"ID": "ceN106", | |
"DE": "C. elegans snoRNA ceN106", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "C. elegans snoRNA ceN106" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01526" | |
} | |
] | |
}, | |
"RF01527": { | |
"AC": "RF01527", | |
"ID": "CrfA", | |
"DE": "Caulobacter sRNA CrfA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caulobacter sRNA CrfA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01527" | |
} | |
] | |
}, | |
"RF01528": { | |
"AC": "RF01528", | |
"ID": "CC3513", | |
"DE": "caulobacter sRNA CC3513", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "caulobacter sRNA CC3513" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01528" | |
} | |
] | |
}, | |
"RF01529": { | |
"AC": "RF01529", | |
"ID": "CC3552", | |
"DE": "Cauldobacter sRNA CC3552", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cauldobacter sRNA CC3552" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01529" | |
} | |
] | |
}, | |
"RF01530": { | |
"AC": "RF01530", | |
"ID": "CC3664", | |
"DE": "Caulobacter sRNA CC3664", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caulobacter sRNA CC3664" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01530" | |
} | |
] | |
}, | |
"RF01531": { | |
"AC": "RF01531", | |
"ID": "TB10Cs3H1", | |
"DE": "Trypanosomatid snoRNA TB10Cs3H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs3H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01531" | |
} | |
] | |
}, | |
"RF01532": { | |
"AC": "RF01532", | |
"ID": "TB10Cs3H2", | |
"DE": "Trypanosomatid snoRNA TB10Cs3H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs3H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01532" | |
} | |
] | |
}, | |
"RF01533": { | |
"AC": "RF01533", | |
"ID": "TB10Cs4H3", | |
"DE": "Trypanosomatid snoRNA TB10Cs4H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs4H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01533" | |
} | |
] | |
}, | |
"RF01534": { | |
"AC": "RF01534", | |
"ID": "TB10Cs4H4", | |
"DE": "Trypanosomatid snoRNA TB10Cs4H4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs4H4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01534" | |
} | |
] | |
}, | |
"RF01535": { | |
"AC": "RF01535", | |
"ID": "TB10Cs5H2", | |
"DE": "Trypanosomatid snoRNA TB10Cs5H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs5H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01535" | |
} | |
] | |
}, | |
"RF01536": { | |
"AC": "RF01536", | |
"ID": "TB10Cs5H3", | |
"DE": "Trypanosomatid snoRNA TB10Cs5H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs5H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01536" | |
} | |
] | |
}, | |
"RF01537": { | |
"AC": "RF01537", | |
"ID": "TB11Cs2H1", | |
"DE": "Trypanosomatid snoRNA TB11Cs2H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs2H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01537" | |
} | |
] | |
}, | |
"RF01538": { | |
"AC": "RF01538", | |
"ID": "TB11Cs3H1", | |
"DE": "Trypanosomatid snoRNA TB11Cs3H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs3H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01538" | |
} | |
] | |
}, | |
"RF01539": { | |
"AC": "RF01539", | |
"ID": "TB11Cs4H1", | |
"DE": "Trypanosomatid snoRNA TB11Cs4H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs4H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01539" | |
} | |
] | |
}, | |
"RF01540": { | |
"AC": "RF01540", | |
"ID": "TB11Cs4H2", | |
"DE": "Trypanosomatid snoRNA TB11Cs4H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs4H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01540" | |
} | |
] | |
}, | |
"RF01541": { | |
"AC": "RF01541", | |
"ID": "TB11Cs4H3", | |
"DE": "Trypanosomatid snoRNA TB11Cs4H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs4H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01541" | |
} | |
] | |
}, | |
"RF01542": { | |
"AC": "RF01542", | |
"ID": "TB11Cs5H1", | |
"DE": "Trypanosomatid snoRNA TB11Cs5H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs5H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01542" | |
} | |
] | |
}, | |
"RF01543": { | |
"AC": "RF01543", | |
"ID": "TB11Cs5H2", | |
"DE": "Trypanosomatid snoRNA TB11Cs5H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs5H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01543" | |
} | |
] | |
}, | |
"RF01544": { | |
"AC": "RF01544", | |
"ID": "TB11Cs5H3", | |
"DE": "Trypanosomatid snoRNA TB11Cs5H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB11Cs5H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01544" | |
} | |
] | |
}, | |
"RF01545": { | |
"AC": "RF01545", | |
"ID": "TB3Cs2H1", | |
"DE": "Trypanosomatid snoRNA TB3Cs2H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB3Cs2H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01545" | |
} | |
] | |
}, | |
"RF01546": { | |
"AC": "RF01546", | |
"ID": "TB6Cs1H1", | |
"DE": "Trypanosomatid snoRNA TB6Cs1H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB6Cs1H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01546" | |
} | |
] | |
}, | |
"RF01547": { | |
"AC": "RF01547", | |
"ID": "TB6Cs1H3", | |
"DE": "Trypanosomatid snoRNA TB6Cs1H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB6Cs1H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01547" | |
} | |
] | |
}, | |
"RF01548": { | |
"AC": "RF01548", | |
"ID": "TB6Cs1H4", | |
"DE": "Trypanosomatid snoRNA TB6Cs1H4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB6Cs1H4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01548" | |
} | |
] | |
}, | |
"RF01549": { | |
"AC": "RF01549", | |
"ID": "TB8Cs2H1", | |
"DE": "Trypanosomatid snoRNA TB8Cs2H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB8Cs2H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01549" | |
} | |
] | |
}, | |
"RF01550": { | |
"AC": "RF01550", | |
"ID": "TB8Cs3H1", | |
"DE": "Trypanosomatid snoRNA TB8Cs3H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB8Cs3H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01550" | |
} | |
] | |
}, | |
"RF01551": { | |
"AC": "RF01551", | |
"ID": "TB8Cs4H2", | |
"DE": "Trypanosomatid snoRNA TB8Cs4H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB8Cs4H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01551" | |
} | |
] | |
}, | |
"RF01552": { | |
"AC": "RF01552", | |
"ID": "TB9Cs1H2", | |
"DE": "Trypanosomatid snoRNA TB9Cs1H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs1H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01552" | |
} | |
] | |
}, | |
"RF01553": { | |
"AC": "RF01553", | |
"ID": "TB9Cs1H3", | |
"DE": "Trypanosomatid snoRNA TB9Cs1H3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs1H3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01553" | |
} | |
] | |
}, | |
"RF01554": { | |
"AC": "RF01554", | |
"ID": "TB9Cs2H1", | |
"DE": "Trypanosomatid snoRNA TB9Cs2H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs2H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01554" | |
} | |
] | |
}, | |
"RF01555": { | |
"AC": "RF01555", | |
"ID": "TB9Cs3H1", | |
"DE": "Trypanosomatid snoRNA TB9Cs3H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs3H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01555" | |
} | |
] | |
}, | |
"RF01556": { | |
"AC": "RF01556", | |
"ID": "TB9Cs3H2", | |
"DE": "Trypanosomatid snoRNA TB9Cs3H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs3H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01556" | |
} | |
] | |
}, | |
"RF01557": { | |
"AC": "RF01557", | |
"ID": "TB9Cs4H1", | |
"DE": "Trypanosomatid snoRNA TB9Cs4H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs4H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01557" | |
} | |
] | |
}, | |
"RF01558": { | |
"AC": "RF01558", | |
"ID": "TB9Cs4H2", | |
"DE": "Trypanosomatid snoRNA TB9Cs4H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs4H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01558" | |
} | |
] | |
}, | |
"RF01559": { | |
"AC": "RF01559", | |
"ID": "DdR1", | |
"DE": "Dictyostelium snoRNA DdR1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01559" | |
} | |
] | |
}, | |
"RF01560": { | |
"AC": "RF01560", | |
"ID": "DdR10", | |
"DE": "Dictyostelium snoRNA DdR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01560" | |
} | |
] | |
}, | |
"RF01561": { | |
"AC": "RF01561", | |
"ID": "DdR11", | |
"DE": "Dictyostelium snoRNA DdR11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01561" | |
} | |
] | |
}, | |
"RF01562": { | |
"AC": "RF01562", | |
"ID": "DdR12", | |
"DE": "D. discoideum snoRNA DdR12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "D. discoideum snoRNA DdR12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01562" | |
} | |
] | |
}, | |
"RF01563": { | |
"AC": "RF01563", | |
"ID": "DdR13", | |
"DE": "Dictyostelium snoRNA DdR13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01563" | |
} | |
] | |
}, | |
"RF01564": { | |
"AC": "RF01564", | |
"ID": "DdR14", | |
"DE": "D. discoideum snoRNA DdR14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "D. discoideum snoRNA DdR14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01564" | |
} | |
] | |
}, | |
"RF01565": { | |
"AC": "RF01565", | |
"ID": "DdR15", | |
"DE": "Dictyostelium snoRNA DdR15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01565" | |
} | |
] | |
}, | |
"RF01566": { | |
"AC": "RF01566", | |
"ID": "DdR16", | |
"DE": "Dictyostelium snoRNA DdR16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01566" | |
} | |
] | |
}, | |
"RF01567": { | |
"AC": "RF01567", | |
"ID": "DdR17", | |
"DE": "D. discoideum snoRNA DdR17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "D. discoideum snoRNA DdR17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01567" | |
} | |
] | |
}, | |
"RF01568": { | |
"AC": "RF01568", | |
"ID": "DdR18", | |
"DE": "Dictyostelium snoRNA DdR18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01568" | |
} | |
] | |
}, | |
"RF01569": { | |
"AC": "RF01569", | |
"ID": "DdR2", | |
"DE": "Dictyostelium snoRNA DdR2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01569" | |
} | |
] | |
}, | |
"RF01570": { | |
"AC": "RF01570", | |
"ID": "Dictyostelium_SRP", | |
"DE": "Dictyostelium signal recognition particle", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "Dictyostelium signal recognition particle" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01570" | |
} | |
] | |
}, | |
"RF01571": { | |
"AC": "RF01571", | |
"ID": "DdR35", | |
"DE": "D. discoideum class II sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "D. discoideum class II sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01571" | |
} | |
] | |
}, | |
"RF01572": { | |
"AC": "RF01572", | |
"ID": "DdR4", | |
"DE": "Dictyostelium snoRNA DdR4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01572" | |
} | |
] | |
}, | |
"RF01573": { | |
"AC": "RF01573", | |
"ID": "DdR5", | |
"DE": "Dictyostelium snoRNA DdR5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01573" | |
} | |
] | |
}, | |
"RF01574": { | |
"AC": "RF01574", | |
"ID": "DdR6", | |
"DE": "Dictyostelium snoRNA DdR6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA DdR6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01574" | |
} | |
] | |
}, | |
"RF01575": { | |
"AC": "RF01575", | |
"ID": "DdR7", | |
"DE": "Dictyostelium snoRNA Dd7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Dictyostelium snoRNA Dd7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01575" | |
} | |
] | |
}, | |
"RF01576": { | |
"AC": "RF01576", | |
"ID": "DdR8", | |
"DE": "D. discoideum snoRNA DdR8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "D. discoideum snoRNA DdR8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01576" | |
} | |
] | |
}, | |
"RF01577": { | |
"AC": "RF01577", | |
"ID": "RNase_P", | |
"DE": "Plasmodium RNase_P", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Plasmodium RNase_P" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01577" | |
} | |
] | |
}, | |
"RF01578": { | |
"AC": "RF01578", | |
"ID": "RUF1", | |
"DE": "Plasmodium RNA of unkown function RUF1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmodium RNA of unkown function RUF1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01578" | |
} | |
] | |
}, | |
"RF01579": { | |
"AC": "RF01579", | |
"ID": "RUF2", | |
"DE": "Plasmodium RNA of unknown function RUF2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmodium RNA of unknown function RUF2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01579" | |
} | |
] | |
}, | |
"RF01580": { | |
"AC": "RF01580", | |
"ID": "RUF3", | |
"DE": "Plasmodium RNA of unkown function RU6-F3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmodium RNA of unkown function RU6-F3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01580" | |
} | |
] | |
}, | |
"RF01581": { | |
"AC": "RF01581", | |
"ID": "RUF6-5", | |
"DE": "Plasmodium RNA of unknown function RUF6-5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmodium RNA of unknown function RUF6-5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01581" | |
} | |
] | |
}, | |
"RF01582": { | |
"AC": "RF01582", | |
"ID": "RUF4", | |
"DE": "RNA of unknown function RUF4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA of unknown function RUF4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01582" | |
} | |
] | |
}, | |
"RF01583": { | |
"AC": "RF01583", | |
"ID": "snoR01", | |
"DE": "small nucleolar RNA snoR01", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR01" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01583" | |
} | |
] | |
}, | |
"RF01584": { | |
"AC": "RF01584", | |
"ID": "snoR03", | |
"DE": "small nucleolar RNA snoR03", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR03" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01584" | |
} | |
] | |
}, | |
"RF01585": { | |
"AC": "RF01585", | |
"ID": "snoR07", | |
"DE": "small nucleolar RNA snoR07", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR07" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01585" | |
} | |
] | |
}, | |
"RF01586": { | |
"AC": "RF01586", | |
"ID": "snoR09", | |
"DE": "small nucleolar RNA snoR09", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR09" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01586" | |
} | |
] | |
}, | |
"RF01587": { | |
"AC": "RF01587", | |
"ID": "snoR10", | |
"DE": "small nucleolar RNA snoR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01587" | |
} | |
] | |
}, | |
"RF01588": { | |
"AC": "RF01588", | |
"ID": "snoR13", | |
"DE": "small nucleolar RNA snoR13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01588" | |
} | |
] | |
}, | |
"RF01589": { | |
"AC": "RF01589", | |
"ID": "plasmodium_snoR11", | |
"DE": "small nucleolar RNA snoR11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01589" | |
} | |
] | |
}, | |
"RF01590": { | |
"AC": "RF01590", | |
"ID": "plasmodium_snoR14", | |
"DE": "small nucleolar RNA snoR14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01590" | |
} | |
] | |
}, | |
"RF01591": { | |
"AC": "RF01591", | |
"ID": "snoR15", | |
"DE": "small nucleolar RNA snoR15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01591" | |
} | |
] | |
}, | |
"RF01592": { | |
"AC": "RF01592", | |
"ID": "plasmodium_snoR17", | |
"DE": "small nucleolar RNA snoR17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01592" | |
} | |
] | |
}, | |
"RF01593": { | |
"AC": "RF01593", | |
"ID": "plasmodium_snoR16", | |
"DE": "small nucleolar RNA snoR16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01593" | |
} | |
] | |
}, | |
"RF01594": { | |
"AC": "RF01594", | |
"ID": "snoR18", | |
"DE": "small nucleolar RNA snoR18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01594" | |
} | |
] | |
}, | |
"RF01595": { | |
"AC": "RF01595", | |
"ID": "snoR19", | |
"DE": "small nucleolar RNA snoR19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01595" | |
} | |
] | |
}, | |
"RF01596": { | |
"AC": "RF01596", | |
"ID": "plasmodium_snoR20", | |
"DE": "small nucleolar RNA snoR20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01596" | |
} | |
] | |
}, | |
"RF01597": { | |
"AC": "RF01597", | |
"ID": "snoR22", | |
"DE": "small nucleolar RNA snoR22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01597" | |
} | |
] | |
}, | |
"RF01598": { | |
"AC": "RF01598", | |
"ID": "snoR23", | |
"DE": "small nucleolar RNA snoR23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01598" | |
} | |
] | |
}, | |
"RF01599": { | |
"AC": "RF01599", | |
"ID": "plasmodium_snoR24", | |
"DE": "small nucleolar RNA snoR24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01599" | |
} | |
] | |
}, | |
"RF01600": { | |
"AC": "RF01600", | |
"ID": "snoR25", | |
"DE": "small nucleolar RNA snoR25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01600" | |
} | |
] | |
}, | |
"RF01601": { | |
"AC": "RF01601", | |
"ID": "plasmodium_snoR26", | |
"DE": "small nucleolar RNA snoR26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01601" | |
} | |
] | |
}, | |
"RF01602": { | |
"AC": "RF01602", | |
"ID": "plasmodium_snoR27", | |
"DE": "small nucleolar RNA snoR27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01602" | |
} | |
] | |
}, | |
"RF01603": { | |
"AC": "RF01603", | |
"ID": "snoR29", | |
"DE": "small nucleolar RNA snoR29", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR29" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01603" | |
} | |
] | |
}, | |
"RF01604": { | |
"AC": "RF01604", | |
"ID": "plasmodium_snoR28", | |
"DE": "small nucleolar RNA snoR28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01604" | |
} | |
] | |
}, | |
"RF01605": { | |
"AC": "RF01605", | |
"ID": "plasmodium_snoR30", | |
"DE": "small nucleolar RNA snoR30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01605" | |
} | |
] | |
}, | |
"RF01606": { | |
"AC": "RF01606", | |
"ID": "plasmodium_snoR31", | |
"DE": "small nucleolar RNA snoR31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01606" | |
} | |
] | |
}, | |
"RF01607": { | |
"AC": "RF01607", | |
"ID": "ceN100", | |
"DE": "C. elegans snoRNA ceN100", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "C. elegans snoRNA ceN100" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01607" | |
} | |
] | |
}, | |
"RF01608": { | |
"AC": "RF01608", | |
"ID": "ceN102", | |
"DE": "Caenorhabditis snoRNA ceN80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01608" | |
} | |
] | |
}, | |
"RF01609": { | |
"AC": "RF01609", | |
"ID": "ceN103", | |
"DE": "Caenorhabditis snoRNA ceN103", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN103" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01609" | |
} | |
] | |
}, | |
"RF01610": { | |
"AC": "RF01610", | |
"ID": "ceN104", | |
"DE": "Caenorhabditis snoRNA ceN104", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN104" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01610" | |
} | |
] | |
}, | |
"RF01611": { | |
"AC": "RF01611", | |
"ID": "ceN108", | |
"DE": "Caenorhabditis snoRNA ceN108", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN108" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01611" | |
} | |
] | |
}, | |
"RF01612": { | |
"AC": "RF01612", | |
"ID": "ceN105", | |
"DE": "Nematode snoRNA ceN105", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN105" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01612" | |
} | |
] | |
}, | |
"RF01613": { | |
"AC": "RF01613", | |
"ID": "ceN109", | |
"DE": "Nematode snoRNA ceN109", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN109" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01613" | |
} | |
] | |
}, | |
"RF01614": { | |
"AC": "RF01614", | |
"ID": "ceN110", | |
"DE": "Caenorhabditis snoRNA ceN110", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN110" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01614" | |
} | |
] | |
}, | |
"RF01615": { | |
"AC": "RF01615", | |
"ID": "ceN111", | |
"DE": "Nematode snoRNA ceN111", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN111" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01615" | |
} | |
] | |
}, | |
"RF01617": { | |
"AC": "RF01617", | |
"ID": "ceN113", | |
"DE": "Caenorhabditis snoRNA ceN113", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN113" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01617" | |
} | |
] | |
}, | |
"RF01618": { | |
"AC": "RF01618", | |
"ID": "ceN114", | |
"DE": "Nematode snoRNA ceN114", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN114" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01618" | |
} | |
] | |
}, | |
"RF01619": { | |
"AC": "RF01619", | |
"ID": "ceN115", | |
"DE": "C. elegans sRNA ceN115", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "C. elegans sRNA ceN115" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01619" | |
} | |
] | |
}, | |
"RF01620": { | |
"AC": "RF01620", | |
"ID": "ceN125", | |
"DE": "Nematode snoRNA ceN125", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN125" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01620" | |
} | |
] | |
}, | |
"RF01621": { | |
"AC": "RF01621", | |
"ID": "ceN126", | |
"DE": "Caenorhabditis snoRNA ceN126", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN126" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01621" | |
} | |
] | |
}, | |
"RF01622": { | |
"AC": "RF01622", | |
"ID": "ceN22", | |
"DE": "Nematode snoRNA ceN22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01622" | |
} | |
] | |
}, | |
"RF01623": { | |
"AC": "RF01623", | |
"ID": "ceN23-1", | |
"DE": "Caenorhabditis sRNA ceN23-1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caenorhabditis sRNA ceN23-1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01623" | |
} | |
] | |
}, | |
"RF01624": { | |
"AC": "RF01624", | |
"ID": "ceN27", | |
"DE": "Nematode snoRNA ceN27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01624" | |
} | |
] | |
}, | |
"RF01625": { | |
"AC": "RF01625", | |
"ID": "ceN28", | |
"DE": "Caenorhabditis snoRNA ceN28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01625" | |
} | |
] | |
}, | |
"RF01626": { | |
"AC": "RF01626", | |
"ID": "ceN30", | |
"DE": "Caenorhabditis snoRNA ceN30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01626" | |
} | |
] | |
}, | |
"RF01627": { | |
"AC": "RF01627", | |
"ID": "ceN36-1", | |
"DE": "Nematode snoRNA ceN36-1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN36-1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01627" | |
} | |
] | |
}, | |
"RF01628": { | |
"AC": "RF01628", | |
"ID": "ceN38", | |
"DE": "Caenorhabditis snoRNA ceN38", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN38" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01628" | |
} | |
] | |
}, | |
"RF01629": { | |
"AC": "RF01629", | |
"ID": "ceN39", | |
"DE": "Nematode snoRNA ceN39", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN39" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01629" | |
} | |
] | |
}, | |
"RF01630": { | |
"AC": "RF01630", | |
"ID": "ceN40", | |
"DE": "Nematode snoRNA ceN40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01630" | |
} | |
] | |
}, | |
"RF01631": { | |
"AC": "RF01631", | |
"ID": "ceN41", | |
"DE": "Caenorhabditis snoRNA ceN41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01631" | |
} | |
] | |
}, | |
"RF01632": { | |
"AC": "RF01632", | |
"ID": "ceN42", | |
"DE": "Caenorhabditis snoRNA ceN42", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN42" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01632" | |
} | |
] | |
}, | |
"RF01633": { | |
"AC": "RF01633", | |
"ID": "ceN43", | |
"DE": "Caenorhabditis snoRNA ceN43", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN43" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01633" | |
} | |
] | |
}, | |
