Matt McCormick thewtex

## itk-dask-blogpost.ipynb

      
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                thewtex
                / itk-dask-blogpost.ipynb
            
            
              Created
              March 3, 2023 12:43
                — forked from GenevieveBuckley/itk-dask-blogpost.ipynb
            
              
                ITK + Dask notebooks (August 2022)
              
          
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## README.md

      
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                thewtex
                / README.md
            
            
              Last active
              January 19, 2018 21:33
                — forked from juanpabloaj/README.md
            
              
                Total of pip packages downloaded, separated by Python versions
              
          
    Total of pip packages downloaded separated by Python versions

From September 26, 2017 to November 31, 2017.
Python versions from 2.6 to 3.6


## githubprivatereposetup.md

      
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                thewtex
                / githubprivatereposetup.md
            
            
              Created
              November 15, 2017 22:58
                — forked from shivarajp/githubprivatereposetup.md
            
              
                Jenkins Github private repository credentials setup
              
          
    I just had to set up Jenkins to use GitHub. My notes (to myself, mostly):
Detailed Instructions
For setting up Jenkins to build GitHub projects. This assumes some ability to manage Jenkins, use the command line, set up a utility LDAP account, etc. Please share or improve this Gist as needed.
Install Jenkins Plugins
get both the git and github plugin
http://wiki.jenkins-ci.org/display/JENKINS/Git+Plugin

  
## transfer.fish
function transfer
    if test (count $argv) -eq 0
        echo "No arguments specified. Usage:\necho transfer /tmp/test.md\ncat /tmp/test.md | transfer test.md"
        return 1
    end

    ## get temporarily filename, output is written to this file show progress can be showed
    set tmpfile ( mktemp -t transferXXX )

    ## upload stdin or file

## Registration.hpp
#ifndef _Registration_hpp
#define _Registration_hpp

#include <iostream>
//#include "Types.hpp"

#include <itkImageRegistrationMethod.h>
#include <itkTranslationTransform.h>
#include <itkMeanSquaresImageToImageMetric.h>
#include <itkLinearInterpolateImageFunction.h>

## CMakeLists.txt
cmake_minimum_required( VERSION 2.8 )

project( Registration )

find_package( ITK REQUIRED )
include( ${ITK_USE_FILE} )

include_directories( ${CMAKE_CURRENT_SOURCE_DIR} )

add_executable( ${PROJECT_NAME} main.cpp )

## configureEmscripten.sh
cmake \
-DITK_BUILD_DEFAULT_MODULES:BOOL=OFF \
-DBUILD_TESTING:BOOL=OFF \
-DBUILD_EXAMPLES:BOOL=OFF \
-DITKGroup_Core:BOOL=OFF \
-DModule_ITKCommon:BOOL=ON \
-DCMAKE_SIZEOF_UNSIGNED_SHORT=2   \
-DCMAKE_TOOLCHAIN_FILE=/home/ibanez/src/emscripten/cmake/Platform/Emscripten.cmake -DCMAKE_BUILD_TYPE=Debug -G "Unix Makefiles"  ~/src/ITK

## ipnbdoctest.py
#!/usr/bin/env python
"""
simple example script for running and testing notebooks.

Usage: `ipnbdoctest.py foo.ipynb [bar.ipynb [...]]`

Each cell is submitted to the kernel, and the outputs are compared with those stored in the notebook.
"""

import os,sys,time
	function transfer
	if test (count $argv) -eq 0
	echo "No arguments specified. Usage:\necho transfer /tmp/test.md\ncat /tmp/test.md \| transfer test.md"
	return 1
	end

	## get temporarily filename, output is written to this file show progress can be showed
	set tmpfile ( mktemp -t transferXXX )

	## upload stdin or file
	#ifndef _Registration_hpp
	#define _Registration_hpp

	#include <iostream>
	//#include "Types.hpp"

	#include <itkImageRegistrationMethod.h>
	#include <itkTranslationTransform.h>
	#include <itkMeanSquaresImageToImageMetric.h>
	#include <itkLinearInterpolateImageFunction.h>
	cmake_minimum_required( VERSION 2.8 )

	project( Registration )

	find_package( ITK REQUIRED )
	include( ${ITK_USE_FILE} )

	include_directories( ${CMAKE_CURRENT_SOURCE_DIR} )

	add_executable( ${PROJECT_NAME} main.cpp )
	cmake \
	-DITK_BUILD_DEFAULT_MODULES:BOOL=OFF \
	-DBUILD_TESTING:BOOL=OFF \
	-DBUILD_EXAMPLES:BOOL=OFF \
	-DITKGroup_Core:BOOL=OFF \
	-DModule_ITKCommon:BOOL=ON \
	-DCMAKE_SIZEOF_UNSIGNED_SHORT=2 \
	-DCMAKE_TOOLCHAIN_FILE=/home/ibanez/src/emscripten/cmake/Platform/Emscripten.cmake -DCMAKE_BUILD_TYPE=Debug -G "Unix Makefiles" ~/src/ITK
	#!/usr/bin/env python
	"""
	simple example script for running and testing notebooks.

	Usage: `ipnbdoctest.py foo.ipynb [bar.ipynb [...]]`

	Each cell is submitted to the kernel, and the outputs are compared with those stored in the notebook.
	"""

	import os,sys,time