thinkerbot

Summary

Many types of functions produce data amenable for charting in the xy dimensions. These functions are defined as f(x[n]) = y. To transform this function into an f(x) = y function, provide a projection that takes a set of (x[n], y) values and picks a single (x,y) pair. In practice the set (x[n], y) values must be limited to fit within memory/runtime bounds... ergo for a given x there must be a limited number of x[n-1].

In summary a projection can produce xy data from x[n]y data provided:

• there is one value y for each (x[n])
• the number of x[n-1] is limited for a given x

Many types of data end up satisfying these conditions, in particular measurement data. Measurement data can be modeled as ty. If measurement data can be overridden then add a dimension to track when the data was recieved, ie tty.

thinkerbot

  x, y = 0, 0
  xmin, xmax, ymin, ymax = 0, 0, 0, 0
  e = Enumerator.new do |yy|
    loop do
      while x > xmin
        yy << [x, y]
        x -= 1
      end
      xmin -= 1
      while y < ymax

thinkerbot

# = Description
# A load time profiler script, useful for identifying requires
# that slow down the loading of a script.  
#
# Oftentimes we use but don't always need what we require in 
# scripts.  This can dramatically slow load times, which can be
# annoying.  Use this script to identify slow-loading parts of
# a script and then consider using autoloading to defer
# the require until you really need it.
#

thinkerbot

#!/usr/bin/env ruby

################################################################
# A basic cgi script.  To run, set up the following:
#
#  /dir
#  |- cgi-bin
#  |   `- this_script.cgi
#  `- the_webrick_script.rb
#

thinkerbot

//////////////////////////////////////////////////////////////////////////////
//
// RedirectHttp
// 
// Note Ubiquity makes these objects available (the list is incomplete, but
// contains the objects that are used in this script):
//
// - Application:: the FUEL[http://developer.mozilla.org/en/FUEL] Application object
// - CmdUtils:: Ubiquity command utilities
//

thinkerbot

# These are a number of tasks to calculate peptide masses
# using a variety of algorithms.  The intent is to find
# the algorithm used by Mascot to calculate peptide mass.
# 
# Correct algorithm: unknown
# Dependencies: tap, molecules
#

require 'rubygems'
require 'tap'

thinkerbot

# = Description
#
# SimpleYaml provides methods to dump and load simple configurations.
# Support is limited strings, symbols, booleans, nil, and numbers.  
# Values may include non-nested arrays.  Nested hashes are not 
# supported anywhere.
#
#   include SimpleYaml
#   hash = {
#     :sym => 'str',

thinkerbot

require 'rubygems'
require 'minitest/spec'

module A
  module B
  end
end

class DirectInclude
  include A

thinkerbot

# usage: ruby echo_server.rb
#
# Launches a WEBRick server that echos http requests back.  This can be
# useful when debugging HTTP requests.
#

require 'webrick'

# Setup server configuration
logger = WEBrick::Log.new

thinkerbot

//////////////////////////////////////////////////////////////////////////////
//
// Tap
//
// Note Ubiquity makes these objects available (the list is incomplete, but
// contains the objects that are used in this script):
//
// - Application:: the FUEL[http://developer.mozilla.org/en/FUEL] Application object
// - jQuery:: http://docs.jquery.com/Main_Page
// - Utils:: Ubiquity utilities