"RF01634": { | |
"AC": "RF01634", | |
"ID": "ceN44", | |
"DE": "Caenorhabditis snoRNA ceN44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01634" | |
} | |
] | |
}, | |
"RF01635": { | |
"AC": "RF01635", | |
"ID": "ceN45", | |
"DE": "Caenorhabditis snoRNA ceN45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01635" | |
} | |
] | |
}, | |
"RF01636": { | |
"AC": "RF01636", | |
"ID": "ceN46", | |
"DE": "Caenorhabditis snoRNA ceN46", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN46" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01636" | |
} | |
] | |
}, | |
"RF01637": { | |
"AC": "RF01637", | |
"ID": "ceN47", | |
"DE": "Nematode snoRNA ceN47", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN47" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01637" | |
} | |
] | |
}, | |
"RF01638": { | |
"AC": "RF01638", | |
"ID": "ceN48", | |
"DE": "Caenorhabditis snoRNA ceN48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01638" | |
} | |
] | |
}, | |
"RF01639": { | |
"AC": "RF01639", | |
"ID": "ceN49", | |
"DE": "Caenorhabditis snoRNA ceN49", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN49" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01639" | |
} | |
] | |
}, | |
"RF01640": { | |
"AC": "RF01640", | |
"ID": "ceN51", | |
"DE": "Caenorhabditis snoRNA ceN51", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN51" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01640" | |
} | |
] | |
}, | |
"RF01641": { | |
"AC": "RF01641", | |
"ID": "ceN53", | |
"DE": "Caenorhabditis snoRNA ceN53", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN53" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01641" | |
} | |
] | |
}, | |
"RF01642": { | |
"AC": "RF01642", | |
"ID": "ceN54", | |
"DE": "Caenorhabditis snoRNA ceN54", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN54" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01642" | |
} | |
] | |
}, | |
"RF01643": { | |
"AC": "RF01643", | |
"ID": "ceN56", | |
"DE": "Caenorhabditis sRNA ceN56", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caenorhabditis sRNA ceN56" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01643" | |
} | |
] | |
}, | |
"RF01644": { | |
"AC": "RF01644", | |
"ID": "ceN59", | |
"DE": "Caenorhabditis snoRNA ceN59", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN59" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01644" | |
} | |
] | |
}, | |
"RF01645": { | |
"AC": "RF01645", | |
"ID": "ceN58", | |
"DE": "Nematode snoRNA ceN58", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN58" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01645" | |
} | |
] | |
}, | |
"RF01646": { | |
"AC": "RF01646", | |
"ID": "ceN63", | |
"DE": "Caenorhabditis snoRNA ceN63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01646" | |
} | |
] | |
}, | |
"RF01647": { | |
"AC": "RF01647", | |
"ID": "ceN61", | |
"DE": "Caenorhabditis snoRNA ceN61", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN61" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01647" | |
} | |
] | |
}, | |
"RF01648": { | |
"AC": "RF01648", | |
"ID": "ceN65", | |
"DE": "Caenorhabditis snoRNA ceN65", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN65" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01648" | |
} | |
] | |
}, | |
"RF01649": { | |
"AC": "RF01649", | |
"ID": "ceN67", | |
"DE": "Caenorhabditis snoRNA ceN67", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN67" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01649" | |
} | |
] | |
}, | |
"RF01650": { | |
"AC": "RF01650", | |
"ID": "ceN68", | |
"DE": "Caenorhabditis snoRNA ceN48", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN48" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01650" | |
} | |
] | |
}, | |
"RF01651": { | |
"AC": "RF01651", | |
"ID": "ceN69", | |
"DE": "Caenorhabditis snoRNA ceN69", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN69" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01651" | |
} | |
] | |
}, | |
"RF01652": { | |
"AC": "RF01652", | |
"ID": "ceN70", | |
"DE": "Caenorhabditis snoRNA ceN70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01652" | |
} | |
] | |
}, | |
"RF01653": { | |
"AC": "RF01653", | |
"ID": "ceN80", | |
"DE": "Caenorhabditis snoRNA ceN80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01653" | |
} | |
] | |
}, | |
"RF01654": { | |
"AC": "RF01654", | |
"ID": "ceN82", | |
"DE": "Caenorhabditis snoRNA ceN82", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN82" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01654" | |
} | |
] | |
}, | |
"RF01655": { | |
"AC": "RF01655", | |
"ID": "ceN84", | |
"DE": "Caenorhabditis snoRNA ceN84", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN84" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01655" | |
} | |
] | |
}, | |
"RF01656": { | |
"AC": "RF01656", | |
"ID": "ceN72-3_ceN74-2", | |
"DE": "Nematode sRNA ceN72-3_ceN74-2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Nematode sRNA ceN72-3_ceN74-2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01656" | |
} | |
] | |
}, | |
"RF01658": { | |
"AC": "RF01658", | |
"ID": "ceN81", | |
"DE": "Caenorhabditis snoRNA ceN81", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN81" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01658" | |
} | |
] | |
}, | |
"RF01659": { | |
"AC": "RF01659", | |
"ID": "ceN86", | |
"DE": "Caenorhabditis snoRNA ceN86", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN86" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01659" | |
} | |
] | |
}, | |
"RF01660": { | |
"AC": "RF01660", | |
"ID": "ceN88", | |
"DE": "Nematode snoRNA ceN88", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Nematode snoRNA ceN88" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01660" | |
} | |
] | |
}, | |
"RF01661": { | |
"AC": "RF01661", | |
"ID": "ceN92", | |
"DE": "Caenorhabditis snoRNA ceN92", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN92" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01661" | |
} | |
] | |
}, | |
"RF01662": { | |
"AC": "RF01662", | |
"ID": "ceN89", | |
"DE": "Caenorhabditis snoRNA ceN89", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN89" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01662" | |
} | |
] | |
}, | |
"RF01663": { | |
"AC": "RF01663", | |
"ID": "ceN93", | |
"DE": "Caenorhabditis sRNA ceN93", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Caenorhabditis sRNA ceN93" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01663" | |
} | |
] | |
}, | |
"RF01664": { | |
"AC": "RF01664", | |
"ID": "ceN101", | |
"DE": "Caenorhabditis snoRNA ceN101", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Caenorhabditis snoRNA ceN101" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01664" | |
} | |
] | |
}, | |
"RF01665": { | |
"AC": "RF01665", | |
"ID": "P13", | |
"DE": "Pseudomonas sRNA P13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01665" | |
} | |
] | |
}, | |
"RF01666": { | |
"AC": "RF01666", | |
"ID": "rox2", | |
"DE": "Drosophila rox2 ncRNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01666" | |
} | |
] | |
}, | |
"RF01667": { | |
"AC": "RF01667", | |
"ID": "rox1", | |
"DE": "Drosophila rox1 ncRNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01667" | |
} | |
] | |
}, | |
"RF01668": { | |
"AC": "RF01668", | |
"ID": "P10", | |
"DE": "Pseudomonas sRNA P10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01668" | |
} | |
] | |
}, | |
"RF01669": { | |
"AC": "RF01669", | |
"ID": "P14", | |
"DE": "Pseudomonas sRNA P14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01669" | |
} | |
] | |
}, | |
"RF01670": { | |
"AC": "RF01670", | |
"ID": "P17", | |
"DE": "Pseudomonas sRNA P17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01670" | |
} | |
] | |
}, | |
"RF01671": { | |
"AC": "RF01671", | |
"ID": "P18", | |
"DE": "Pseudomonas sRNA P18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01671" | |
} | |
] | |
}, | |
"RF01672": { | |
"AC": "RF01672", | |
"ID": "P2", | |
"DE": "Psudomonas sRNA P2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Psudomonas sRNA P2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01672" | |
} | |
] | |
}, | |
"RF01673": { | |
"AC": "RF01673", | |
"ID": "PhrS", | |
"DE": "PhrS", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "PhrS" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01673" | |
} | |
] | |
}, | |
"RF01674": { | |
"AC": "RF01674", | |
"ID": "P27", | |
"DE": "Pseudomonas sRNA P27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01674" | |
} | |
] | |
}, | |
"RF01675": { | |
"AC": "RF01675", | |
"ID": "CrcZ", | |
"DE": "Pseudomonas sRNA CrcZ", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA CrcZ" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01675" | |
} | |
] | |
}, | |
"RF01676": { | |
"AC": "RF01676", | |
"ID": "P31", | |
"DE": "Pseudomonas sRNA P31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01676" | |
} | |
] | |
}, | |
"RF01677": { | |
"AC": "RF01677", | |
"ID": "P35", | |
"DE": "Pseudomonas sRNA P35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01677" | |
} | |
] | |
}, | |
"RF01678": { | |
"AC": "RF01678", | |
"ID": "P37", | |
"DE": "Pseudomonas sRNA P37", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P37" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01678" | |
} | |
] | |
}, | |
"RF01679": { | |
"AC": "RF01679", | |
"ID": "P36", | |
"DE": "Pseudomonas sRNA P36", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P36" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01679" | |
} | |
] | |
}, | |
"RF01680": { | |
"AC": "RF01680", | |
"ID": "P5", | |
"DE": "Pseudomonas sRNA P5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01680" | |
} | |
] | |
}, | |
"RF01681": { | |
"AC": "RF01681", | |
"ID": "P4", | |
"DE": "Pseudomonas sRNA P4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01681" | |
} | |
] | |
}, | |
"RF01682": { | |
"AC": "RF01682", | |
"ID": "P8", | |
"DE": "Pseudomonas sRNA P8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01682" | |
} | |
] | |
}, | |
"RF01683": { | |
"AC": "RF01683", | |
"ID": "P6", | |
"DE": "Pseudomonas sRNA P6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01683" | |
} | |
] | |
}, | |
"RF01684": { | |
"AC": "RF01684", | |
"ID": "mascRNA-menRNA", | |
"DE": "MALAT1-associated small cytoplasmic RNA/MEN beta RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "MALAT1-associated small cytoplasmic RNA/MEN beta RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01684" | |
} | |
] | |
}, | |
"RF01685": { | |
"AC": "RF01685", | |
"ID": "6S-Flavo", | |
"DE": "6S-Flavo RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "6S-Flavo RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01685" | |
} | |
] | |
}, | |
"RF01686": { | |
"AC": "RF01686", | |
"ID": "Acido-1", | |
"DE": "Acido-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Acido-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01686" | |
} | |
] | |
}, | |
"RF01687": { | |
"AC": "RF01687", | |
"ID": "Acido-Lenti-1", | |
"DE": "Acido-Lenti-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Acido-Lenti-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01687" | |
} | |
] | |
}, | |
"RF01688": { | |
"AC": "RF01688", | |
"ID": "Actino-pnp", | |
"DE": "Actino-pnp RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01688" | |
} | |
] | |
}, | |
"RF01689": { | |
"AC": "RF01689", | |
"ID": "AdoCbl-variant", | |
"DE": "AdoCbl variant RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01689" | |
} | |
] | |
}, | |
"RF01690": { | |
"AC": "RF01690", | |
"ID": "Bacillaceae-1", | |
"DE": "Bacillaceae-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bacillaceae-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01690" | |
} | |
] | |
}, | |
"RF01691": { | |
"AC": "RF01691", | |
"ID": "Bacillus-plasmid", | |
"DE": "Bacillus-plasmid RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bacillus-plasmid RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01691" | |
} | |
] | |
}, | |
"RF01692": { | |
"AC": "RF01692", | |
"ID": "Bacteroid-trp", | |
"DE": "Bacteroidete tryptophan peptide leader RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01692" | |
} | |
] | |
}, | |
"RF01693": { | |
"AC": "RF01693", | |
"ID": "Bacteroidales-1", | |
"DE": "Bacteroidales-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bacteroidales-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01693" | |
} | |
] | |
}, | |
"RF01694": { | |
"AC": "RF01694", | |
"ID": "Bacteroides-1", | |
"DE": "Bacteroides-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bacteroides-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01694" | |
} | |
] | |
}, | |
"RF01695": { | |
"AC": "RF01695", | |
"ID": "C4", | |
"DE": "C4 antisense RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "C4 antisense RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01695" | |
} | |
] | |
}, | |
"RF01696": { | |
"AC": "RF01696", | |
"ID": "Chlorobi-1", | |
"DE": "Chlorobi-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Chlorobi-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01696" | |
} | |
] | |
}, | |
"RF01697": { | |
"AC": "RF01697", | |
"ID": "Chlorobi-RRM", | |
"DE": "Chlorobi-RRM RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01697" | |
} | |
] | |
}, | |
"RF01698": { | |
"AC": "RF01698", | |
"ID": "Chloroflexi-1", | |
"DE": "Chloroflexi-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Chloroflexi-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01698" | |
} | |
] | |
}, | |
"RF01699": { | |
"AC": "RF01699", | |
"ID": "Clostridiales-1", | |
"DE": "Clostridiales-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Clostridiales-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01699" | |
} | |
] | |
}, | |
"RF01700": { | |
"AC": "RF01700", | |
"ID": "Collinsella-1", | |
"DE": "Collinsella-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Collinsella-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01700" | |
} | |
] | |
}, | |
"RF01701": { | |
"AC": "RF01701", | |
"ID": "Cyano-1", | |
"DE": "Cyano-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyano-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01701" | |
} | |
] | |
}, | |
"RF01702": { | |
"AC": "RF01702", | |
"ID": "Cyano-2", | |
"DE": "Cyano-2 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyano-2 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01702" | |
} | |
] | |
}, | |
"RF01703": { | |
"AC": "RF01703", | |
"ID": "Dictyoglomi-1", | |
"DE": "Dictyoglomi-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Dictyoglomi-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01703" | |
} | |
] | |
}, | |
"RF01704": { | |
"AC": "RF01704", | |
"ID": "Downstream-peptide", | |
"DE": "Downstream peptide RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01704" | |
} | |
] | |
}, | |
"RF01705": { | |
"AC": "RF01705", | |
"ID": "Flavo-1", | |
"DE": "Flavo-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Flavo-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01705" | |
} | |
] | |
}, | |
"RF01706": { | |
"AC": "RF01706", | |
"ID": "Gut-1", | |
"DE": "Gut-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Gut-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01706" | |
} | |
] | |
}, | |
"RF01707": { | |
"AC": "RF01707", | |
"ID": "JUMPstart", | |
"DE": "JUMPstart RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01707" | |
} | |
] | |
}, | |
"RF01708": { | |
"AC": "RF01708", | |
"ID": "L17DE", | |
"DE": "L17 ribosomal protein downstream element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01708" | |
} | |
] | |
}, | |
"RF01709": { | |
"AC": "RF01709", | |
"ID": "Lacto-rpoB", | |
"DE": "Lacto-rpoB RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01709" | |
} | |
] | |
}, | |
"RF01710": { | |
"AC": "RF01710", | |
"ID": "Lacto-usp", | |
"DE": "Lacto-usp RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Lacto-usp RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01710" | |
} | |
] | |
}, | |
"RF01711": { | |
"AC": "RF01711", | |
"ID": "Lnt", | |
"DE": "Lnt RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01711" | |
} | |
] | |
}, | |
"RF01712": { | |
"AC": "RF01712", | |
"ID": "Methylobacterium-1", | |
"DE": "Methylobacterium-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Methylobacterium-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01712" | |
} | |
] | |
}, | |
"RF01713": { | |
"AC": "RF01713", | |
"ID": "Moco-II", | |
"DE": "Moco-II RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01713" | |
} | |
] | |
}, | |
"RF01714": { | |
"AC": "RF01714", | |
"ID": "Ocean-V", | |
"DE": "Ocean-V RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Ocean-V RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01714" | |
} | |
] | |
}, | |
"RF01715": { | |
"AC": "RF01715", | |
"ID": "Pedo-repair", | |
"DE": "Pedo-repair RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01715" | |
} | |
] | |
}, | |
"RF01716": { | |
"AC": "RF01716", | |
"ID": "PhotoRC-I", | |
"DE": "PhotoRC-I RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01716" | |
} | |
] | |
}, | |
"RF01717": { | |
"AC": "RF01717", | |
"ID": "PhotoRC-II", | |
"DE": "PhotoRC-II RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01717" | |
} | |
] | |
}, | |
"RF01718": { | |
"AC": "RF01718", | |
"ID": "Polynucleobacter-1", | |
"DE": "Polynucleobacter-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Polynucleobacter-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01718" | |
} | |
] | |
}, | |
"RF01719": { | |
"AC": "RF01719", | |
"ID": "Pseudomon-1", | |
"DE": "Pseudomon-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomon-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01719" | |
} | |
] | |
}, | |
"RF01720": { | |
"AC": "RF01720", | |
"ID": "Pseudomon-Rho", | |
"DE": "Pseudomon-Rho RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01720" | |
} | |
] | |
}, | |
"RF01721": { | |
"AC": "RF01721", | |
"ID": "Pseudomon-groES", | |
"DE": "Pseudomon-groES RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01721" | |
} | |
] | |
}, | |
"RF01722": { | |
"AC": "RF01722", | |
"ID": "Pyrobac-1", | |
"DE": "Pyrobac-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pyrobac-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01722" | |
} | |
] | |
}, | |
"RF01723": { | |
"AC": "RF01723", | |
"ID": "Rhizobiales-2", | |
"DE": "Rhizobiales-2 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Rhizobiales-2 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01723" | |
} | |
] | |
}, | |
"RF01724": { | |
"AC": "RF01724", | |
"ID": "SAM-Chlorobi", | |
"DE": "SAM-Chlorobi RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01724" | |
} | |
] | |
}, | |
"RF01725": { | |
"AC": "RF01725", | |
"ID": "SAM-I-IV-variant", | |
"DE": "SAM-I/IV variant riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01725" | |
} | |
] | |
}, | |
"RF01726": { | |
"AC": "RF01726", | |
"ID": "SAM-II_long_loops", | |
"DE": "SAM-II long loop", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01726" | |
} | |
] | |
}, | |
"RF01727": { | |
"AC": "RF01727", | |
"ID": "SAM-SAH", | |
"DE": "SAM/SAH riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01727" | |
} | |
] | |
}, | |
"RF01728": { | |
"AC": "RF01728", | |
"ID": "STAXI", | |
"DE": "STAXI RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "STAXI RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01728" | |
} | |
] | |
}, | |
"RF01729": { | |
"AC": "RF01729", | |
"ID": "Termite-flg", | |
"DE": "Termite-flg RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01729" | |
} | |
] | |
}, | |
"RF01730": { | |
"AC": "RF01730", | |
"ID": "Termite-leu", | |
"DE": "Termite-leu RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01730" | |
} | |
] | |
}, | |
"RF01731": { | |
"AC": "RF01731", | |
"ID": "TwoAYGGAY", | |
"DE": "TwoAYGGAY RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01731" | |
} | |
] | |
}, | |
"RF01732": { | |
"AC": "RF01732", | |
"ID": "asd", | |
"DE": "asd RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "asd RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01732" | |
} | |
] | |
}, | |
"RF01733": { | |
"AC": "RF01733", | |
"ID": "atoC", | |
"DE": "atoC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01733" | |
} | |
] | |
}, | |
"RF01734": { | |
"AC": "RF01734", | |
"ID": "crcB", | |
"DE": "crcB RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01734" | |
} | |
] | |
}, | |
"RF01735": { | |
"AC": "RF01735", | |
"ID": "epsC", | |
"DE": "epsC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01735" | |
} | |
] | |
}, | |
"RF01736": { | |
"AC": "RF01736", | |
"ID": "flg-Rhizobiales", | |
"DE": "flg-Rhizobiales RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01736" | |
} | |
] | |
}, | |
"RF01737": { | |
"AC": "RF01737", | |
"ID": "flpD", | |
"DE": "flpD RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01737" | |
} | |
] | |
}, | |
"RF01738": { | |
"AC": "RF01738", | |
"ID": "gabT", | |
"DE": "gabT RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01738" | |
} | |
] | |
}, | |
"RF01739": { | |
"AC": "RF01739", | |
"ID": "glnA", | |
"DE": "glnA RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01739" | |
} | |
] | |
}, | |
"RF01740": { | |
"AC": "RF01740", | |
"ID": "gyrA", | |
"DE": "gyrA RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01740" | |
} | |
] | |
}, | |
"RF01741": { | |
"AC": "RF01741", | |
"ID": "hopC", | |
"DE": "hopC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01741" | |
} | |
] | |
}, | |
"RF01742": { | |
"AC": "RF01742", | |
"ID": "lactis-plasmid", | |
"DE": "lactis-plasmid RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "lactis-plasmid RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01742" | |
} | |
] | |
}, | |
"RF01743": { | |
"AC": "RF01743", | |
"ID": "leu-phe_leader", | |
"DE": "leu/phe leader RNA from Lactococcus", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01743" | |
} | |
] | |
}, | |
"RF01744": { | |
"AC": "RF01744", | |
"ID": "livK", | |
"DE": "livK RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01744" | |
} | |
] | |
}, | |
"RF01745": { | |
"AC": "RF01745", | |
"ID": "manA", | |
"DE": "manA RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01745" | |
} | |
] | |
}, | |
"RF01746": { | |
"AC": "RF01746", | |
"ID": "mraW", | |
"DE": "mraW RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01746" | |
} | |
] | |
}, | |
"RF01747": { | |
"AC": "RF01747", | |
"ID": "msiK", | |
"DE": "msiK RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01747" | |
} | |
] | |
}, | |
"RF01748": { | |
"AC": "RF01748", | |
"ID": "nuoG", | |
"DE": "nuoG RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01748" | |
} | |
] | |
}, | |
"RF01749": { | |
"AC": "RF01749", | |
"ID": "pan", | |
"DE": "pan motif", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01749" | |
} | |
] | |
}, | |
"RF01750": { | |
"AC": "RF01750", | |
"ID": "pfl", | |
"DE": "pfl RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01750" | |
} | |
] | |
}, | |
"RF01751": { | |
"AC": "RF01751", | |
"ID": "potC", | |
"DE": "potC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01751" | |
} | |
] | |
}, | |
"RF01752": { | |
"AC": "RF01752", | |
"ID": "psaA", | |
"DE": "psaA RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01752" | |
} | |
] | |
}, | |
"RF01753": { | |
"AC": "RF01753", | |
"ID": "psbNH", | |
"DE": "psbNH RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01753" | |
} | |
] | |
}, | |
"RF01754": { | |
"AC": "RF01754", | |
