140 bytes change making

gistfile1.js

function x(total, values, place) {

    var output = i = 0,
        f = function(i){
            output += (i == total);
        };

    while (place = values[i++]) {
        (function(b,c){
            f = function(a, i){
                for (i = a; i <= total; i += b){
                    c(i);
                }
            };
        })(place, f);
    }
    f(0);
    return output;
}

console.log('total', x(100, [100,50,25,10,5,1]));
//console.log('total', x(100, [1,5,10,25,50,100]));

142 bytes
function x(a,b,c){var d=i=0,e=function(b){d+=b==a};while(c=b[i++])(function(b,c){e=function(d,e){for(e=d;e<=a;e+=b)c(e)}})(c,e);return e(0),d}

function x(a, b, c) {
    var d = i = 0,
        e = function (b) {
            d += b == a
        };
    while (c = b[i++])(function (b, c) {
        e = function (d, e) {
            for (e = d; e <= a; e += b) c(e)
        }
    })(c, e);
    return e(0), d
}