"ID": "radC", | |
"DE": "radC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01754" | |
} | |
] | |
}, | |
"RF01755": { | |
"AC": "RF01755", | |
"ID": "rmf", | |
"DE": "rmf RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01755" | |
} | |
] | |
}, | |
"RF01756": { | |
"AC": "RF01756", | |
"ID": "rne-II", | |
"DE": "rne-II RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01756" | |
} | |
] | |
}, | |
"RF01757": { | |
"AC": "RF01757", | |
"ID": "sbcD", | |
"DE": "sbcD RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sbcD RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01757" | |
} | |
] | |
}, | |
"RF01758": { | |
"AC": "RF01758", | |
"ID": "sucA-II", | |
"DE": "sucA-II RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01758" | |
} | |
] | |
}, | |
"RF01759": { | |
"AC": "RF01759", | |
"ID": "sucC", | |
"DE": "sucC RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01759" | |
} | |
] | |
}, | |
"RF01760": { | |
"AC": "RF01760", | |
"ID": "traJ-II", | |
"DE": "traJ-II RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01760" | |
} | |
] | |
}, | |
"RF01761": { | |
"AC": "RF01761", | |
"ID": "wcaG", | |
"DE": "wcaG RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01761" | |
} | |
] | |
}, | |
"RF01762": { | |
"AC": "RF01762", | |
"ID": "whalefall-1", | |
"DE": "Whalefall-1 RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Whalefall-1 RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01762" | |
} | |
] | |
}, | |
"RF01763": { | |
"AC": "RF01763", | |
"ID": "ykkC-III", | |
"DE": "ykkC-III RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01763" | |
} | |
] | |
}, | |
"RF01764": { | |
"AC": "RF01764", | |
"ID": "yjdF", | |
"DE": "yjdF RNA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01764" | |
} | |
] | |
}, | |
"RF01765": { | |
"AC": "RF01765", | |
"ID": "srg1", | |
"DE": "srg1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "srg1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01765" | |
} | |
] | |
}, | |
"RF01766": { | |
"AC": "RF01766", | |
"ID": "cspA", | |
"DE": "cspA thermoregulator", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01766" | |
} | |
] | |
}, | |
"RF01767": { | |
"AC": "RF01767", | |
"ID": "SMK_box_riboswitch", | |
"DE": "SMK box translational riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01767" | |
} | |
] | |
}, | |
"RF01768": { | |
"AC": "RF01768", | |
"ID": "flavi_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01768" | |
} | |
] | |
}, | |
"RF01769": { | |
"AC": "RF01769", | |
"ID": "greA", | |
"DE": "Enterobacteria greA leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacteria greA leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01769" | |
} | |
] | |
}, | |
"RF01770": { | |
"AC": "RF01770", | |
"ID": "rimP", | |
"DE": "Gammaprotebacteria rimP leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Gammaprotebacteria rimP leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01770" | |
} | |
] | |
}, | |
"RF01771": { | |
"AC": "RF01771", | |
"ID": "rnk_leader", | |
"DE": "Enterobacteria rnk leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacteria rnk leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01771" | |
} | |
] | |
}, | |
"RF01772": { | |
"AC": "RF01772", | |
"ID": "rnk_pseudo", | |
"DE": "Pseudomonas rnk leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas rnk leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01772" | |
} | |
] | |
}, | |
"RF01773": { | |
"AC": "RF01773", | |
"ID": "rpsL_psuedo", | |
"DE": "Pseudomonas rpsL leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas rpsL leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01773" | |
} | |
] | |
}, | |
"RF01774": { | |
"AC": "RF01774", | |
"ID": "rpsL_ricks", | |
"DE": "Rickettsia rpsL leader", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Rickettsia rpsL leader" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01774" | |
} | |
] | |
}, | |
"RF01775": { | |
"AC": "RF01775", | |
"ID": "RsaOG", | |
"DE": "RNA S.aureus Orsay G", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA S.aureus Orsay G" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01775" | |
} | |
] | |
}, | |
"RF01776": { | |
"AC": "RF01776", | |
"ID": "RatA", | |
"DE": "RNA anti-toxin A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA anti-toxin A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01776" | |
} | |
] | |
}, | |
"RF01778": { | |
"AC": "RF01778", | |
"ID": "Evf-2_5p", | |
"DE": "Embryonic ventral forebrain-2 long ncRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Embryonic ventral forebrain-2 long ncRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01778" | |
} | |
] | |
}, | |
"RF01779": { | |
"AC": "RF01779", | |
"ID": "AS1726", | |
"DE": "AS1726 sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "AS1726 sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01779" | |
} | |
] | |
}, | |
"RF01780": { | |
"AC": "RF01780", | |
"ID": "AS1890", | |
"DE": "AS1890 sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "AS1890 sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01780" | |
} | |
] | |
}, | |
"RF01781": { | |
"AC": "RF01781", | |
"ID": "ASdes", | |
"DE": "ASdes TB sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ASdes TB sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01781" | |
} | |
] | |
}, | |
"RF01782": { | |
"AC": "RF01782", | |
"ID": "ASpks", | |
"DE": "ASpks TB sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "ASpks TB sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01782" | |
} | |
] | |
}, | |
"RF01783": { | |
"AC": "RF01783", | |
"ID": "b55", | |
"DE": "Mycobacterium B11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Mycobacterium B11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01783" | |
} | |
] | |
}, | |
"RF01784": { | |
"AC": "RF01784", | |
"ID": "bablM", | |
"DE": "bablM sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "bablM sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01784" | |
} | |
] | |
}, | |
"RF01785": { | |
"AC": "RF01785", | |
"ID": "blv_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01785" | |
} | |
] | |
}, | |
"RF01786": { | |
"AC": "RF01786", | |
"ID": "c-di-GMP-II", | |
"DE": "Cyclic di-GMP-II riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01786" | |
} | |
] | |
}, | |
"RF01787": { | |
"AC": "RF01787", | |
"ID": "drz-agam-1", | |
"DE": "drz-agam-1 riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01787" | |
} | |
] | |
}, | |
"RF01788": { | |
"AC": "RF01788", | |
"ID": "drz-agam-2-2", | |
"DE": "drz-agam-2-2 riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01788" | |
} | |
] | |
}, | |
"RF01789": { | |
"AC": "RF01789", | |
"ID": "EBER1", | |
"DE": "Epstein-Barr virus EBER1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Epstein-Barr virus EBER1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01789" | |
} | |
] | |
}, | |
"RF01790": { | |
"AC": "RF01790", | |
"ID": "htlv_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01790" | |
} | |
] | |
}, | |
"RF01791": { | |
"AC": "RF01791", | |
"ID": "F6", | |
"DE": "F6 TB sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "F6 TB sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01791" | |
} | |
] | |
}, | |
"RF01792": { | |
"AC": "RF01792", | |
"ID": "eiav_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01792" | |
} | |
] | |
}, | |
"RF01793": { | |
"AC": "RF01793", | |
"ID": "ffh", | |
"DE": "ffh sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "ffh sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01793" | |
} | |
] | |
}, | |
"RF01794": { | |
"AC": "RF01794", | |
"ID": "sok", | |
"DE": "sok antitoxin", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sok antitoxin" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01794" | |
} | |
] | |
}, | |
"RF01795": { | |
"AC": "RF01795", | |
"ID": "FourU", | |
"DE": "FourU thermometer RNA element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01795" | |
} | |
] | |
}, | |
"RF01796": { | |
"AC": "RF01796", | |
"ID": "frnS", | |
"DE": "Fumarate/nitrate reductase regulator sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Fumarate/nitrate reductase regulator sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01796" | |
} | |
] | |
}, | |
"RF01797": { | |
"AC": "RF01797", | |
"ID": "fstAT", | |
"DE": "Fst antitoxin sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Fst antitoxin sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01797" | |
} | |
] | |
}, | |
"RF01798": { | |
"AC": "RF01798", | |
"ID": "g2", | |
"DE": "G2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "G2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01798" | |
} | |
] | |
}, | |
"RF01800": { | |
"AC": "RF01800", | |
"ID": "gadd7", | |
"DE": "growth arrested DNA-damage inducible gene 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "growth arrested DNA-damage inducible gene 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01800" | |
} | |
] | |
}, | |
"RF01802": { | |
"AC": "RF01802", | |
"ID": "HSUR", | |
"DE": "Herpesvirus saimiri U RNA1/RNA2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "Herpesvirus saimiri U RNA1/RNA2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01802" | |
} | |
] | |
}, | |
"RF01803": { | |
"AC": "RF01803", | |
"ID": "GABA3", | |
"DE": "Editing element of GABA-3 exon 9", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01803" | |
} | |
] | |
}, | |
"RF01804": { | |
"AC": "RF01804", | |
"ID": "Lambda_thermo", | |
"DE": "Lambda phage CIII thermoregulator element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01804" | |
} | |
] | |
}, | |
"RF01807": { | |
"AC": "RF01807", | |
"ID": "GIR1", | |
"DE": "GIR1 branching ribozyme", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "autocatalytically_spliced_intron" | |
}, | |
{ | |
"product": "GIR1 branching ribozyme" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01807" | |
} | |
] | |
}, | |
"RF01808": { | |
"AC": "RF01808", | |
"ID": "MicX", | |
"DE": "MicX Vibrio cholerae sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "MicX Vibrio cholerae sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01808" | |
} | |
] | |
}, | |
"RF01809": { | |
"AC": "RF01809", | |
"ID": "symR", | |
"DE": "SymR antitoxin", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SymR antitoxin" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01809" | |
} | |
] | |
}, | |
"RF01810": { | |
"AC": "RF01810", | |
"ID": "pntA", | |
"DE": "pntA sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "pntA sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01810" | |
} | |
] | |
}, | |
"RF01811": { | |
"AC": "RF01811", | |
"ID": "PtaRNA1", | |
"DE": "Plasmid transferred anti-sense RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Plasmid transferred anti-sense RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01811" | |
} | |
] | |
}, | |
"RF01812": { | |
"AC": "RF01812", | |
"ID": "Pxr", | |
"DE": "Pxr regulatory sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pxr regulatory sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01812" | |
} | |
] | |
}, | |
"RF01813": { | |
"AC": "RF01813", | |
"ID": "rdlD", | |
"DE": "rdlD antitoxin", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rdlD antitoxin" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01813" | |
} | |
] | |
}, | |
"RF01814": { | |
"AC": "RF01814", | |
"ID": "rhtB", | |
"DE": "rhtB sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rhtB sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01814" | |
} | |
] | |
}, | |
"RF01815": { | |
"AC": "RF01815", | |
"ID": "rpsB", | |
"DE": "rpsB sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rpsB sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01815" | |
} | |
] | |
}, | |
"RF01816": { | |
"AC": "RF01816", | |
"ID": "RsaA", | |
"DE": "RNA Staph. aureus A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01816" | |
} | |
] | |
}, | |
"RF01817": { | |
"AC": "RF01817", | |
"ID": "RsaB", | |
"DE": "RNA Staph. aureus A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01817" | |
} | |
] | |
}, | |
"RF01818": { | |
"AC": "RF01818", | |
"ID": "RsaC", | |
"DE": "RNA Staph. aureus C", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus C" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01818" | |
} | |
] | |
}, | |
"RF01819": { | |
"AC": "RF01819", | |
"ID": "RsaD", | |
"DE": "RNA Staph. aureus D", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus D" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01819" | |
} | |
] | |
}, | |
"RF01820": { | |
"AC": "RF01820", | |
"ID": "RsaE", | |
"DE": "RNA Staph. aureus E", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus E" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01820" | |
} | |
] | |
}, | |
"RF01821": { | |
"AC": "RF01821", | |
"ID": "RsaH", | |
"DE": "RNA Staph. aureus H", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus H" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01821" | |
} | |
] | |
}, | |
"RF01822": { | |
"AC": "RF01822", | |
"ID": "RsaJ", | |
"DE": "RNA Staph. aureus A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01822" | |
} | |
] | |
}, | |
"RF01823": { | |
"AC": "RF01823", | |
"ID": "rspL", | |
"DE": "rpsL sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rpsL sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01823" | |
} | |
] | |
}, | |
"RF01824": { | |
"AC": "RF01824", | |
"ID": "RUF20", | |
"DE": "RNA of unknown function 20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA of unknown function 20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01824" | |
} | |
] | |
}, | |
"RF01825": { | |
"AC": "RF01825", | |
"ID": "RUF21", | |
"DE": "RNA of unknown function 21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA of unknown function 21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01825" | |
} | |
] | |
}, | |
"RF01826": { | |
"AC": "RF01826", | |
"ID": "SAM_V", | |
"DE": "SAM-V riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01826" | |
} | |
] | |
}, | |
"RF01827": { | |
"AC": "RF01827", | |
"ID": "SAR11_0636", | |
"DE": "SAR11_0636 sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SAR11_0636 sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01827" | |
} | |
] | |
}, | |
"RF01828": { | |
"AC": "RF01828", | |
"ID": "SprD", | |
"DE": "Small pathogenicity island RNA D", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Small pathogenicity island RNA D" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01828" | |
} | |
] | |
}, | |
"RF01829": { | |
"AC": "RF01829", | |
"ID": "sR6", | |
"DE": "sR6 snoRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "sR6 snoRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01829" | |
} | |
] | |
}, | |
"RF01830": { | |
"AC": "RF01830", | |
"ID": "StyR-44", | |
"DE": "Salmonella enterica Typhi npcRNA 44", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica Typhi npcRNA 44" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01830" | |
} | |
] | |
}, | |
"RF01831": { | |
"AC": "RF01831", | |
"ID": "THF", | |
"DE": "THF riboswitch", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "riboswitch" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01831" | |
} | |
] | |
}, | |
"RF01832": { | |
"AC": "RF01832", | |
"ID": "ROSE_2", | |
"DE": "Repression of heat shock gene expression (ROSE) element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01832" | |
} | |
] | |
}, | |
"RF01833": { | |
"AC": "RF01833", | |
"ID": "astro_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01833" | |
} | |
] | |
}, | |
"RF01834": { | |
"AC": "RF01834", | |
"ID": "fiv_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01834" | |
} | |
] | |
}, | |
"RF01835": { | |
"AC": "RF01835", | |
"ID": "HIV_FS2", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01835" | |
} | |
] | |
}, | |
"RF01836": { | |
"AC": "RF01836", | |
"ID": "weev_FSE", | |
"DE": "ribosomal frameshift site", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01836" | |
} | |
] | |
}, | |
"RF01837": { | |
"AC": "RF01837", | |
"ID": "toga_FSE", | |
"DE": "togavirus ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01837" | |
} | |
] | |
}, | |
"RF01838": { | |
"AC": "RF01838", | |
"ID": "sobemo_FSE", | |
"DE": "sobemovirus ribosomal frameshift elemental", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01838" | |
} | |
] | |
}, | |
"RF01839": { | |
"AC": "RF01839", | |
"ID": "eeev_FSE", | |
"DE": "eastern equine encephalitis ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01839" | |
} | |
] | |
}, | |
"RF01840": { | |
"AC": "RF01840", | |
"ID": "ovine_lenti_FSE", | |
"DE": "ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01840" | |
} | |
] | |
}, | |
"RF01841": { | |
"AC": "RF01841", | |
"ID": "veev_FSE", | |
"DE": "venezuelan equine encephalitis virus ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01841" | |
} | |
] | |
}, | |
"RF01842": { | |
"AC": "RF01842", | |
"ID": "mycoplasma_FSE", | |
"DE": "mycoplasma ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01842" | |
} | |
] | |
}, | |
"RF01843": { | |
"AC": "RF01843", | |
"ID": "neisseria_FSE", | |
"DE": "neiserria ribosomal frameshift element", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01843" | |
} | |
] | |
}, | |
"RF01844": { | |
"AC": "RF01844", | |
"ID": "SmY", | |
"DE": "SmY spliceosomal RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snRNA" | |
}, | |
{ | |
"product": "SmY spliceosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01844" | |
} | |
] | |
}, | |
"RF01845": { | |
"AC": "RF01845", | |
"ID": "enod40", | |
"DE": "Early nodulin 40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Early nodulin 40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01845" | |
} | |
] | |
}, | |
"RF01846": { | |
"AC": "RF01846", | |
"ID": "Fungi_U3", | |
"DE": "Fungal small nucleolar RNA U3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Fungal small nucleolar RNA U3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01846" | |
} | |
] | |
}, | |
"RF01847": { | |
"AC": "RF01847", | |
"ID": "Plant_U3", | |
"DE": "Plant small nucleolar RNA U3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Plant small nucleolar RNA U3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01847" | |
} | |
] | |
}, | |
"RF01848": { | |
"AC": "RF01848", | |
"ID": "ACEA_U3", | |
"DE": "ACEA small nucleolar RNA U3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "ACEA small nucleolar RNA U3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01848" | |
} | |
] | |
}, | |
"RF01849": { | |
"AC": "RF01849", | |
"ID": "alpha_tmRNA", | |
"DE": "Alphaproteobacteria transfer-messenger RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacteria transfer-messenger RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01849" | |
} | |
] | |
}, | |
"RF01850": { | |
"AC": "RF01850", | |
"ID": "beta_tmRNA", | |
"DE": "Betaproteobacteria transfer-messenger RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Betaproteobacteria transfer-messenger RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01850" | |
} | |
] | |
}, | |
"RF01851": { | |
"AC": "RF01851", | |
"ID": "cyano_tmRNA", | |
"DE": "Cyanobacteria transfer-messenger RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacteria transfer-messenger RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01851" | |
} | |
] | |
}, | |
"RF01852": { | |
"AC": "RF01852", | |
"ID": "tRNA-Sec", | |
"DE": "Selenocysteine transfer RNA", | |
"feature": "tRNA", | |
"qualifiers": [ | |
{ | |
"product": "Selenocysteine transfer RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01852" | |
} | |
] | |
}, | |
"RF01853": { | |
"AC": "RF01853", | |
"ID": "mtDNA_ssA", | |
"DE": "Mitochondrial DNA control region secondary structure A", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Mitochondrial DNA control region secondary structure A" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01853" | |
} | |
] | |
}, | |
"RF01854": { | |
"AC": "RF01854", | |
"ID": "Bacteria_large_SRP", | |
"DE": "Bacterial large signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Bacterial large signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01854" | |
} | |
] | |
}, | |
"RF01855": { | |
"AC": "RF01855", | |
"ID": "Plant_SRP", | |
"DE": "Plant signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Plant signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01855" | |
} | |
] | |
}, | |
"RF01856": { | |
"AC": "RF01856", | |
"ID": "Protozoa_SRP", | |
"DE": "Protozoan signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Protozoan signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01856" | |
} | |
] | |
}, | |
"RF01857": { | |
"AC": "RF01857", | |
"ID": "Archaea_SRP", | |
"DE": "Archaeal signal recognition particle RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "SRP_RNA" | |
}, | |
{ | |
"product": "Archaeal signal recognition particle RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01857" | |
} | |
] | |
}, | |
"RF01858": { | |
"AC": "RF01858", | |
"ID": "RsaF", | |
"DE": "RNA Staph. aureus F", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "RNA Staph. aureus F" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01858" | |
} | |
] | |
}, | |
"RF01859": { | |
"AC": "RF01859", | |
"ID": "Phe_leader", | |
"DE": "Phenylalanine leader peptide", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01859" | |
} | |
] | |
}, | |
"RF01860": { | |
"AC": "RF01860", | |
"ID": "Afu_455", | |
"DE": "A. fumigatus snoRNA Afu_455", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_455" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01860" | |
} | |
] | |
}, | |
"RF01861": { | |
"AC": "RF01861", | |
"ID": "TB9Cs1H1", | |
"DE": "Trypanosomatid snoRNA TB9Cs1H1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB9Cs1H1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01861" | |
} | |
] | |
}, | |
"RF01862": { | |
"AC": "RF01862", | |
"ID": "TB10Cs4H2", | |
"DE": "Trypanosomatid snoRNA TB10Cs4H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs4H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01862" | |
} | |
] | |
}, | |
"RF01863": { | |
"AC": "RF01863", | |
"ID": "TB10Cs2H2", | |
"DE": "Trypanosomatid snoRNA TB10Cs2H2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Trypanosomatid snoRNA TB10Cs2H2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01863" | |
} | |
] | |
}, | |
"RF01864": { | |
"AC": "RF01864", | |
"ID": "plasmodium_snoR21", | |
"DE": "small nucleolar RNA snoR21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "small nucleolar RNA snoR21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01864" | |
} | |
] | |
}, | |
"RF01865": { | |
"AC": "RF01865", | |
"ID": "Vg1_ribozyme", | |
"DE": "Manganese dependent ribozyme in Vg1 mRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Manganese dependent ribozyme in Vg1 mRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01865" | |
} | |
] | |
}, | |
"RF01866": { | |
"AC": "RF01866", | |
"ID": "ceN33", | |
"DE": "C. elegans snoRNA ceN33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "C. elegans snoRNA ceN33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01866" | |
} | |
] | |
}, | |
"RF01867": { | |
"AC": "RF01867", | |
"ID": "CC2171", | |
"DE": "caulobacter sRNA CC2171", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "caulobacter sRNA CC2171" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01867" | |
} | |
] | |
}, | |
"RF01871": { | |
"AC": "RF01871", | |
"ID": "MALAT1", | |
"DE": "Metastasis associated lung adenocarcinoma transcript 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Metastasis associated lung adenocarcinoma transcript 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01871" | |
} | |
] | |
}, | |
"RF01872": { | |
"AC": "RF01872", | |
"ID": "MEG3_2", | |
"DE": "Maternally expressed 3 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Maternally expressed 3 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01872" | |
} | |
] | |
}, | |
"RF01873": { | |
"AC": "RF01873", | |
"ID": "PISRT1", | |
"DE": "Polled intersex syndrome regulated transcript 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Polled intersex syndrome regulated transcript 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01873" | |
} | |
] | |
}, | |
"RF01874": { | |
"AC": "RF01874", | |
"ID": "MIAT_exon1", | |
"DE": "Myocardial infarction associated transcript exon 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Myocardial infarction associated transcript exon 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01874" | |
} | |
] | |
}, | |
"RF01875": { | |
"AC": "RF01875", | |
"ID": "MIAT_exon5_1", | |
"DE": "Myocardial infarction associated transcript exon 5 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Myocardial infarction associated transcript exon 5 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01875" | |
} | |
] | |
}, | |
"RF01876": { | |
"AC": "RF01876", | |
"ID": "MIAT_exon5_2", | |
"DE": "Myocardial infarction associated transcript exon 5 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Myocardial infarction associated transcript exon 5 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01876" | |
} | |
] | |
}, | |
"RF01877": { | |
"AC": "RF01877", | |
"ID": "MIAT_exon5_3", | |
"DE": "Myocardial infarction associated transcript exon 5 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Myocardial infarction associated transcript exon 5 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01877" | |
} | |
] | |
}, | |
"RF01879": { | |
"AC": "RF01879", | |
"ID": "TUSC7", | |
"DE": "Non-coding RNA LOC285194", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Non-coding RNA LOC285194" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01879" | |
} | |
] | |
}, | |
"RF01880": { | |
"AC": "RF01880", | |
"ID": "Xist_exon1", | |
"DE": "X-chromosome inactivation gene exon 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "X-chromosome inactivation gene exon 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01880" | |
} | |
] | |
}, | |
"RF01881": { | |
"AC": "RF01881", | |
"ID": "Xist_exon4", | |
"DE": "X-chromosome inactivation gene exon 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "X-chromosome inactivation gene exon 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01881" | |
} | |
] | |
}, | |
"RF01882": { | |
"AC": "RF01882", | |
"ID": "TUG1_1", | |
"DE": "Taurine upregulated gene 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Taurine upregulated gene 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01882" | |
} | |
] | |
}, | |
"RF01883": { | |
"AC": "RF01883", | |
"ID": "TUG1_2", | |
"DE": "Taurine upregulated gene 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Taurine upregulated gene 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01883" | |
} | |
] | |
}, | |
"RF01884": { | |
"AC": "RF01884", | |
"ID": "LINC00901", | |
"DE": "Non-coding RNA BC040587", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Non-coding RNA BC040587" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01884" | |
} | |
] | |
}, | |
"RF01885": { | |
"AC": "RF01885", | |
"ID": "HSR-omega_1", | |
"DE": "Heat shock gene hsromega conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Heat shock gene hsromega conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01885" | |
} | |
] | |
}, | |
"RF01886": { | |
"AC": "RF01886", | |
"ID": "HSR-omega_2", | |
"DE": "Heat shock gene hsromega conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Heat shock gene hsromega conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01886" | |
} | |
] | |
}, | |
"RF01887": { | |
"AC": "RF01887", | |
"ID": "DLX6-AS1_1", | |
"DE": "Embryonic ventral forebrain RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Embryonic ventral forebrain RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01887" | |
} | |
] | |
}, | |
"RF01888": { | |
"AC": "RF01888", | |
"ID": "DLX6-AS1_2", | |
"DE": "Embryonic ventral forebrain RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Embryonic ventral forebrain RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01888" | |
} | |
] | |
}, | |
"RF01889": { | |
"AC": "RF01889", | |
"ID": "lincRNA-p21_1", | |
"DE": "LincRNA-p21 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "LincRNA-p21 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01889" | |
} | |
] | |
}, | |
"RF01890": { | |
"AC": "RF01890", | |
"ID": "lincRNA-p21_2", | |
"DE": "LincRNA-p21 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "LincRNA-p21 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01890" | |
} | |
] | |
}, | |
"RF01891": { | |
"AC": "RF01891", | |
"ID": "TUG1_3", | |
"DE": "Taurine upregulated gene 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Taurine upregulated gene 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01891" | |
} | |
] | |
}, | |
"RF01892": { | |
"AC": "RF01892", | |
"ID": "TUG1_4", | |
"DE": "Taurine upregulated gene 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Taurine upregulated gene 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01892" | |
} | |
] | |
}, | |
"RF01894": { | |
"AC": "RF01894", | |
"ID": "PCA3_2", | |
"DE": "Prostate cancer antigen RNA 3 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Prostate cancer antigen RNA 3 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01894" | |
} | |
] | |
}, | |
"RF01895": { | |
"AC": "RF01895", | |
"ID": "mir-193", | |
"DE": "microRNA mir-193", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-193" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01895" | |
} | |
] | |
}, | |
"RF01896": { | |
"AC": "RF01896", | |
"ID": "mir-142", | |
"DE": "microRNA mir-142", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-142" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01896" | |
} | |
] | |
}, | |
"RF01897": { | |
"AC": "RF01897", | |
"ID": "mir-188", | |
"DE": "microRNA mir-188", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-188" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01897" | |
} | |
] | |
}, | |
"RF01898": { | |
"AC": "RF01898", | |
"ID": "mir-363", | |
"DE": "microRNA mir-363", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-363" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01898" | |
} | |
] | |
}, | |
"RF01899": { | |
"AC": "RF01899", | |
"ID": "mir-2241", | |
"DE": "microRNA mir-2241", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2241" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01899" | |
} | |
] | |
}, | |
"RF01900": { | |
"AC": "RF01900", | |
"ID": "mir-2024", | |
"DE": "microRNA mir-2024", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2024" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01900" | |
} | |
] | |
}, | |
"RF01901": { | |
"AC": "RF01901", | |
"ID": "mir-284", | |
"DE": "microRNA mir-284", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-284" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01901" | |
} | |
] | |
}, | |
"RF01902": { | |
"AC": "RF01902", | |
"ID": "MIR439", | |
"DE": "microRNA MIR439", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR439" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01902" | |
} | |
] | |
}, | |
"RF01903": { | |
"AC": "RF01903", | |
"ID": "mir-500", | |
"DE": "microRNA mir-500", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-500" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01903" | |
} | |
] | |
}, | |
"RF01904": { | |
"AC": "RF01904", | |
"ID": "HOTAIR_1", | |
"DE": "HOTAIR conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOTAIR conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01904" | |
} | |
] | |
}, | |
"RF01905": { | |
"AC": "RF01905", | |
"ID": "HOTAIR_2", | |
"DE": "HOTAIR conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOTAIR conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01905" | |
} | |
] | |
}, | |
"RF01906": { | |
"AC": "RF01906", | |
"ID": "HOTAIR_3", | |
"DE": "HOTAIR conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOTAIR conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01906" | |
} | |
] | |
}, | |
"RF01909": { | |
"AC": "RF01909", | |
"ID": "CDKN2B-AS", | |
"DE": "CDKN2B antisense RNA 1 intronic convserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "CDKN2B antisense RNA 1 intronic convserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01909" | |
} | |
] | |
}, | |
"RF01910": { | |
"AC": "RF01910", | |
"ID": "mir-506", | |
"DE": "microRNA mir-506", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-506" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01910" | |
} | |
] | |
}, | |
"RF01911": { | |
"AC": "RF01911", | |
"ID": "MIR2118", | |
"DE": "microRNA MIR2118", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR2118" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01911" | |
} | |
] | |
}, | |
"RF01912": { | |
"AC": "RF01912", | |
"ID": "mir-2807", | |
"DE": "microRNA mir-2807", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2807" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01912" | |
} | |
] | |
}, | |
"RF01913": { | |
"AC": "RF01913", | |
"ID": "mir-2778", | |
"DE": "microRNA mir-2778", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2778" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01913" | |
} | |
] | |
}, | |
"RF01914": { | |
"AC": "RF01914", | |
"ID": "mir-932", | |
"DE": "microRNA mir-932", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-932" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01914" | |
} | |
] | |
}, | |
"RF01915": { | |
"AC": "RF01915", | |
"ID": "mir-2238", | |
"DE": "microRNA mir-2238", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2238" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01915" | |
} | |
] | |
}, | |
"RF01916": { | |
"AC": "RF01916", | |
"ID": "mir-988", | |
"DE": "microRNA mir-988", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-988" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01916" | |
} | |
] | |
}, | |
"RF01917": { | |
"AC": "RF01917", | |
"ID": "MIR2587", | |
"DE": "microRNA MIR2587", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR2587" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01917" | |
} | |
] | |
}, | |
"RF01918": { | |
"AC": "RF01918", | |
"ID": "mir-1249", | |
"DE": "microRNA mir-1249", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1249" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01918" | |
} | |
] | |
}, | |
"RF01919": { | |
"AC": "RF01919", | |
"ID": "mir-1419", | |
"DE": "microRNA mir-1419", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1419" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01919" | |
} | |
] | |
}, | |
"RF01920": { | |
"AC": "RF01920", | |
"ID": "mir-764", | |
"DE": "microRNA mir-764", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-764" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01920" | |
} | |
] | |
}, | |
"RF01921": { | |
"AC": "RF01921", | |
"ID": "mir-1296", | |
"DE": "microRNA mir-1296", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1296" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01921" | |
} | |
] | |
}, | |
"RF01922": { | |
"AC": "RF01922", | |
"ID": "mir-654", | |
"DE": "microRNA mir-654", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-654" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01922" | |
} | |
] | |
}, | |
"RF01923": { | |
"AC": "RF01923", | |
"ID": "mir-711", | |
"DE": "microRNA mir-711", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-711" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01923" | |
} | |
] | |
}, | |
"RF01924": { | |
"AC": "RF01924", | |
"ID": "mir-2774", | |
"DE": "microRNA mir-2774", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2774" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01924" | |
} | |
] | |
}, | |
"RF01925": { | |
"AC": "RF01925", | |
"ID": "MIR1428", | |
"DE": "microRNA MIR1428", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1428" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01925" | |
} | |
] | |
}, | |
"RF01926": { | |
"AC": "RF01926", | |
"ID": "mir-981", | |
"DE": "microRNA mir-981", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-981" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01926" | |
} | |
] | |
}, | |
"RF01927": { | |
"AC": "RF01927", | |
"ID": "MIR1222", | |
"DE": "microRNA MIR1222", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1222" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01927" | |
} | |
] | |
}, | |
"RF01928": { | |
"AC": "RF01928", | |
"ID": "Mico1", | |
"DE": "Maternal intergenic circadian oscillating RNA 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Maternal intergenic circadian oscillating RNA 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01928" | |
} | |
] | |
}, | |
"RF01929": { | |
"AC": "RF01929", | |
"ID": "bxd_1", | |
"DE": "Bithoraxoid conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01929" | |
} | |
] | |
}, | |
"RF01930": { | |
"AC": "RF01930", | |
"ID": "bxd_2", | |
"DE": "Bithoraxoid conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01930" | |
} | |
] | |
}, | |
"RF01931": { | |
"AC": "RF01931", | |
"ID": "bxd_3", | |
"DE": "Bithoraxoid conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01931" | |
} | |
] | |
}, | |
"RF01932": { | |
"AC": "RF01932", | |
"ID": "bxd_4", | |
"DE": "Bithoraxoid conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01932" | |
} | |
] | |
}, | |
"RF01933": { | |
"AC": "RF01933", | |
"ID": "bxd_5", | |
"DE": "Bithoraxoid conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01933" | |
} | |
] | |
}, | |
"RF01934": { | |
"AC": "RF01934", | |
"ID": "bxd_6", | |
"DE": "Bithoraxoid conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01934" | |
} | |
] | |
}, | |
"RF01935": { | |
"AC": "RF01935", | |
"ID": "bxd_7", | |
"DE": "Bithoraxoid conserved region 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Bithoraxoid conserved region 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01935" | |
} | |
] | |
}, | |
"RF01936": { | |
"AC": "RF01936", | |
"ID": "mir-63", | |
"DE": "microRNA mir-63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01936" | |
} | |
] | |
}, | |
"RF01937": { | |
"AC": "RF01937", | |
"ID": "mir-2780", | |
"DE": "microRNA mir-2780", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2780" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01937" | |
} | |
] | |
}, | |
"RF01938": { | |
"AC": "RF01938", | |
"ID": "mir-1251", | |
"DE": "microRNA mir-1251", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1251" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01938" | |
} | |
] | |
}, | |
"RF01939": { | |
"AC": "RF01939", | |
"ID": "mir-761", | |
"DE": "microRNA mir-761", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-761" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01939" | |
} | |
] | |
}, | |
"RF01940": { | |
"AC": "RF01940", | |
"ID": "hvt-mir-H", | |
"DE": "microRNA hvt-mir-H9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA hvt-mir-H9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01940" | |
} | |
] | |
}, | |
"RF01941": { | |
"AC": "RF01941", | |
"ID": "MIR1223", | |
"DE": "microRNA MIR1223", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1223" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01941" | |
} | |
] | |
}, | |
"RF01942": { | |
"AC": "RF01942", | |
"ID": "mir-1937", | |
"DE": "microRNA mir-1937", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1937" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01942" | |
} | |
] | |
}, | |
"RF01943": { | |
"AC": "RF01943", | |
"ID": "mir-999", | |
"DE": "microRNA mir-999", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-999" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01943" | |
} | |
] | |
}, | |
"RF01944": { | |
"AC": "RF01944", | |
"ID": "mir-2518", | |
"DE": "microRNA mir-2518", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2518" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01944" | |
} | |
] | |
}, | |
"RF01945": { | |
"AC": "RF01945", | |
"ID": "mir-1388", | |
"DE": "microRNA mir-1388", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1388" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01945" | |
} | |
] | |
}, | |
"RF01946": { | |
"AC": "RF01946", | |
"ID": "KCNQ1OT1_1", | |
"DE": "KCNQ1 overlapping transcript 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "KCNQ1 overlapping transcript 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01946" | |
} | |
] | |
}, | |
"RF01947": { | |
"AC": "RF01947", | |
"ID": "KCNQ1OT1_2", | |
"DE": "KCNQ1 overlapping transcript 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "KCNQ1 overlapping transcript 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01947" | |
} | |
] | |
}, | |
"RF01948": { | |
"AC": "RF01948", | |
"ID": "KCNQ1OT1_3", | |
"DE": "KCNQ1 overlapping transcript 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "KCNQ1 overlapping transcript 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01948" | |
} | |
] | |
}, | |
"RF01950": { | |
"AC": "RF01950", | |
"ID": "KCNQ1OT1_5", | |
"DE": "KCNQ1 overlapping transcript 1 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "KCNQ1 overlapping transcript 1 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01950" | |
} | |
] | |
}, | |
"RF01951": { | |
"AC": "RF01951", | |
"ID": "SOX2OT_exon1", | |
"DE": "SOX2 overlapping transcript exon 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SOX2 overlapping transcript exon 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01951" | |
} | |
] | |
}, | |
"RF01952": { | |
"AC": "RF01952", | |
"ID": "SOX2OT_exon2", | |
"DE": "SOX2 overlapping transcript exon 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SOX2 overlapping transcript exon 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01952" | |
} | |
] | |
}, | |
"RF01953": { | |
"AC": "RF01953", | |
"ID": "SOX2OT_exon3", | |
"DE": "SOX2 overlapping transcript exon 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SOX2 overlapping transcript exon 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01953" | |
} | |
] | |
}, | |
"RF01954": { | |
"AC": "RF01954", | |
"ID": "SOX2OT_exon4", | |
"DE": "SOX2 overlapping transcript exon 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SOX2 overlapping transcript exon 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01954" | |
} | |
] | |
}, | |
"RF01955": { | |
"AC": "RF01955", | |
"ID": "NEAT1_1", | |
"DE": "Nuclear enriched abundant transcript 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Nuclear enriched abundant transcript 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01955" | |
} | |
] | |
}, | |
"RF01956": { | |
"AC": "RF01956", | |
"ID": "NEAT1_2", | |
"DE": "Nuclear enriched abundant transcript 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Nuclear enriched abundant transcript 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01956" | |
} | |
] | |
}, | |
"RF01957": { | |
"AC": "RF01957", | |
"ID": "NEAT1_3", | |
"DE": "Nuclear enriched abundant transcript 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Nuclear enriched abundant transcript 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01957" | |
} | |
] | |
}, | |
"RF01959": { | |
"AC": "RF01959", | |
"ID": "SSU_rRNA_archaea", | |
"DE": "Archaeal small subunit ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "Archaeal small subunit ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01959" | |
} | |
] | |
}, | |
"RF01960": { | |
"AC": "RF01960", | |
"ID": "SSU_rRNA_eukarya", | |
"DE": "Eukaryotic small subunit ribosomal RNA", | |
"feature": "rRNA", | |
"qualifiers": [ | |
{ | |
"product": "Eukaryotic small subunit ribosomal RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01960" | |
} | |
] | |
}, | |
"RF01962": { | |
"AC": "RF01962", | |
"ID": "RMST_1", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01962" | |
} | |
] | |
}, | |
"RF01963": { | |
"AC": "RF01963", | |
"ID": "RMST_2", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01963" | |
} | |
] | |
}, | |
"RF01964": { | |
"AC": "RF01964", | |
"ID": "RMST_3", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01964" | |
} | |
] | |
}, | |
"RF01965": { | |
"AC": "RF01965", | |
"ID": "RMST_4", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01965" | |
} | |
] | |
}, | |
"RF01966": { | |
"AC": "RF01966", | |
"ID": "RMST_5", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01966" | |
} | |
] | |
}, | |
"RF01967": { | |
"AC": "RF01967", | |
"ID": "RMST_6", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01967" | |
} | |
] | |
}, | |
"RF01968": { | |
"AC": "RF01968", | |
"ID": "RMST_7", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01968" | |
} | |
] | |
}, | |
"RF01969": { | |
"AC": "RF01969", | |
"ID": "RMST_8", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01969" | |
} | |
] | |
}, | |
"RF01970": { | |
"AC": "RF01970", | |
"ID": "RMST_9", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01970" | |
} | |
] | |
}, | |
"RF01971": { | |
"AC": "RF01971", | |
"ID": "RMST_10", | |
"DE": "Rhabdomyosarcoma 2 associated transcript conserved region 10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Rhabdomyosarcoma 2 associated transcript conserved region 10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01971" | |
} | |
] | |
}, | |
"RF01972": { | |
"AC": "RF01972", | |
"ID": "H19_1", | |
"DE": "H19 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "H19 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01972" | |
} | |
] | |
}, | |
"RF01973": { | |
"AC": "RF01973", | |
"ID": "H19_2", | |
"DE": "H19 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "H19 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01973" | |
} | |
] | |
}, | |
"RF01974": { | |
"AC": "RF01974", | |
"ID": "H19_3", | |
"DE": "H19 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "H19 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01974" | |
} | |
] | |
}, | |
"RF01975": { | |
"AC": "RF01975", | |
"ID": "HOTAIRM1_1", | |
"DE": "HOX antisense intergenic RNA myeloid 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOX antisense intergenic RNA myeloid 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01975" | |
} | |
] | |
}, | |
"RF01976": { | |
"AC": "RF01976", | |
"ID": "HOTAIRM1_2", | |
"DE": "HOX antisense intergenic RNA myeloid 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOX antisense intergenic RNA myeloid 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01976" | |
} | |
] | |
}, | |
"RF01977": { | |
"AC": "RF01977", | |
"ID": "HOTAIRM1_3", | |
"DE": "HOX antisense intergenic RNA myeloid 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOX antisense intergenic RNA myeloid 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01977" | |
} | |
] | |
}, | |
"RF01978": { | |
"AC": "RF01978", | |
"ID": "HOTAIRM1_4", | |
"DE": "HOX antisense intergenic RNA myeloid 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOX antisense intergenic RNA myeloid 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01978" | |
} | |
] | |
}, | |
"RF01979": { | |
"AC": "RF01979", | |
"ID": "HOTAIRM1_5", | |
"DE": "HOX antisense intergenic RNA myeloid 1 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOX antisense intergenic RNA myeloid 1 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01979" | |
} | |
] | |
}, | |
"RF01981": { | |
"AC": "RF01981", | |
"ID": "PCGEM1", | |
"DE": "Prostate-specific transcript 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Prostate-specific transcript 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01981" | |
} | |
] | |
}, | |
"RF01982": { | |
"AC": "RF01982", | |
"ID": "PYLIS_1", | |
"DE": "Pyrrolysine insertion sequence 1", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01982" | |
} | |
] | |
}, | |
"RF01983": { | |
"AC": "RF01983", | |
"ID": "Pinc", | |
"DE": "Pregnancy induced noncoding RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pregnancy induced noncoding RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01983" | |
} | |
] | |
}, | |
"RF01984": { | |
"AC": "RF01984", | |
"ID": "ZEB2_AS1_1", | |
"DE": "ZEB2 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZEB2 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01984" | |
} | |
] | |
}, | |
"RF01985": { | |
"AC": "RF01985", | |
"ID": "ZEB2_AS1_2", | |
"DE": "ZEB2 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZEB2 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01985" | |
} | |
] | |
}, | |
"RF01986": { | |
"AC": "RF01986", | |
"ID": "ZEB2_AS1_3", | |
"DE": "ZEB2 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZEB2 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01986" | |
} | |
] | |
}, | |
"RF01987": { | |
"AC": "RF01987", | |
"ID": "ZEB2_AS1_4", | |
"DE": "ZEB2 antisense RNA 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZEB2 antisense RNA 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01987" | |
} | |
] | |
}, | |
"RF01988": { | |
"AC": "RF01988", | |
"ID": "SECIS_2", | |
"DE": "Selenocysteine insertion sequence 2", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01988" | |
} | |
] | |
}, | |
"RF01989": { | |
"AC": "RF01989", | |
"ID": "SECIS_3", | |
"DE": "Selenocysteine insertion sequence 3", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01989" | |
} | |
] | |
}, | |
"RF01990": { | |
"AC": "RF01990", | |
"ID": "SECIS_4", | |
"DE": "Selenocysteine insertion sequence 4", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01990" | |
} | |
] | |
}, | |
"RF01991": { | |
"AC": "RF01991", | |
"ID": "SECIS_5", | |
"DE": "Selenocysteine insertion sequence 5", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01991" | |
} | |
] | |
}, | |
"RF01992": { | |
"AC": "RF01992", | |
"ID": "VIS1", | |
"DE": "Viral integration site 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Viral integration site 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01992" | |
} | |
] | |
}, | |
"RF01996": { | |
"AC": "RF01996", | |
"ID": "mir-995", | |
"DE": "microRNA mir-995", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-995" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01996" | |
} | |
] | |
}, | |
"RF01997": { | |
"AC": "RF01997", | |
"ID": "mir-969", | |
"DE": "microRNA mir-969", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-969" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01997" | |
} | |
] | |
}, | |
"RF01998": { | |
"AC": "RF01998", | |
"ID": "group-II-D1D4-1", | |
"DE": "Group II catalytic intron D1-D4-1", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01998" | |
} | |
] | |
}, | |
"RF01999": { | |
"AC": "RF01999", | |
"ID": "group-II-D1D4-2", | |
"DE": "Group II catalytic intron D1-D4-2", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF01999" | |
} | |
] | |
}, | |
"RF02000": { | |
"AC": "RF02000", | |
"ID": "MIR1846", | |
"DE": "microRNA MIR1846", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR1846" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02000" | |
} | |
] | |
}, | |
"RF02001": { | |
"AC": "RF02001", | |
"ID": "group-II-D1D4-3", | |
"DE": "Group II catalytic intron D1-D4-3", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02001" | |
} | |
] | |
}, | |
"RF02002": { | |
"AC": "RF02002", | |
"ID": "mir-720", | |
"DE": "microRNA mir-720", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-720" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02002" | |
} | |
] | |
}, | |
"RF02003": { | |
"AC": "RF02003", | |
"ID": "group-II-D1D4-4", | |
"DE": "Group II catalytic intron D1-D4-4", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02003" | |
} | |
] | |
}, | |
"RF02004": { | |
"AC": "RF02004", | |
"ID": "group-II-D1D4-5", | |
"DE": "Group II catalytic intron D1-D4-5", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02004" | |
} | |
] | |
}, | |
"RF02005": { | |
"AC": "RF02005", | |
"ID": "group-II-D1D4-6", | |
"DE": "Group II catalytic intron D1-D4-6", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02005" | |
} | |
] | |
}, | |
"RF02006": { | |
"AC": "RF02006", | |
"ID": "mir-1253", | |
"DE": "microRNA mir-1253", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1253" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02006" | |
} | |
] | |
}, | |
"RF02007": { | |
"AC": "RF02007", | |
"ID": "mir-1237", | |
"DE": "microRNA mir-1237", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1237" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02007" | |
} | |
] | |
}, | |
"RF02008": { | |
"AC": "RF02008", | |
"ID": "mir-621", | |
"DE": "microRNA mir-621", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-621" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02008" | |
} | |
] | |
}, | |
"RF02009": { | |
"AC": "RF02009", | |
"ID": "mir-987", | |
"DE": "microRNA mir-987", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-987" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02009" | |
} | |
] | |
}, | |
"RF02010": { | |
"AC": "RF02010", | |
"ID": "mir-3180", | |
"DE": "microRNA mir-3180", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-3180" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02010" | |
} | |
] | |
}, | |
"RF02011": { | |
"AC": "RF02011", | |
"ID": "mir-575", | |
"DE": "microRNA mir-575", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-575" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02011" | |
} | |
] | |
}, | |
"RF02012": { | |
"AC": "RF02012", | |
"ID": "group-II-D1D4-7", | |
"DE": "Group II catalytic intron D1-D4-7", | |
"feature": "intron", | |
"qualifiers": [ | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02012" | |
} | |
] | |
}, | |
"RF02013": { | |
"AC": "RF02013", | |
"ID": "mir-1280", | |
"DE": "microRNA mir-1280", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1280" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02013" | |
} | |
] | |
}, | |
"RF02014": { | |
"AC": "RF02014", | |
"ID": "mir-1178", | |
"DE": "microRNA mir-1178", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1178" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02014" | |
} | |
] | |
}, | |
"RF02015": { | |
"AC": "RF02015", | |
"ID": "mir-1287", | |
"DE": "microRNA mir-1287", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1287" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02015" | |
} | |
] | |
}, | |
"RF02016": { | |
"AC": "RF02016", | |
"ID": "mir-1183", | |
"DE": "microRNA mir-1183", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1183" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02016" | |
} | |
] | |
}, | |
"RF02017": { | |
"AC": "RF02017", | |
"ID": "mir-1912", | |
"DE": "microRNA mir-1912", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1912" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02017" | |
} | |
] | |
}, | |
"RF02018": { | |
"AC": "RF02018", | |
"ID": "mir-1207", | |
"DE": "microRNA mir-1207", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1207" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02018" | |
} | |
] | |
}, | |
"RF02019": { | |
"AC": "RF02019", | |
"ID": "mir-1265", | |
"DE": "microRNA mir-1265", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1265" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02019" | |
} | |
] | |
}, | |
"RF02020": { | |
"AC": "RF02020", | |
"ID": "mir-25", | |
"DE": "microRNA mir-25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02020" | |
} | |
] | |
}, | |
"RF02021": { | |
"AC": "RF02021", | |
"ID": "mir-3179", | |
"DE": "microRNA mir-3179", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-3179" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02021" | |
} | |
] | |
}, | |
"RF02022": { | |
"AC": "RF02022", | |
"ID": "mir-1275", | |
"DE": "microRNA mir-1275", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1275" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02022" | |
} | |
] | |
}, | |
"RF02023": { | |
"AC": "RF02023", | |
"ID": "mir-1208", | |
"DE": "microRNA mir-1208", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1208" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02023" | |
} | |
] | |
}, | |
"RF02024": { | |
"AC": "RF02024", | |
"ID": "mir-1180", | |
"DE": "microRNA mir-1180", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1180" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02024" | |
} | |
] | |
}, | |
"RF02025": { | |
"AC": "RF02025", | |
"ID": "mir-3017", | |
"DE": "microRNA mir-3017", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-3017" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02025" | |
} | |
] | |
}, | |
"RF02026": { | |
"AC": "RF02026", | |
"ID": "mir-2833", | |
"DE": "microRNA mir-2833", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-2833" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02026" | |
} | |
] | |
}, | |
"RF02027": { | |
"AC": "RF02027", | |
"ID": "MIR2907", | |
"DE": "microRNA MIR2907", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA MIR2907" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02027" | |
} | |
] | |
}, | |
"RF02028": { | |
"AC": "RF02028", | |
"ID": "mir-1827", | |
"DE": "microRNA mir-1827", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-1827" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02028" | |
} | |
] | |
}, | |
"RF02029": { | |
"AC": "RF02029", | |
"ID": "sraA", | |
"DE": "sraA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sraA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02029" | |
} | |
] | |
}, | |
"RF02030": { | |
"AC": "RF02030", | |
"ID": "tp2", | |
"DE": "tp2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "tp2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02030" | |
} | |
] | |
}, | |
"RF02031": { | |
"AC": "RF02031", | |
"ID": "tpke11", | |
"DE": "tpke11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "tpke11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02031" | |
} | |
] | |
}, | |
"RF02032": { | |
"AC": "RF02032", | |
"ID": "GOLLD", | |
"DE": "Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02032" | |
} | |
] | |
}, | |
"RF02033": { | |
"AC": "RF02033", | |
"ID": "HEARO", | |
"DE": "HNH endonuclease-associated RNA and ORF (HEARO) RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "HNH endonuclease-associated RNA and ORF (HEARO) RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02033" | |
} | |
] | |
}, | |
"RF02034": { | |
"AC": "RF02034", | |
"ID": "IMES-1", | |
"DE": "IMES-1 RNA motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IMES-1 RNA motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02034" | |
} | |
] | |
}, | |
"RF02035": { | |
"AC": "RF02035", | |
"ID": "IMES-2", | |
"DE": "IMES-2 RNA motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IMES-2 RNA motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02035" | |
} | |
] | |
}, | |
"RF02036": { | |
"AC": "RF02036", | |
"ID": "IMES-3", | |
"DE": "IMES-3 RNA motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IMES-3 RNA motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02036" | |
} | |
] | |
}, | |
"RF02037": { | |
"AC": "RF02037", | |
"ID": "IMES-4", | |
"DE": "IMES-4 RNA motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IMES-4 RNA motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02037" | |
} | |
] | |
}, | |
"RF02038": { | |
"AC": "RF02038", | |
"ID": "SPRY4-IT1_1", | |
"DE": "SPRY4-IT1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SPRY4-IT1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02038" | |
} | |
] | |
}, | |
"RF02039": { | |
"AC": "RF02039", | |
"ID": "SPRY4-IT1_2", | |
"DE": "SPRY4-IT1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SPRY4-IT1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02039" | |
} | |
] | |
}, | |
"RF02040": { | |
"AC": "RF02040", | |
"ID": "HOTTIP_1", | |
"DE": "HOXA transcript at the distal tip, conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA transcript at the distal tip, conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02040" | |
} | |
] | |
}, | |
"RF02041": { | |
"AC": "RF02041", | |
"ID": "HOTTIP_2", | |
"DE": "HOXA transcript at the distal tip, conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA transcript at the distal tip, conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02041" | |
} | |
] | |
}, | |
"RF02042": { | |
"AC": "RF02042", | |
"ID": "HOTTIP_3", | |
"DE": "HOXA transcript at the distal tip, conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA transcript at the distal tip, conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02042" | |
} | |
] | |
}, | |
"RF02043": { | |
"AC": "RF02043", | |
"ID": "HOTTIP_4", | |
"DE": "HOXA transcript at the distal tip, conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA transcript at the distal tip, conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02043" | |
} | |
] | |
}, | |
"RF02044": { | |
"AC": "RF02044", | |
"ID": "CDKN2B-AS_2", | |
"DE": "CDKN2B antisense RNA 1 convserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "CDKN2B antisense RNA 1 convserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02044" | |
} | |
] | |
}, | |
"RF02045": { | |
"AC": "RF02045", | |
"ID": "CDKN2B-AS_3", | |
"DE": "CDKN2B antisense RNA 1 convserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "CDKN2B antisense RNA 1 convserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02045" | |
} | |
] | |
}, | |
"RF02046": { | |
"AC": "RF02046", | |
"ID": "Sphinx_1", | |
"DE": "Sphinx_ conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Sphinx_ conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02046" | |
} | |
] | |
}, | |
"RF02047": { | |
"AC": "RF02047", | |
"ID": "Sphinx_2", | |
"DE": "Sphinx conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Sphinx conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02047" | |
} | |
] | |
}, | |
"RF02048": { | |
"AC": "RF02048", | |
"ID": "STnc30", | |
"DE": "Salmonella enterica conserved region STnc30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica conserved region STnc30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02048" | |
} | |
] | |
}, | |
"RF02049": { | |
"AC": "RF02049", | |
"ID": "STnc460", | |
"DE": "Salmonella enterica sRNA STnc460", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc460" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02049" | |
} | |
] | |
}, | |
"RF02050": { | |
"AC": "RF02050", | |
"ID": "STnc470", | |
"DE": "Salmonella enterica sRNA STnc470", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc470" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02050" | |
} | |
] | |
}, | |
"RF02051": { | |
"AC": "RF02051", | |
"ID": "STnc450", | |
"DE": "Enterobacterial sRNA STnc450", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc450" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02051" | |
} | |
] | |
}, | |
"RF02052": { | |
"AC": "RF02052", | |
"ID": "STnc630", | |
"DE": "Enterobacterial sRNA STnc630", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc630" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02052" | |
} | |
] | |
}, | |
"RF02053": { | |
"AC": "RF02053", | |
"ID": "STnc430", | |
"DE": "Enterobacterial sRNA STnc430", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc430" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02053" | |
} | |
] | |
}, | |
"RF02054": { | |
"AC": "RF02054", | |
"ID": "STnc420", | |
"DE": "Salmonella enterica sRNA STnc420", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc420" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02054" | |
} | |
] | |
}, | |
"RF02055": { | |
"AC": "RF02055", | |
"ID": "STnc380", | |
"DE": "Enterobacterial sRNA STnc380", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc380" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02055" | |
} | |
] | |
}, | |
"RF02056": { | |
"AC": "RF02056", | |
"ID": "STnc390", | |
"DE": "Salmonella sRNA STnc390", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella sRNA STnc390" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02056" | |
} | |
] | |
}, | |
"RF02057": { | |
"AC": "RF02057", | |
"ID": "STnc40", | |
"DE": "Salmonella enterica sRNA STnc40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02057" | |
} | |
] | |
}, | |
"RF02058": { | |
"AC": "RF02058", | |
"ID": "STnc400", | |
"DE": "Gammaproteobacterial sRNA STnc400", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Gammaproteobacterial sRNA STnc400" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02058" | |
} | |
] | |
}, | |
"RF02059": { | |
"AC": "RF02059", | |
"ID": "STnc50", | |
"DE": "Salmonella enterica sRNA STnc40", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc40" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02059" | |
} | |
] | |
}, | |
"RF02060": { | |
"AC": "RF02060", | |
"ID": "STnc410", | |
"DE": "Enterobacterial sRNA STnc410", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc410" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02060" | |
} | |
] | |
}, | |
"RF02061": { | |
"AC": "RF02061", | |
"ID": "mir-301", | |
"DE": "microRNA mir-301", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-301" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02061" | |
} | |
] | |
}, | |
"RF02062": { | |
"AC": "RF02062", | |
"ID": "STnc361", | |
"DE": "Salmonella enterica sRNA STnc361", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc361" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02062" | |
} | |
] | |
}, | |
"RF02063": { | |
"AC": "RF02063", | |
"ID": "STnc350", | |
"DE": "Salmonella enterica sRNA STnc350", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc350" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02063" | |
} | |
] | |
}, | |
"RF02064": { | |
"AC": "RF02064", | |
"ID": "STnc370", | |
"DE": "Enterobacterial sRNA STnc370", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc370" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02064" | |
} | |
] | |
}, | |
"RF02065": { | |
"AC": "RF02065", | |
"ID": "STnc340", | |
"DE": "Enterobacterial sRNA STnc340", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc340" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02065" | |
} | |
] | |
}, | |
"RF02066": { | |
"AC": "RF02066", | |
"ID": "STnc320", | |
"DE": "Salmonella enterica sRNA STnc320", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc320" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02066" | |
} | |
] | |
}, | |
"RF02067": { | |
"AC": "RF02067", | |
"ID": "STnc310", | |
"DE": "Salmonella enterica sRNA STnc310", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc310" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02067" | |
} | |
] | |
}, | |
"RF02068": { | |
"AC": "RF02068", | |
"ID": "STnc480", | |
"DE": "Enterobacterial sRNA STnc480", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc480" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02068" | |
} | |
] | |
}, | |
"RF02069": { | |
"AC": "RF02069", | |
"ID": "STnc70", | |
"DE": "Enterobacterial sRNA STnc70", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc70" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02069" | |
} | |
] | |
}, | |
"RF02070": { | |
"AC": "RF02070", | |
"ID": "STnc300", | |
"DE": "Salmonella enterica sRNA STnc300", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc300" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02070" | |
} | |
] | |
}, | |
"RF02071": { | |
"AC": "RF02071", | |
"ID": "STnc280", | |
"DE": "Salmonella enterica sRNA STnc280", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc280" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02071" | |
} | |
] | |
}, | |
"RF02072": { | |
"AC": "RF02072", | |
"ID": "STnc590", | |
"DE": "Salmonella enterica sRNA STnc590", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc590" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02072" | |
} | |
] | |
}, | |
"RF02073": { | |
"AC": "RF02073", | |
"ID": "STnc260", | |
"DE": "Salmonella enterica sRNA STnc260", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc260" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02073" | |
} | |
] | |
}, | |
"RF02074": { | |
"AC": "RF02074", | |
"ID": "STnc240", | |
"DE": "Enterobacterial sRNA STnc240", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc240" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02074" | |
} | |
] | |
}, | |
"RF02075": { | |
"AC": "RF02075", | |
"ID": "STnc230", | |
"DE": "Enterobacterial sRNA STnc230", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc230" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02075" | |
} | |
] | |
}, | |
"RF02076": { | |
"AC": "RF02076", | |
"ID": "STnc100", | |
"DE": "Gammaproteobacterial sRNA STnc100", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Gammaproteobacterial sRNA STnc100" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02076" | |
} | |
] | |
}, | |
"RF02077": { | |
"AC": "RF02077", | |
"ID": "STnc220", | |
"DE": "Salmonella enterica sRNA STnc220", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc220" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02077" | |
} | |
] | |
}, | |
"RF02078": { | |
"AC": "RF02078", | |
"ID": "STnc210", | |
"DE": "Salmonella enterica sRNA STnc210", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc210" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02078" | |
} | |
] | |
}, | |
"RF02079": { | |
"AC": "RF02079", | |
"ID": "STnc180", | |
"DE": "Enterobacterial sRNA STnc180", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc180" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02079" | |
} | |
] | |
}, | |
"RF02080": { | |
"AC": "RF02080", | |
"ID": "STnc170", | |
"DE": "Salmonella enterica sRNA STnc170", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Salmonella enterica sRNA STnc170" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02080" | |
} | |
] | |
}, | |
"RF02081": { | |
"AC": "RF02081", | |
"ID": "STnc550", | |
"DE": "Enterobacterial sRNA STnc550", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc550" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02081" | |
} | |
] | |
}, | |
"RF02082": { | |
"AC": "RF02082", | |
"ID": "STnc540", | |
"DE": "Enterobacterial sRNA STnc540", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc540" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02082" | |
} | |
] | |
}, | |
"RF02083": { | |
"AC": "RF02083", | |
"ID": "OrzO-P", | |
"DE": "OrzO-P RNA antitoxin family", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "OrzO-P RNA antitoxin family" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02083" | |
} | |
] | |
}, | |
"RF02084": { | |
"AC": "RF02084", | |
"ID": "STnc130", | |
"DE": "Enterobacteria sRNA STnc130", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacteria sRNA STnc130" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02084" | |
} | |
] | |
}, | |
"RF02085": { | |
"AC": "RF02085", | |
"ID": "Yar_1", | |
"DE": "Yellow-achaete intergenic RNA conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Yellow-achaete intergenic RNA conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02085" | |
} | |
] | |
}, | |
"RF02086": { | |
"AC": "RF02086", | |
"ID": "Yar_2", | |
"DE": "Yellow-achaete intergenic RNA conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Yellow-achaete intergenic RNA conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02086" | |
} | |
] | |
}, | |
"RF02087": { | |
"AC": "RF02087", | |
"ID": "Yar_3", | |
"DE": "Yellow-achaete intergenic RNA conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Yellow-achaete intergenic RNA conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02087" | |
} | |
] | |
}, | |
"RF02088": { | |
"AC": "RF02088", | |
"ID": "STnc510", | |
"DE": "Enterobacterial sRNA STnc510", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Enterobacterial sRNA STnc510" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02088" | |
} | |
] | |
}, | |
"RF02089": { | |
"AC": "RF02089", | |
"ID": "CLRN1-AS1", | |
"DE": "CLRN1 antisense RNA 1 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "CLRN1 antisense RNA 1 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02089" | |
} | |
] | |
}, | |
"RF02090": { | |
"AC": "RF02090", | |
"ID": "DAOA-AS1_1", | |
"DE": "DAOA antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "DAOA antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02090" | |
} | |
] | |
}, | |
"RF02091": { | |
"AC": "RF02091", | |
"ID": "DAOA-AS1_2", | |
"DE": "DAOA antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "DAOA antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02091" | |
} | |
] | |
}, | |
"RF02092": { | |
"AC": "RF02092", | |
"ID": "mir-2970", | |
"DE": "mir-2970 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-2970 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02092" | |
} | |
] | |
}, | |
"RF02093": { | |
"AC": "RF02093", | |
"ID": "mir-2968", | |
"DE": "mir-2968 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-2968 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02093" | |
} | |
] | |
}, | |
"RF02094": { | |
"AC": "RF02094", | |
"ID": "mir-1803", | |
"DE": "mir-1803 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-1803 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02094" | |
} | |
] | |
}, | |
"RF02095": { | |
"AC": "RF02095", | |
"ID": "mir-2985-2", | |
"DE": "mir-2985-2 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-2985-2 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02095" | |
} | |
] | |
}, | |
"RF02096": { | |
"AC": "RF02096", | |
"ID": "mir-2973", | |
"DE": "mir-2973 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-2973 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02096" | |
} | |
] | |
}, | |
"RF02097": { | |
"AC": "RF02097", | |
"ID": "mir-1662", | |
"DE": "mir-1662 microRNA precursor", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "mir-1662 microRNA precursor" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02097" | |
} | |
] | |
}, | |
"RF02098": { | |
"AC": "RF02098", | |
"ID": "DGCR5", | |
"DE": "DiGeorge syndrome critical region gene 5 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "DiGeorge syndrome critical region gene 5 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02098" | |
} | |
] | |
}, | |
"RF02099": { | |
"AC": "RF02099", | |
"ID": "rivX", | |
"DE": "rivX sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rivX sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02099" | |
} | |
] | |
}, | |
"RF02100": { | |
"AC": "RF02100", | |
"ID": "tfoR", | |
"DE": "Translational regulator of tfoXVC", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Translational regulator of tfoXVC" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02100" | |
} | |
] | |
}, | |
"RF02101": { | |
"AC": "RF02101", | |
"ID": "HULC", | |
"DE": "Highly up-regulated in liver cancer conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Highly up-regulated in liver cancer conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02101" | |
} | |
] | |
}, | |
"RF02102": { | |
"AC": "RF02102", | |
"ID": "DISC2", | |
"DE": "Disrupted in schizophrenia 2 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Disrupted in schizophrenia 2 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02102" | |
} | |
] | |
}, | |
"RF02103": { | |
"AC": "RF02103", | |
"ID": "DLEU1_1", | |
"DE": "Deleted in lymphocytic leukemia 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02103" | |
} | |
] | |
}, | |
"RF02104": { | |
"AC": "RF02104", | |
"ID": "DLEU1_2", | |
"DE": "Deleted in lymphocytic leukemia 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02104" | |
} | |
] | |
}, | |
"RF02105": { | |
"AC": "RF02105", | |
"ID": "DLEU2_1", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02105" | |
} | |
] | |
}, | |
"RF02106": { | |
"AC": "RF02106", | |
"ID": "DLEU2_2", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02106" | |
} | |
] | |
}, | |
"RF02107": { | |
"AC": "RF02107", | |
"ID": "DLEU2_3", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02107" | |
} | |
] | |
}, | |
"RF02108": { | |
"AC": "RF02108", | |
"ID": "DLEU2_4", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02108" | |
} | |
] | |
}, | |
"RF02109": { | |
"AC": "RF02109", | |
"ID": "DLEU2_5", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02109" | |
} | |
] | |
}, | |
"RF02110": { | |
"AC": "RF02110", | |
"ID": "DLEU2_6", | |
"DE": "Deleted in lymphocytic leukemia 2 conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Deleted in lymphocytic leukemia 2 conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02110" | |
} | |
] | |
}, | |
"RF02111": { | |
"AC": "RF02111", | |
"ID": "IS009", | |
"DE": "IS009", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "IS009" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02111" | |
} | |
] | |
}, | |
"RF02112": { | |
"AC": "RF02112", | |
"ID": "DLG2-AS1_1", | |
"DE": "DLG2 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "DLG2 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02112" | |
} | |
] | |
}, | |
"RF02113": { | |
"AC": "RF02113", | |
"ID": "DLG2-AS1_2", | |
"DE": "DLG2 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "DLG2 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02113" | |
} | |
] | |
}, | |
"RF02114": { | |
"AC": "RF02114", | |
"ID": "FAM13A-AS1_1", | |
"DE": "FAM13A antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FAM13A antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02114" | |
} | |
] | |
}, | |
"RF02115": { | |
"AC": "RF02115", | |
"ID": "FAM13A-AS1_2", | |
"DE": "FAM13A antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FAM13A antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02115" | |
} | |
] | |
}, | |
"RF02116": { | |
"AC": "RF02116", | |
"ID": "FAS-AS1", | |
"DE": "FAS antisense RNA 1 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FAS antisense RNA 1 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02116" | |
} | |
] | |
}, | |
"RF02117": { | |
"AC": "RF02117", | |
"ID": "FMR1-AS1_1", | |
"DE": "FMR1 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FMR1 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02117" | |
} | |
] | |
}, | |
"RF02118": { | |
"AC": "RF02118", | |
"ID": "FMR1-AS1_2", | |
"DE": "FMR1 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FMR1 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02118" | |
} | |
] | |
}, | |
"RF02119": { | |
"AC": "RF02119", | |
"ID": "FTX_1", | |
"DE": "FTX transcript, XIST regulator conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FTX transcript, XIST regulator conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02119" | |
} | |
] | |
}, | |
"RF02120": { | |
"AC": "RF02120", | |
"ID": "FTX_2", | |
"DE": "FTX transcript, XIST regulator conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FTX transcript, XIST regulator conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02120" | |
} | |
] | |
}, | |
"RF02121": { | |
"AC": "RF02121", | |
"ID": "FTX_3", | |
"DE": "FTX transcript, XIST regulator conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FTX transcript, XIST regulator conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02121" | |
} | |
] | |
}, | |
"RF02122": { | |
"AC": "RF02122", | |
"ID": "FTX_5", | |
"DE": "FTX transcript, XIST regulator conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FTX transcript, XIST regulator conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02122" | |
} | |
] | |
}, | |
"RF02123": { | |
"AC": "RF02123", | |
"ID": "FTX_4", | |
"DE": "FTX transcript, XIST regulator conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "FTX transcript, XIST regulator conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02123" | |
} | |
] | |
}, | |
"RF02124": { | |
"AC": "RF02124", | |
"ID": "JPX_1", | |
"DE": "JPX transcript, XIST activator conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "JPX transcript, XIST activator conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02124" | |
} | |
] | |
}, | |
"RF02125": { | |
"AC": "RF02125", | |
"ID": "JPX_2", | |
"DE": "JPX transcript, XIST activator conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "JPX transcript, XIST activator conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02125" | |
} | |
] | |
}, | |
"RF02126": { | |
"AC": "RF02126", | |
"ID": "GHRLOS", | |
"DE": "Ghrelin opposite strand RNA conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Ghrelin opposite strand RNA conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02126" | |
} | |
] | |
}, | |
"RF02127": { | |
"AC": "RF02127", | |
"ID": "GNAS-AS1_1", | |
"DE": "GNAS antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "GNAS antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02127" | |
} | |
] | |
}, | |
"RF02128": { | |
"AC": "RF02128", | |
"ID": "GNAS-AS1_2", | |
"DE": "GNAS antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "GNAS antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02128" | |
} | |
] | |
}, | |
"RF02129": { | |
"AC": "RF02129", | |
"ID": "GNAS-AS1_3", | |
"DE": "GNAS antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "GNAS antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02129" | |
} | |
] | |
}, | |
"RF02130": { | |
"AC": "RF02130", | |
"ID": "GNAS-AS1_4", | |
"DE": "GNAS antisense RNA 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "GNAS antisense RNA 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02130" | |
} | |
] | |
}, | |
"RF02131": { | |
"AC": "RF02131", | |
"ID": "GNAS-AS1_5", | |
"DE": "GNAS antisense RNA 1 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "GNAS antisense RNA 1 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02131" | |
} | |
] | |
}, | |
"RF02132": { | |
"AC": "RF02132", | |
"ID": "HOXB13-AS1_1", | |
"DE": "HOXB13 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXB13 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02132" | |
} | |
] | |
}, | |
"RF02133": { | |
"AC": "RF02133", | |
"ID": "HOXB13-AS1_2", | |
"DE": "HOXB13 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXB13 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02133" | |
} | |
] | |
}, | |
"RF02134": { | |
"AC": "RF02134", | |
"ID": "HTT-AS1_1", | |
"DE": "HTT antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HTT antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02134" | |
} | |
] | |
}, | |
"RF02135": { | |
"AC": "RF02135", | |
"ID": "HTT-AS1_2", | |
"DE": "HTT antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HTT antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02135" | |
} | |
] | |
}, | |
"RF02136": { | |
"AC": "RF02136", | |
"ID": "HTT-AS1_3", | |
"DE": "HTT antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HTT antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02136" | |
} | |
] | |
}, | |
"RF02137": { | |
"AC": "RF02137", | |
"ID": "HOXA11-AS1_1", | |
"DE": "HOXA11 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02137" | |
} | |
] | |
}, | |
"RF02138": { | |
"AC": "RF02138", | |
"ID": "HOXA11-AS1_2", | |
"DE": "HOXA11 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02138" | |
} | |
] | |
}, | |
"RF02139": { | |
"AC": "RF02139", | |
"ID": "HOXA11-AS1_3", | |
"DE": "HOXA11 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02139" | |
} | |
] | |
}, | |
"RF02140": { | |
"AC": "RF02140", | |
"ID": "HOXA11-AS1_4", | |
"DE": "HOXA11 antisense RNA 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02140" | |
} | |
] | |
}, | |
"RF02141": { | |
"AC": "RF02141", | |
"ID": "HOXA11-AS1_5", | |
"DE": "HOXA11 antisense RNA 1 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02141" | |
} | |
] | |
}, | |
"RF02142": { | |
"AC": "RF02142", | |
"ID": "HOXA11-AS1_6", | |
"DE": "HOXA11 antisense RNA 1 conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "HOXA11 antisense RNA 1 conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02142" | |
} | |
] | |
}, | |
"RF02143": { | |
"AC": "RF02143", | |
"ID": "HYMAI", | |
"DE": "Hydatidiform mole associated and imprinted conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Hydatidiform mole associated and imprinted conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02143" | |
} | |
] | |
}, | |
"RF02144": { | |
"AC": "RF02144", | |
"ID": "rsmX", | |
"DE": "rsmX", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "rsmX" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02144" | |
} | |
] | |
}, | |
"RF02145": { | |
"AC": "RF02145", | |
"ID": "MEG8_1", | |
"DE": "Maternally expressed 8 exon 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Maternally expressed 8 exon 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02145" | |
} | |
] | |
}, | |
"RF02146": { | |
"AC": "RF02146", | |
"ID": "MEG8_2", | |
"DE": "Maternally expressed 8 exon 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Maternally expressed 8 exon 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02146" | |
} | |
] | |
}, | |
"RF02147": { | |
"AC": "RF02147", | |
"ID": "MEG8_3", | |
"DE": "Maternally expressed 8 exon 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Maternally expressed 8 exon 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02147" | |
} | |
] | |
}, | |
"RF02148": { | |
"AC": "RF02148", | |
"ID": "MESTIT1_1", | |
"DE": "MEST intronic transcript 1, antisense RNA conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "MEST intronic transcript 1, antisense RNA conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02148" | |
} | |
] | |
}, | |
"RF02149": { | |
"AC": "RF02149", | |
"ID": "MESTIT1_2", | |
"DE": "MEST intronic transcript 1, antisense RNA conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "MEST intronic transcript 1, antisense RNA conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02149" | |
} | |
] | |
}, | |
"RF02150": { | |
"AC": "RF02150", | |
"ID": "MESTIT1_3", | |
"DE": "MEST intronic transcript 1, antisense RNA conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "MEST intronic transcript 1, antisense RNA conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02150" | |
} | |
] | |
}, | |
"RF02151": { | |
"AC": "RF02151", | |
"ID": "MIMT1_1", | |
"DE": "MER1 repeat containing imprinted transcript 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "MER1 repeat containing imprinted transcript 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02151" | |
} | |
] | |
}, | |
"RF02153": { | |
"AC": "RF02153", | |
"ID": "NBR2", | |
"DE": "Neighbour of BRCA1 gene 2 converved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Neighbour of BRCA1 gene 2 converved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02153" | |
} | |
] | |
}, | |
"RF02154": { | |
"AC": "RF02154", | |
"ID": "NCRUPAR_1", | |
"DE": "Non-protein coding RNA, upstream of F2R/PAR1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Non-protein coding RNA, upstream of F2R/PAR1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02154" | |
} | |
] | |
}, | |
"RF02155": { | |
"AC": "RF02155", | |
"ID": "NCRUPAR_2", | |
"DE": "Non-protein coding RNA, upstream of F2R/PAR1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Non-protein coding RNA, upstream of F2R/PAR1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02155" | |
} | |
] | |
}, | |
"RF02156": { | |
"AC": "RF02156", | |
"ID": "NPPA-AS1_1", | |
"DE": "NPPA antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "NPPA antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02156" | |
} | |
] | |
}, | |
"RF02157": { | |
"AC": "RF02157", | |
"ID": "NPPA-AS1_2", | |
"DE": "NPPA antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "NPPA antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02157" | |
} | |
] | |
}, | |
"RF02158": { | |
"AC": "RF02158", | |
"ID": "NPPA-AS1_3", | |
"DE": "NPPA antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "NPPA antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02158" | |
} | |
] | |
}, | |
"RF02159": { | |
"AC": "RF02159", | |
"ID": "PART1_1", | |
"DE": "Prostate androgen-regulated transcript 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Prostate androgen-regulated transcript 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02159" | |
} | |
] | |
}, | |
"RF02160": { | |
"AC": "RF02160", | |
"ID": "PART1_2", | |
"DE": "Prostate androgen-regulated transcript 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Prostate androgen-regulated transcript 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02160" | |
} | |
] | |
}, | |
"RF02161": { | |
"AC": "RF02161", | |
"ID": "PART1_3", | |
"DE": "Prostate androgen-regulated transcript 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Prostate androgen-regulated transcript 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02161" | |
} | |
] | |
}, | |
"RF02162": { | |
"AC": "RF02162", | |
"ID": "XIST_A_REPEAT", | |
"DE": "XIST RNA A repeat", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "XIST RNA A repeat" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02162" | |
} | |
] | |
}, | |
"RF02163": { | |
"AC": "RF02163", | |
"ID": "sR-tMet", | |
"DE": "Small nucleolar RNA sR-tMet", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA sR-tMet" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02163" | |
} | |
] | |
}, | |
"RF02164": { | |
"AC": "RF02164", | |
"ID": "PVT1_1", | |
"DE": "Pvt1 oncogene conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02164" | |
} | |
] | |
}, | |
"RF02165": { | |
"AC": "RF02165", | |
"ID": "PVT1_2", | |
"DE": "Pvt1 oncogene conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02165" | |
} | |
] | |
}, | |
"RF02166": { | |
"AC": "RF02166", | |
"ID": "PVT1_3", | |
"DE": "Pvt1 oncogene conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02166" | |
} | |
] | |
}, | |
"RF02167": { | |
"AC": "RF02167", | |
"ID": "PVT1_4", | |
"DE": "Pvt1 oncogene conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02167" | |
} | |
] | |
}, | |
"RF02168": { | |
"AC": "RF02168", | |
"ID": "PVT1_5", | |
"DE": "Pvt1 oncogene conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02168" | |
} | |
] | |
}, | |
"RF02169": { | |
"AC": "RF02169", | |
"ID": "PVT1_6", | |
"DE": "Pvt1 oncogene conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02169" | |
} | |
] | |
}, | |
"RF02170": { | |
"AC": "RF02170", | |
"ID": "PVT1_7", | |
"DE": "Pvt1 oncogene conserved region 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Pvt1 oncogene conserved region 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02170" | |
} | |
] | |
}, | |
"RF02171": { | |
"AC": "RF02171", | |
"ID": "RFPL3-AS1_1", | |
"DE": "RFPL3 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "RFPL3 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02171" | |
} | |
] | |
}, | |
"RF02172": { | |
"AC": "RF02172", | |
"ID": "RFPL3-AS1_2", | |
"DE": "RFPL3 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "RFPL3 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02172" | |
} | |
] | |
}, | |
"RF02173": { | |
"AC": "RF02173", | |
"ID": "SMAD5-AS1_1", | |
"DE": "SMAD5 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SMAD5 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02173" | |
} | |
] | |
}, | |
"RF02174": { | |
"AC": "RF02174", | |
"ID": "SMAD5-AS1_2", | |
"DE": "SMAD5 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SMAD5 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02174" | |
} | |
] | |
}, | |
"RF02175": { | |
"AC": "RF02175", | |
"ID": "SMAD5-AS1_3", | |
"DE": "SMAD5 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SMAD5 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02175" | |
} | |
] | |
}, | |
"RF02176": { | |
"AC": "RF02176", | |
"ID": "SMAD5-AS1_4", | |
"DE": "SMAD5 antisense RNA 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "SMAD5 antisense RNA 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02176" | |
} | |
] | |
}, | |
"RF02177": { | |
"AC": "RF02177", | |
"ID": "SMCR2_1", | |
"DE": "Smith-Magenis syndrome chromosome region, candidate 2 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Smith-Magenis syndrome chromosome region, candidate 2 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02177" | |
} | |
] | |
}, | |
"RF02178": { | |
"AC": "RF02178", | |
"ID": "SMCR2_2", | |
"DE": "Smith-Magenis syndrome chromosome region, candidate 2 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Smith-Magenis syndrome chromosome region, candidate 2 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02178" | |
} | |
] | |
}, | |
"RF02179": { | |
"AC": "RF02179", | |
"ID": "ST7-AS1_1", | |
"DE": "ST7 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02179" | |
} | |
] | |
}, | |
"RF02180": { | |
"AC": "RF02180", | |
"ID": "ST7-AS1_2", | |
"DE": "ST7 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02180" | |
} | |
] | |
}, | |
"RF02181": { | |
"AC": "RF02181", | |
"ID": "ST7-AS2_1", | |
"DE": "ST7 antisense RNA 2 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 antisense RNA 2 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02181" | |
} | |
] | |
}, | |
"RF02182": { | |
"AC": "RF02182", | |
"ID": "ST7-AS2_2", | |
"DE": "ST7 antisense RNA 2 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 antisense RNA 2 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02182" | |
} | |
] | |
}, | |
"RF02183": { | |
"AC": "RF02183", | |
"ID": "ST7-OT3_1", | |
"DE": "ST7 overlapping transcript 3 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 3 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02183" | |
} | |
] | |
}, | |
"RF02184": { | |
"AC": "RF02184", | |
"ID": "ST7-OT3_2", | |
"DE": "ST7 overlapping transcript 3 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 3 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02184" | |
} | |
] | |
}, | |
"RF02185": { | |
"AC": "RF02185", | |
"ID": "ST7-OT3_3", | |
"DE": "ST7 overlapping transcript 3 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 3 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02185" | |
} | |
] | |
}, | |
"RF02186": { | |
"AC": "RF02186", | |
"ID": "ST7-OT3_4", | |
"DE": "ST7 overlapping transcript 3 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 3 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02186" | |
} | |
] | |
}, | |
"RF02187": { | |
"AC": "RF02187", | |
"ID": "ST7-OT4_1", | |
"DE": "ST7 overlapping transcript 4 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 4 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02187" | |
} | |
] | |
}, | |
"RF02188": { | |
"AC": "RF02188", | |
"ID": "ST7-OT4_2", | |
"DE": "ST7 overlapping transcript 4 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 4 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02188" | |
} | |
] | |
}, | |
"RF02189": { | |
"AC": "RF02189", | |
"ID": "ST7-OT4_3", | |
"DE": "ST7 overlapping transcript 4 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 4 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02189" | |
} | |
] | |
}, | |
"RF02190": { | |
"AC": "RF02190", | |
"ID": "ST7-OT4_4", | |
"DE": "ST7 overlapping transcript 4 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ST7 overlapping transcript 4 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02190" | |
} | |
] | |
}, | |
"RF02191": { | |
"AC": "RF02191", | |
"ID": "TCL6_1", | |
"DE": "T-cell leukemia/lymphoma 6 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "T-cell leukemia/lymphoma 6 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02191" | |
} | |
] | |
}, | |
"RF02192": { | |
"AC": "RF02192", | |
"ID": "TCL6_2", | |
"DE": "T-cell leukemia/lymphoma 6 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "T-cell leukemia/lymphoma 6 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02192" | |
} | |
] | |
}, | |
"RF02193": { | |
"AC": "RF02193", | |
"ID": "TCL6_3", | |
"DE": "T-cell leukemia/lymphoma 6 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "T-cell leukemia/lymphoma 6 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02193" | |
} | |
] | |
}, | |
"RF02194": { | |
"AC": "RF02194", | |
"ID": "HPnc0260", | |
"DE": "Bacterial antisense RNA HPnc0260", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "antisense_RNA" | |
}, | |
{ | |
"product": "Bacterial antisense RNA HPnc0260" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02194" | |
} | |
] | |
}, | |
"RF02195": { | |
"AC": "RF02195", | |
"ID": "TP53TG1_1", | |
"DE": "TP53 target 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TP53 target 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02195" | |
} | |
] | |
}, | |
"RF02196": { | |
"AC": "RF02196", | |
"ID": "TP53TG1_2", | |
"DE": "TP53 target 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TP53 target 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02196" | |
} | |
] | |
}, | |
"RF02197": { | |
"AC": "RF02197", | |
"ID": "TP73-AS1", | |
"DE": "TP73 antisense RNA 1 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TP73 antisense RNA 1 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02197" | |
} | |
] | |
}, | |
"RF02198": { | |
"AC": "RF02198", | |
"ID": "TTC28-AS1_1", | |
"DE": "TTC28 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TTC28 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02198" | |
} | |
] | |
}, | |
"RF02199": { | |
"AC": "RF02199", | |
"ID": "TTC28-AS1_2", | |
"DE": "TTC28 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TTC28 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02199" | |
} | |
] | |
}, | |
"RF02200": { | |
"AC": "RF02200", | |
"ID": "TTC28-AS1_3", | |
"DE": "TTC28 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TTC28 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02200" | |
} | |
] | |
}, | |
"RF02201": { | |
"AC": "RF02201", | |
"ID": "TTC28-AS1_4", | |
"DE": "TTC28 antisense RNA 1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "TTC28 antisense RNA 1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02201" | |
} | |
] | |
}, | |
"RF02202": { | |
"AC": "RF02202", | |
"ID": "UCA1", | |
"DE": "Urothelial cancer associated 1 conserved region", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Urothelial cancer associated 1 conserved region" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02202" | |
} | |
] | |
}, | |
"RF02203": { | |
"AC": "RF02203", | |
"ID": "WT1-AS_1", | |
"DE": "WT1 antisense RNA conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02203" | |
} | |
] | |
}, | |
"RF02204": { | |
"AC": "RF02204", | |
"ID": "WT1-AS_2", | |
"DE": "WT1 antisense RNA conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02204" | |
} | |
] | |
}, | |
"RF02205": { | |
"AC": "RF02205", | |
"ID": "WT1-AS_3", | |
"DE": "WT1 antisense RNA conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02205" | |
} | |
] | |
}, | |
"RF02206": { | |
"AC": "RF02206", | |
"ID": "WT1-AS_4", | |
"DE": "WT1 antisense RNA conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02206" | |
} | |
] | |
}, | |
"RF02207": { | |
"AC": "RF02207", | |
"ID": "WT1-AS_5", | |
"DE": "WT1 antisense RNA conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02207" | |
} | |
] | |
}, | |
"RF02208": { | |
"AC": "RF02208", | |
"ID": "WT1-AS_6", | |
"DE": "WT1 antisense RNA conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02208" | |
} | |
] | |
}, | |
"RF02209": { | |
"AC": "RF02209", | |
"ID": "WT1-AS_7", | |
"DE": "WT1 antisense RNA conserved region 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02209" | |
} | |
] | |
}, | |
"RF02210": { | |
"AC": "RF02210", | |
"ID": "WT1-AS_8", | |
"DE": "WT1 antisense RNA conserved region 8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "WT1 antisense RNA conserved region 8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02210" | |
} | |
] | |
}, | |
"RF02211": { | |
"AC": "RF02211", | |
"ID": "ZFAT-AS1_1", | |
"DE": "ZFAT antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZFAT antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02211" | |
} | |
] | |
}, | |
"RF02212": { | |
"AC": "RF02212", | |
"ID": "ZFAT-AS1_2", | |
"DE": "ZFAT antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZFAT antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02212" | |
} | |
] | |
}, | |
"RF02213": { | |
"AC": "RF02213", | |
"ID": "ZFAT-AS1_3", | |
"DE": "ZFAT antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZFAT antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02213" | |
} | |
] | |
}, | |
"RF02214": { | |
"AC": "RF02214", | |
"ID": "mir-56", | |
"DE": "microRNA mir-56", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-56" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02214" | |
} | |
] | |
}, | |
"RF02215": { | |
"AC": "RF02215", | |
"ID": "ZNFX1-AS1_1", | |
"DE": "ZNFX1 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNFX1 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02215" | |
} | |
] | |
}, | |
"RF02216": { | |
"AC": "RF02216", | |
"ID": "ZNFX1-AS1_2", | |
"DE": "ZNFX1 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNFX1 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02216" | |
} | |
] | |
}, | |
"RF02217": { | |
"AC": "RF02217", | |
"ID": "ZNFX1-AS1_3", | |
"DE": "ZNFX1 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNFX1 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02217" | |
} | |
] | |
}, | |
"RF02218": { | |
"AC": "RF02218", | |
"ID": "ZNRD1-AS1_1", | |
"DE": "ZNRD1 antisense RNA 1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNRD1 antisense RNA 1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02218" | |
} | |
] | |
}, | |
"RF02219": { | |
"AC": "RF02219", | |
"ID": "ZNRD1-AS1_2", | |
"DE": "ZNRD1 antisense RNA 1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNRD1 antisense RNA 1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02219" | |
} | |
] | |
}, | |
"RF02220": { | |
"AC": "RF02220", | |
"ID": "ZNRD1-AS1_3", | |
"DE": "ZNRD1 antisense RNA 1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "ZNRD1 antisense RNA 1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02220" | |
} | |
] | |
}, | |
"RF02221": { | |
"AC": "RF02221", | |
"ID": "sRNA-Xcc1", | |
"DE": "sRNA-Xcc1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "sRNA-Xcc1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02221" | |
} | |
] | |
}, | |
"RF02222": { | |
"AC": "RF02222", | |
"ID": "sX2", | |
"DE": "Xanthomonas sRNA sX2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA sX2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02222" | |
} | |
] | |
}, | |
"RF02223": { | |
"AC": "RF02223", | |
"ID": "sX4", | |
"DE": "Proteobacterial sRNA sX4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA sX4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02223" | |
} | |
] | |
}, | |
"RF02224": { | |
"AC": "RF02224", | |
"ID": "sX5", | |
"DE": "Xanthomonadaceae sRNA sX5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA sX5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02224" | |
} | |
] | |
}, | |
"RF02225": { | |
"AC": "RF02225", | |
"ID": "sX6", | |
"DE": "Proteobacterial sRNA sX6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA sX6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02225" | |
} | |
] | |
}, | |
"RF02226": { | |
"AC": "RF02226", | |
"ID": "sX7", | |
"DE": "Xanthomonas sRNA sX7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA sX7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02226" | |
} | |
] | |
}, | |
"RF02227": { | |
"AC": "RF02227", | |
"ID": "sX8", | |
"DE": "Proteobacterial sRNA sX8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA sX8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02227" | |
} | |
] | |
}, | |
"RF02228": { | |
"AC": "RF02228", | |
"ID": "sX9", | |
"DE": "Xanthomonas sRNA sX9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA sX9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02228" | |
} | |
] | |
}, | |
"RF02230": { | |
"AC": "RF02230", | |
"ID": "sX11", | |
"DE": "Proteobacterial sRNA sX11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA sX11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02230" | |
} | |
] | |
}, | |
"RF02231": { | |
"AC": "RF02231", | |
"ID": "sX12", | |
"DE": "Xanthomonas sRNA sX12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA sX12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02231" | |
} | |
] | |
}, | |
"RF02232": { | |
"AC": "RF02232", | |
"ID": "sX13", | |
"DE": "Xanthomonadaceae sRNA sX13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA sX13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02232" | |
} | |
] | |
}, | |
"RF02233": { | |
"AC": "RF02233", | |
"ID": "sX14", | |
"DE": "Xanthomonas sRNA sX14/Xoo3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA sX14/Xoo3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02233" | |
} | |
] | |
}, | |
"RF02234": { | |
"AC": "RF02234", | |
"ID": "sX15", | |
"DE": "Xanthomonadaceae sRNA sX15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA sX15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02234" | |
} | |
] | |
}, | |
"RF02235": { | |
"AC": "RF02235", | |
"ID": "asX1", | |
"DE": "Xanthomonadaceae sRNA asX1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA asX1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02235" | |
} | |
] | |
}, | |
"RF02236": { | |
"AC": "RF02236", | |
"ID": "asX2", | |
"DE": "Xanthomonas sRNA asX2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA asX2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02236" | |
} | |
] | |
}, | |
"RF02237": { | |
"AC": "RF02237", | |
"ID": "asX3", | |
"DE": "Xanthomonas sRNA asX3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA asX3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02237" | |
} | |
] | |
}, | |
"RF02238": { | |
"AC": "RF02238", | |
"ID": "asX4", | |
"DE": "Xanthomonas sRNA asX4/Xoo4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA asX4/Xoo4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02238" | |
} | |
] | |
}, | |
"RF02239": { | |
"AC": "RF02239", | |
"ID": "asX6", | |
"DE": "Xanthomonas sRNA asX6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonas sRNA asX6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02239" | |
} | |
] | |
}, | |
"RF02240": { | |
"AC": "RF02240", | |
"ID": "Xoo1", | |
"DE": "Xanthomonadaceae sRNA Xoo1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA Xoo1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02240" | |
} | |
] | |
}, | |
"RF02241": { | |
"AC": "RF02241", | |
"ID": "Xoo2", | |
"DE": "Xanthomonadaceae sRNA Xoo2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA Xoo2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02241" | |
} | |
] | |
}, | |
"RF02242": { | |
"AC": "RF02242", | |
"ID": "Xoo5", | |
"DE": "Xanthomonadaceae sRNA Xoo5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Xanthomonadaceae sRNA Xoo5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02242" | |
} | |
] | |
}, | |
"RF02243": { | |
"AC": "RF02243", | |
"ID": "Xoo8", | |
"DE": "Proteobacterial sRNA Xoo8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA Xoo8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02243" | |
} | |
] | |
}, | |
"RF02244": { | |
"AC": "RF02244", | |
"ID": "mir-785", | |
"DE": "microRNA mir-785", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-785" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02244" | |
} | |
] | |
}, | |
"RF02245": { | |
"AC": "RF02245", | |
"ID": "mir-788", | |
"DE": "microRNA mir-788", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-788" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02245" | |
} | |
] | |
}, | |
"RF02246": { | |
"AC": "RF02246", | |
"ID": "Six3os1_1", | |
"DE": "Six3os1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02246" | |
} | |
] | |
}, | |
"RF02247": { | |
"AC": "RF02247", | |
"ID": "Six3os1_2", | |
"DE": "Six3os1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02247" | |
} | |
] | |
}, | |
"RF02248": { | |
"AC": "RF02248", | |
"ID": "Six3os1_3", | |
"DE": "Six3os1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02248" | |
} | |
] | |
}, | |
"RF02249": { | |
"AC": "RF02249", | |
"ID": "Six3os1_4", | |
"DE": "Six3os1 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02249" | |
} | |
] | |
}, | |
"RF02250": { | |
"AC": "RF02250", | |
"ID": "Six3os1_5", | |
"DE": "Six3os1 conserved region 5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02250" | |
} | |
] | |
}, | |
"RF02251": { | |
"AC": "RF02251", | |
"ID": "Six3os1_6", | |
"DE": "Six3os1 conserved region 6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02251" | |
} | |
] | |
}, | |
"RF02252": { | |
"AC": "RF02252", | |
"ID": "Six3os1_7", | |
"DE": "Six3os1 conserved region 7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Six3os1 conserved region 7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02252" | |
} | |
] | |
}, | |
"RF02253": { | |
"AC": "RF02253", | |
"ID": "IRE_II", | |
"DE": "Iron response element II", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02253" | |
} | |
] | |
}, | |
"RF02254": { | |
"AC": "RF02254", | |
"ID": "mir-35", | |
"DE": "microRNA mir-35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "microRNA mir-35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02254" | |
} | |
] | |
}, | |
"RF02255": { | |
"AC": "RF02255", | |
"ID": "adapt33_1", | |
"DE": "Adaptive response 33 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Adaptive response 33 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02255" | |
} | |
] | |
}, | |
"RF02256": { | |
"AC": "RF02256", | |
"ID": "adapt33_2", | |
"DE": "Adaptive response 33 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Adaptive response 33 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02256" | |
} | |
] | |
}, | |
"RF02257": { | |
"AC": "RF02257", | |
"ID": "adapt33_3", | |
"DE": "Adaptive response 33 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Adaptive response 33 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02257" | |
} | |
] | |
}, | |
"RF02258": { | |
"AC": "RF02258", | |
"ID": "adapt33_4", | |
"DE": "Adaptive response 33 conserved region 4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Adaptive response 33 conserved region 4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02258" | |
} | |
] | |
}, | |
"RF02259": { | |
"AC": "RF02259", | |
"ID": "Vax2os1_1", | |
"DE": "Vax2os1 conserved region 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Vax2os1 conserved region 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02259" | |
} | |
] | |
}, | |
"RF02260": { | |
"AC": "RF02260", | |
"ID": "MAT2A_A", | |
"DE": "MAT2A 3'UTR stem loop A", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02260" | |
} | |
] | |
}, | |
"RF02261": { | |
"AC": "RF02261", | |
"ID": "MAT2A_B", | |
"DE": "MAT2A 3'UTR stem loop B", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02261" | |
} | |
] | |
}, | |
"RF02262": { | |
"AC": "RF02262", | |
"ID": "MAT2A_C", | |
"DE": "MAT2A 3'UTR stem loop C", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02262" | |
} | |
] | |
}, | |
"RF02263": { | |
"AC": "RF02263", | |
"ID": "MAT2A_D", | |
"DE": "MAT2A 3'UTR stem loop D", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02263" | |
} | |
] | |
}, | |
"RF02264": { | |
"AC": "RF02264", | |
"ID": "MAT2A_E", | |
"DE": "MAT2A 3'UTR stem loop E", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02264" | |
} | |
] | |
}, | |
"RF02265": { | |
"AC": "RF02265", | |
"ID": "MAT2A_F", | |
"DE": "MAT2A 3'UTR stem loop F", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02265" | |
} | |
] | |
}, | |
"RF02266": { | |
"AC": "RF02266", | |
"ID": "XIST_intron", | |
"DE": "XIST 3' intron conserved motif", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "XIST 3' intron conserved motif" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02266" | |
} | |
] | |
}, | |
"RF02267": { | |
"AC": "RF02267", | |
"ID": "Vax2os1_2", | |
"DE": "Vax2os1 conserved region 2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Vax2os1 conserved region 2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02267" | |
} | |
] | |
}, | |
"RF02268": { | |
"AC": "RF02268", | |
"ID": "MtlS", | |
"DE": "MtlS RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "MtlS RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02268" | |
} | |
] | |
}, | |
"RF02269": { | |
"AC": "RF02269", | |
"ID": "HPnc0580", | |
"DE": "Heliobacter pylori small RNA HPnc0580", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Heliobacter pylori small RNA HPnc0580" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02269" | |
} | |
] | |
}, | |
"RF02270": { | |
"AC": "RF02270", | |
"ID": "nse_sRNA", | |
"DE": "Neisseria sigma-E sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Neisseria sigma-E sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02270" | |
} | |
] | |
}, | |
"RF02271": { | |
"AC": "RF02271", | |
"ID": "uc_338", | |
"DE": "TUC338", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02271" | |
} | |
] | |
}, | |
"RF02272": { | |
"AC": "RF02272", | |
"ID": "Vax2os1_3", | |
"DE": "Vax2os1 conserved region 3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "lncRNA" | |
}, | |
{ | |
"product": "Vax2os1 conserved region 3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02272" | |
} | |
] | |
}, | |
"RF02273": { | |
"AC": "RF02273", | |
"ID": "FsrA", | |
"DE": "FsrA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "FsrA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02273" | |
} | |
] | |
}, | |
"RF02274": { | |
"AC": "RF02274", | |
"ID": "AniS", | |
"DE": "AniS", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "AniS" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02274" | |
} | |
] | |
}, | |
"RF02275": { | |
"AC": "RF02275", | |
"ID": "Hammerhead_HH9", | |
"DE": "Hammerhead ribozyme HH9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Hammerhead ribozyme HH9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02275" | |
} | |
] | |
}, | |
"RF02276": { | |
"AC": "RF02276", | |
"ID": "Hammerhead_II", | |
"DE": "Hammerhead ribozyme (type II)", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Hammerhead ribozyme (type II)" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02276" | |
} | |
] | |
}, | |
"RF02277": { | |
"AC": "RF02277", | |
"ID": "Hammerhead_HH10", | |
"DE": "Hammerhead ribozyme HH10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "Hammerhead ribozyme HH10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02277" | |
} | |
] | |
}, | |
"RF02278": { | |
"AC": "RF02278", | |
"ID": "Betaproteobacteria_toxic_sRNA", | |
"DE": "Betaproteobacteria toxic small RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Betaproteobacteria toxic small RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02278" | |
} | |
] | |
}, | |
"RF02279": { | |
"AC": "RF02279", | |
"ID": "TtnuCD1", | |
"DE": "Tetrahymena snoRNA TtnuCD1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02279" | |
} | |
] | |
}, | |
"RF02280": { | |
"AC": "RF02280", | |
"ID": "TtnuCD3", | |
"DE": "Tetrahymena snoRNA TtnuCD3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02280" | |
} | |
] | |
}, | |
"RF02281": { | |
"AC": "RF02281", | |
"ID": "TtnuCD4", | |
"DE": "Tetrahymena snoRNA TtnuCD4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02281" | |
} | |
] | |
}, | |
"RF02282": { | |
"AC": "RF02282", | |
"ID": "TtnuCD5", | |
"DE": "Tetrahymena snoRNA TtnuCD5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02282" | |
} | |
] | |
}, | |
"RF02283": { | |
"AC": "RF02283", | |
"ID": "TtnuCD6", | |
"DE": "Tetrahymena snoRNA TtnuCD6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02283" | |
} | |
] | |
}, | |
"RF02284": { | |
"AC": "RF02284", | |
"ID": "TtnuCD7", | |
"DE": "Tetrahymena snoRNA TtnuCD7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02284" | |
} | |
] | |
}, | |
"RF02285": { | |
"AC": "RF02285", | |
"ID": "TtnuCD8", | |
"DE": "Tetrahymena snoRNA TtnuCD8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02285" | |
} | |
] | |
}, | |
"RF02286": { | |
"AC": "RF02286", | |
"ID": "TtnuCD9", | |
"DE": "Tetrahymena snoRNA TtnuCD9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02286" | |
} | |
] | |
}, | |
"RF02287": { | |
"AC": "RF02287", | |
"ID": "TtnuCD10", | |
"DE": "Tetrahymena snoRNA TtnuCD10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02287" | |
} | |
] | |
}, | |
"RF02288": { | |
"AC": "RF02288", | |
"ID": "TtnuCD11", | |
"DE": "Tetrahymena snoRNA TtnuCD11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02288" | |
} | |
] | |
}, | |
"RF02289": { | |
"AC": "RF02289", | |
"ID": "TtnuCD13", | |
"DE": "Tetrahymena snoRNA TtnuCD13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02289" | |
} | |
] | |
}, | |
"RF02290": { | |
"AC": "RF02290", | |
"ID": "TtnuCD14", | |
"DE": "Tetrahymena snoRNA TtnuCD14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02290" | |
} | |
] | |
}, | |
"RF02291": { | |
"AC": "RF02291", | |
"ID": "TtnuCD15", | |
"DE": "Tetrahymena snoRNA TtnuCD15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02291" | |
} | |
] | |
}, | |
"RF02292": { | |
"AC": "RF02292", | |
"ID": "TtnuCD16", | |
"DE": "Tetrahymena snoRNA TtnuCD16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02292" | |
} | |
] | |
}, | |
"RF02293": { | |
"AC": "RF02293", | |
"ID": "TtnuCD17", | |
"DE": "Tetrahymena snoRNA TtnuCD17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02293" | |
} | |
] | |
}, | |
"RF02294": { | |
"AC": "RF02294", | |
"ID": "TtnuCD18", | |
"DE": "Tetrahymena snoRNA TtnuCD18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02294" | |
} | |
] | |
}, | |
"RF02295": { | |
"AC": "RF02295", | |
"ID": "TtnuCD19", | |
"DE": "Tetrahymena snoRNA TtnuCD19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02295" | |
} | |
] | |
}, | |
"RF02296": { | |
"AC": "RF02296", | |
"ID": "TtnuCD20", | |
"DE": "Tetrahymena snoRNA TtnuCD20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02296" | |
} | |
] | |
}, | |
"RF02297": { | |
"AC": "RF02297", | |
"ID": "TtnuCD21", | |
"DE": "Tetrahymena snoRNA TtnuCD21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02297" | |
} | |
] | |
}, | |
"RF02298": { | |
"AC": "RF02298", | |
"ID": "TtnuCD22", | |
"DE": "Tetrahymena snoRNA TtnuCD22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02298" | |
} | |
] | |
}, | |
"RF02299": { | |
"AC": "RF02299", | |
"ID": "TtnuCD23", | |
"DE": "Tetrahymena snoRNA TtnuCD23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02299" | |
} | |
] | |
}, | |
"RF02300": { | |
"AC": "RF02300", | |
"ID": "TtnuCD24", | |
"DE": "Tetrahymena snoRNA TtnuCD24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02300" | |
} | |
] | |
}, | |
"RF02301": { | |
"AC": "RF02301", | |
"ID": "TtnuCD25", | |
"DE": "Tetrahymena snoRNA TtnuCD25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02301" | |
} | |
] | |
}, | |
"RF02302": { | |
"AC": "RF02302", | |
"ID": "TtnuCD26", | |
"DE": "Tetrahymena snoRNA TtnuCD26", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD26" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02302" | |
} | |
] | |
}, | |
"RF02303": { | |
"AC": "RF02303", | |
"ID": "TtnuCD28", | |
"DE": "Tetrahymena snoRNA TtnuCD28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02303" | |
} | |
] | |
}, | |
"RF02304": { | |
"AC": "RF02304", | |
"ID": "TtnuCD29", | |
"DE": "Tetrahymena snoRNA TtnuCD29", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD29" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02304" | |
} | |
] | |
}, | |
"RF02305": { | |
"AC": "RF02305", | |
"ID": "TtnuCD31", | |
"DE": "Tetrahymena snoRNA TtnuCD31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02305" | |
} | |
] | |
}, | |
"RF02306": { | |
"AC": "RF02306", | |
"ID": "TtnuCD32", | |
"DE": "Tetrahymena snoRNA TtnuCD32", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD32" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02306" | |
} | |
] | |
}, | |
"RF02307": { | |
"AC": "RF02307", | |
"ID": "TtnuCD33", | |
"DE": "Tetrahymena snoRNA TtnuCD33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02307" | |
} | |
] | |
}, | |
"RF02308": { | |
"AC": "RF02308", | |
"ID": "TtnuCD34", | |
"DE": "Tetrahymena snoRNA TtnuCD34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuCD34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02308" | |
} | |
] | |
}, | |
"RF02309": { | |
"AC": "RF02309", | |
"ID": "TtnuHACA1", | |
"DE": "Tetrahymena snoRNA TtnuHACA1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02309" | |
} | |
] | |
}, | |
"RF02310": { | |
"AC": "RF02310", | |
"ID": "TtnuHACA2", | |
"DE": "Tetrahymena snoRNA TtnuHACA2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02310" | |
} | |
] | |
}, | |
"RF02311": { | |
"AC": "RF02311", | |
"ID": "TtnuHACA3", | |
"DE": "Tetrahymena snoRNA TtnuHACA3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02311" | |
} | |
] | |
}, | |
"RF02312": { | |
"AC": "RF02312", | |
"ID": "TtnuHACA5", | |
"DE": "Tetrahymena snoRNA TtnuHACA5", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA5" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02312" | |
} | |
] | |
}, | |
"RF02313": { | |
"AC": "RF02313", | |
"ID": "TtnuHACA6", | |
"DE": "Tetrahymena snoRNA TtnuHACA6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02313" | |
} | |
] | |
}, | |
"RF02314": { | |
"AC": "RF02314", | |
"ID": "TtnuHACA7", | |
"DE": "Tetrahymena snoRNA TtnuHACA7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02314" | |
} | |
] | |
}, | |
"RF02315": { | |
"AC": "RF02315", | |
"ID": "TtnuHACA8", | |
"DE": "Tetrahymena snoRNA TtnuHACA8", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA8" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02315" | |
} | |
] | |
}, | |
"RF02316": { | |
"AC": "RF02316", | |
"ID": "TtnuHACA9", | |
"DE": "Tetrahymena snoRNA TtnuHACA9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02316" | |
} | |
] | |
}, | |
"RF02317": { | |
"AC": "RF02317", | |
"ID": "TtnuHACA10", | |
"DE": "Tetrahymena snoRNA TtnuHACA10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02317" | |
} | |
] | |
}, | |
"RF02318": { | |
"AC": "RF02318", | |
"ID": "TtnuHACA11a", | |
"DE": "Tetrahymena snoRNA TtnuHACA11a", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA11a" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02318" | |
} | |
] | |
}, | |
"RF02319": { | |
"AC": "RF02319", | |
"ID": "TtnuHACA12", | |
"DE": "Tetrahymena snoRNA TtnuHACA12", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA12" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02319" | |
} | |
] | |
}, | |
"RF02320": { | |
"AC": "RF02320", | |
"ID": "TtnuHACA13", | |
"DE": "Tetrahymena snoRNA TtnuHACA13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02320" | |
} | |
] | |
}, | |
"RF02321": { | |
"AC": "RF02321", | |
"ID": "TtnuHACA14", | |
"DE": "Tetrahymena snoRNA TtnuHACA14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02321" | |
} | |
] | |
}, | |
"RF02322": { | |
"AC": "RF02322", | |
"ID": "TtnuHACA15", | |
"DE": "Tetrahymena snoRNA TtnuHACA15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02322" | |
} | |
] | |
}, | |
"RF02323": { | |
"AC": "RF02323", | |
"ID": "TtnuHACA16", | |
"DE": "Tetrahymena snoRNA TtnuHACA16", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA16" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02323" | |
} | |
] | |
}, | |
"RF02324": { | |
"AC": "RF02324", | |
"ID": "TtnuHACA17", | |
"DE": "Tetrahymena snoRNA TtnuHACA17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02324" | |
} | |
] | |
}, | |
"RF02325": { | |
"AC": "RF02325", | |
"ID": "TtnuHACA18", | |
"DE": "Tetrahymena snoRNA TtnuHACA18", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA18" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02325" | |
} | |
] | |
}, | |
"RF02326": { | |
"AC": "RF02326", | |
"ID": "TtnuHACA19", | |
"DE": "Tetrahymena snoRNA TtnuHACA19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02326" | |
} | |
] | |
}, | |
"RF02327": { | |
"AC": "RF02327", | |
"ID": "TtnuHACA20", | |
"DE": "Tetrahymena snoRNA TtnuHACA20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02327" | |
} | |
] | |
}, | |
"RF02328": { | |
"AC": "RF02328", | |
"ID": "TtnuHACA21", | |
"DE": "Tetrahymena snoRNA TtnuHACA21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02328" | |
} | |
] | |
}, | |
"RF02329": { | |
"AC": "RF02329", | |
"ID": "TtnuHACA22", | |
"DE": "Tetrahymena snoRNA TtnuHACA22", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA22" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02329" | |
} | |
] | |
}, | |
"RF02330": { | |
"AC": "RF02330", | |
"ID": "TtnuHACA23", | |
"DE": "Tetrahymena snoRNA TtnuHACA23", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA23" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02330" | |
} | |
] | |
}, | |
"RF02331": { | |
"AC": "RF02331", | |
"ID": "TtnuHACA24", | |
"DE": "Tetrahymena snoRNA TtnuHACA24", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA24" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02331" | |
} | |
] | |
}, | |
"RF02332": { | |
"AC": "RF02332", | |
"ID": "TtnuHACA25", | |
"DE": "Tetrahymena snoRNA TtnuHACA25", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA25" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02332" | |
} | |
] | |
}, | |
"RF02333": { | |
"AC": "RF02333", | |
"ID": "TtnuHACA27", | |
"DE": "Tetrahymena snoRNA TtnuHACA27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02333" | |
} | |
] | |
}, | |
"RF02334": { | |
"AC": "RF02334", | |
"ID": "TtnuHACA28", | |
"DE": "Tetrahymena snoRNA TtnuHACA28", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Tetrahymena snoRNA TtnuHACA28" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02334" | |
} | |
] | |
}, | |
"RF02335": { | |
"AC": "RF02335", | |
"ID": "GlsR2_miR4", | |
"DE": "Giardia snoRNA GlsR2/miRNA miR4", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Giardia snoRNA GlsR2/miRNA miR4" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02335" | |
} | |
] | |
}, | |
"RF02336": { | |
"AC": "RF02336", | |
"ID": "GlsR1_miR6", | |
"DE": "Giardia snoRNA GlsR1/miRNA miR6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Giardia snoRNA GlsR1/miRNA miR6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02336" | |
} | |
] | |
}, | |
"RF02337": { | |
"AC": "RF02337", | |
"ID": "GlsR8_miR10", | |
"DE": "Giardia snoRNA GlsR8/miRNA miR10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Giardia snoRNA GlsR8/miRNA miR10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02337" | |
} | |
] | |
}, | |
"RF02338": { | |
"AC": "RF02338", | |
"ID": "GlsR16_miR3", | |
"DE": "Giardia snoRNA GlsR16//miRNA miR3", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Giardia snoRNA GlsR16//miRNA miR3" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02338" | |
} | |
] | |
}, | |
"RF02339": { | |
"AC": "RF02339", | |
"ID": "GlsR17_miR2", | |
"DE": "Giardia snoRNA GlsR17/miRNA miR2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "miRNA" | |
}, | |
{ | |
"product": "Giardia snoRNA GlsR17/miRNA miR2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02339" | |
} | |
] | |
}, | |
"RF02340": { | |
"AC": "RF02340", | |
"ID": "DENV_SLA", | |
"DE": "Dengue virus SLA", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02340" | |
} | |
] | |
}, | |
"RF02341": { | |
"AC": "RF02341", | |
"ID": "ncrMT1302", | |
"DE": "Mycobacterium sRNA ncrMT1302", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Mycobacterium sRNA ncrMT1302" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02341" | |
} | |
] | |
}, | |
"RF02342": { | |
"AC": "RF02342", | |
"ID": "ar7", | |
"DE": "Alphaproteobacterial sRNA ar7", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial sRNA ar7" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02342" | |
} | |
] | |
}, | |
"RF02343": { | |
"AC": "RF02343", | |
"ID": "ar9", | |
"DE": "Alphaproteobacterial sRNA ar9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial sRNA ar9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02343" | |
} | |
] | |
}, | |
"RF02344": { | |
"AC": "RF02344", | |
"ID": "ar14", | |
"DE": "Alphaproteobacterial ar14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial ar14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02344" | |
} | |
] | |
}, | |
"RF02345": { | |
"AC": "RF02345", | |
"ID": "ar15", | |
"DE": "Alphaproteobacterial ar15", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial ar15" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02345" | |
} | |
] | |
}, | |
"RF02346": { | |
"AC": "RF02346", | |
"ID": "ar35", | |
"DE": "Alphaproteobacterial sRNA ar35", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial sRNA ar35" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02346" | |
} | |
] | |
}, | |
"RF02347": { | |
"AC": "RF02347", | |
"ID": "ar45", | |
"DE": "Alphaproteobacterial sRNA ar45", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial sRNA ar45" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02347" | |
} | |
] | |
}, | |
"RF02348": { | |
"AC": "RF02348", | |
"ID": "tracrRNA", | |
"DE": "Trans-activating crRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Trans-activating crRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02348" | |
} | |
] | |
}, | |
"RF02349": { | |
"AC": "RF02349", | |
"ID": "psRNA2", | |
"DE": "Proteobacterial sRNA psRNA2", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacterial sRNA psRNA2" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02349" | |
} | |
] | |
}, | |
"RF02350": { | |
"AC": "RF02350", | |
"ID": "psRNA6", | |
"DE": "Nitrosomonas sRNA psRNA6", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Nitrosomonas sRNA psRNA6" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02350" | |
} | |
] | |
}, | |
"RF02351": { | |
"AC": "RF02351", | |
"ID": "psRNA14", | |
"DE": "Proteobacteria sRNA psRNA14", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Proteobacteria sRNA psRNA14" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02351" | |
} | |
] | |
}, | |
"RF02353": { | |
"AC": "RF02353", | |
"ID": "BjrC68", | |
"DE": "Bradyrhizobiaceae sRNA BjrC68", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bradyrhizobiaceae sRNA BjrC68" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02353" | |
} | |
] | |
}, | |
"RF02354": { | |
"AC": "RF02354", | |
"ID": "BjrC80", | |
"DE": "Bradyrhizobiaceae sRNA BjrC80", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bradyrhizobiaceae sRNA BjrC80" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02354" | |
} | |
] | |
}, | |
"RF02355": { | |
"AC": "RF02355", | |
"ID": "BjrC174", | |
"DE": "Bradyrhizobiaceae sRNA BjrC174", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Bradyrhizobiaceae sRNA BjrC174" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02355" | |
} | |
] | |
}, | |
"RF02356": { | |
"AC": "RF02356", | |
"ID": "BjrC1505", | |
"DE": "Alphaproteobacterial sRNA BjrC1505", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Alphaproteobacterial sRNA BjrC1505" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02356" | |
} | |
] | |
}, | |
"RF02357": { | |
"AC": "RF02357", | |
"ID": "RNaseP-T", | |
"DE": "RNaseP truncated form", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "ribozyme" | |
}, | |
{ | |
"product": "RNaseP truncated form" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02357" | |
} | |
] | |
}, | |
"RF02358": { | |
"AC": "RF02358", | |
"ID": "hsp17", | |
"DE": "Hsp17 thermometer", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02358" | |
} | |
] | |
}, | |
"RF02359": { | |
"AC": "RF02359", | |
"ID": "MS2", | |
"DE": "Bacteriophage MS2 operator hairpin", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02359" | |
} | |
] | |
}, | |
"RF02360": { | |
"AC": "RF02360", | |
"ID": "Yfr8", | |
"DE": "Cyanobacterial functional RNA 8/9", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 8/9" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02360" | |
} | |
] | |
}, | |
"RF02362": { | |
"AC": "RF02362", | |
"ID": "Yfr10", | |
"DE": "Cyanobacterial functional RNA 10", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 10" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02362" | |
} | |
] | |
}, | |
"RF02363": { | |
"AC": "RF02363", | |
"ID": "Yfr11", | |
"DE": "Cyanobacterial functional RNA 11", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 11" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02363" | |
} | |
] | |
}, | |
"RF02364": { | |
"AC": "RF02364", | |
"ID": "Yfr13", | |
"DE": "Cyanobacterial functional RNA 13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02364" | |
} | |
] | |
}, | |
"RF02365": { | |
"AC": "RF02365", | |
"ID": "Yfr17", | |
"DE": "Cyanobacterial functional RNA 17", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 17" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02365" | |
} | |
] | |
}, | |
"RF02366": { | |
"AC": "RF02366", | |
"ID": "Yfr19", | |
"DE": "Cyanobacterial functional RNA 19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02366" | |
} | |
] | |
}, | |
"RF02367": { | |
"AC": "RF02367", | |
"ID": "Yfr20", | |
"DE": "Cyanobacterial functional RNA 20", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 20" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02367" | |
} | |
] | |
}, | |
"RF02368": { | |
"AC": "RF02368", | |
"ID": "Yfr21", | |
"DE": "Cyanobacterial functional RNA 21", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cyanobacterial functional RNA 21" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02368" | |
} | |
] | |
}, | |
"RF02369": { | |
"AC": "RF02369", | |
"ID": "h2cR", | |
"DE": "h2cR sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "h2cR sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02369" | |
} | |
] | |
}, | |
"RF02370": { | |
"AC": "RF02370", | |
"ID": "Trp_leader_2", | |
"DE": "Bacillus tryptophan operon leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02370" | |
} | |
] | |
}, | |
"RF02371": { | |
"AC": "RF02371", | |
"ID": "PyrG_leader", | |
"DE": "PyrG leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02371" | |
} | |
] | |
}, | |
"RF02372": { | |
"AC": "RF02372", | |
"ID": "PyrC_leader", | |
"DE": "PyrC leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02372" | |
} | |
] | |
}, | |
"RF02373": { | |
"AC": "RF02373", | |
"ID": "PyrD_leader", | |
"DE": "PyrD leader", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02373" | |
} | |
] | |
}, | |
"RF02374": { | |
"AC": "RF02374", | |
"ID": "YenS", | |
"DE": "Yersinia YenS sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Yersinia YenS sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02374" | |
} | |
] | |
}, | |
"RF02375": { | |
"AC": "RF02375", | |
"ID": "Aar", | |
"DE": "Aar sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Aar sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02375" | |
} | |
] | |
}, | |
"RF02376": { | |
"AC": "RF02376", | |
"ID": "SR1", | |
"DE": "SR1 sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SR1 sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02376" | |
} | |
] | |
}, | |
"RF02377": { | |
"AC": "RF02377", | |
"ID": "SurA", | |
"DE": "SurA sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SurA sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02377" | |
} | |
] | |
}, | |
"RF02378": { | |
"AC": "RF02378", | |
"ID": "SurC", | |
"DE": "SurC sRNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "SurC sRNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02378" | |
} | |
] | |
}, | |
"RF02379": { | |
"AC": "RF02379", | |
"ID": "csRNA", | |
"DE": "Cia-dependent small RNA csRNA1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Cia-dependent small RNA csRNA1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02379" | |
} | |
] | |
}, | |
"RF02384": { | |
"AC": "RF02384", | |
"ID": "FasX", | |
"DE": "FasX small RNA", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "FasX small RNA" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02384" | |
} | |
] | |
}, | |
"RF02385": { | |
"AC": "RF02385", | |
"ID": "sau-13", | |
"DE": "Staphylococcus sRNA sau-13", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-13" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02385" | |
} | |
] | |
}, | |
"RF02386": { | |
"AC": "RF02386", | |
"ID": "sau-19", | |
"DE": "Staphylococcus sRNA sau-19", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-19" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02386" | |
} | |
] | |
}, | |
"RF02387": { | |
"AC": "RF02387", | |
"ID": "sau-27", | |
"DE": "Staphylococcus sRNA sau-27", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-27" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02387" | |
} | |
] | |
}, | |
"RF02388": { | |
"AC": "RF02388", | |
"ID": "sau-30", | |
"DE": "Staphylococcus sRNA sau-30", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-30" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02388" | |
} | |
] | |
}, | |
"RF02389": { | |
"AC": "RF02389", | |
"ID": "sau-31", | |
"DE": "Staphylococcus sRNA sau-31", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-31" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02389" | |
} | |
] | |
}, | |
"RF02390": { | |
"AC": "RF02390", | |
"ID": "sau-41", | |
"DE": "Staphylococcus sRNA sau-41", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-41" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02390" | |
} | |
] | |
}, | |
"RF02391": { | |
"AC": "RF02391", | |
"ID": "sau-50", | |
"DE": "Staphylococcus sRNA sau-50", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-50" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02391" | |
} | |
] | |
}, | |
"RF02392": { | |
"AC": "RF02392", | |
"ID": "sau-53", | |
"DE": "Staphylococcus sRNA sau-53", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-53" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02392" | |
} | |
] | |
}, | |
"RF02393": { | |
"AC": "RF02393", | |
"ID": "sau-59", | |
"DE": "Staphylococcus sRNA sau-59", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-59" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02393" | |
} | |
] | |
}, | |
"RF02394": { | |
"AC": "RF02394", | |
"ID": "sau-63", | |
"DE": "Staphylococcus sRNA sau-63", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-63" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02394" | |
} | |
] | |
}, | |
"RF02395": { | |
"AC": "RF02395", | |
"ID": "sau-66", | |
"DE": "Staphylococcus sRNA sau-66", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-66" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02395" | |
} | |
] | |
}, | |
"RF02396": { | |
"AC": "RF02396", | |
"ID": "sau-5949", | |
"DE": "Staphylococcus sRNA sau-5949", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-5949" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02396" | |
} | |
] | |
}, | |
"RF02397": { | |
"AC": "RF02397", | |
"ID": "sau-5971", | |
"DE": "Staphylococcus sRNA sau-5971", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-5971" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02397" | |
} | |
] | |
}, | |
"RF02398": { | |
"AC": "RF02398", | |
"ID": "sau-6072", | |
"DE": "Staphylococcus sRNA sau-6072", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Staphylococcus sRNA sau-6072" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02398" | |
} | |
] | |
}, | |
"RF02399": { | |
"AC": "RF02399", | |
"ID": "NsiR1", | |
"DE": "Nitrogen stress-induced RNA 1", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Nitrogen stress-induced RNA 1" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02399" | |
} | |
] | |
}, | |
"RF02400": { | |
"AC": "RF02400", | |
"ID": "Hsp83_3_UTR", | |
"DE": "Heat shock protein 83 3' UTR", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02400" | |
} | |
] | |
}, | |
"RF02401": { | |
"AC": "RF02401", | |
"ID": "ClpQY_promoter", | |
"DE": "ClpQY promoter", | |
"feature": "regulatory", | |
"qualifiers": [ | |
{ | |
"regulatory_class": "other" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02401" | |
} | |
] | |
}, | |
"RF02402": { | |
"AC": "RF02402", | |
"ID": "Afu_263", | |
"DE": "A. fumigatus snoRNA Afu_263", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_263" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02402" | |
} | |
] | |
}, | |
"RF02403": { | |
"AC": "RF02403", | |
"ID": "Afu_328", | |
"DE": "A. fumigatus snoRNA Afu_328", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "A. fumigatus snoRNA Afu_328" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02403" | |
} | |
] | |
}, | |
"RF02404": { | |
"AC": "RF02404", | |
"ID": "P33", | |
"DE": "Pseudomonas sRNA P33", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P33" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02404" | |
} | |
] | |
}, | |
"RF02405": { | |
"AC": "RF02405", | |
"ID": "P34", | |
"DE": "Pseudomonas sRNA P34", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "other" | |
}, | |
{ | |
"product": "Pseudomonas sRNA P34" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02405" | |
} | |
] | |
}, | |
"RF02406": { | |
"AC": "RF02406", | |
"ID": "snoR120", | |
"DE": "Small nucleolar RNA snoR120", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
"product": "Small nucleolar RNA snoR120" | |
}, | |
{ | |
"inference": "COORDINATES:profile:Infernal:1.1" | |
}, | |
{ | |
"inference": "nucleotide motif:Rfam:RF02406" | |
} | |
] | |
}, | |
"RF02407": { | |
"AC": "RF02407", | |
"ID": "snoR122", | |
"DE": "Small nucleolar RNA snoR122", | |
"feature": "ncRNA", | |
"qualifiers": [ | |
{ | |
"ncRNA_class": "snoRNA" | |
}, | |
{ | |
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