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# | |
/* diff - differential file comparison | |
* | |
* Uses an algorithm due to Harold Stone, which finds | |
* a pair of longest identical subsequences in the two | |
* files. | |
* | |
* The major goal is to generate the match vector J. | |
* J[i] is the index of the line in file1 corresponding | |
* to line i file0. J[i] = 0 if there is no | |
* such line in file1. | |
* | |
* Lines are hashed so as to work in core. All potential | |
* matches are located by sorting the lines of each file | |
* on the hash (called value_____). In particular, this | |
* collects the equivalence classes in file1 together. | |
* Subroutine equiv____ replaces the value of each line in | |
* file0 by the index of the first element of its | |
* matching equivalence in (the reordered) file1. | |
* To save space equiv_____ squeezes file1 into a single | |
* array member______ in which the equivalence classes | |
* are simply concatenated, except that their first | |
* members are flagged by changing sign. | |
* | |
* Next the indices that point into member______ are unsorted_______ into | |
* array class_____ according to the original order of file0. | |
* | |
* The cleverness lies in routine stone______. This marches | |
* through the lines of file0, developing a vector klist_____ | |
* of "k-candidates". At step i a k-candidate is a matched | |
* pair of lines x,y (x in file0 y in file1) such that | |
* there is a common subsequence of lenght k | |
* between the first i lines of file0 and the first y | |
* lines of file1, but there is no such subsequence for | |
* any smaller y. x is the earliest possible mate to y | |
* that occurs in such a subsequence. | |
* | |
* Whenever any of the members of the equivalence class of | |
* lines in file1 matable to a line in file0 has serial number | |
* less than the y of some k-candidate, that k-candidate | |
* with the smallest such y is replaced. The new | |
* k-candidate is chained (via pred____) to the current | |
* k-1 candidate so that the actual subsequence can | |
* be recovered. When a member has serial number greater | |
* that the y of all k-candidates, the klist is extended. | |
* At the end, the longest subsequence is pulled out | |
* and placed in the array J by unravel_______. | |
* | |
* With J in hand, the matches there recorded are | |
* check_____ed against reality to assure that no spurious | |
* matches have crept in due to hashing. If they have, | |
* they are broken, and "jackpot " is recorded--a harmless | |
* matter except that a true match for a spuriously | |
* mated line may now be unnecessarily reported as a change. | |
* | |
* Much of the complexity of the program comes simply | |
* from trying to minimize core utilization and | |
* maximize the range of doable problems by dynamically | |
* allocating what is needed and reusing what is not. | |
* The core requirements for problems larger than somewhat | |
* are (in words) 2*length(file0) + length(file1) + | |
* 3*(number of k-candidates installed), typically about | |
* 6n words for files of length n. | |
*/ | |
#include <stdio.h> | |
#include <ctype.h> | |
#include <sys/types.h> | |
#include <sys/stat.h> | |
#include <signal.h> | |
#include <unistd.h> | |
#include <stdio.h> | |
#include <stdlib.h> | |
#include <fcntl.h> | |
#define prints(s) fputs(s,stdout) | |
#define HALFLONG 16 | |
#define low(x) (x&((1L<<HALFLONG)-1)) | |
#define high(x) (x>>HALFLONG) | |
FILE *input[2]; | |
FILE *fopen(); | |
struct cand { | |
int x; | |
int y; | |
int pred; | |
} cand; | |
struct line { | |
int serial; | |
int value; | |
} *file[2], line; | |
int len[2]; | |
struct line *sfile[2]; /*shortened by pruning common prefix and suffix*/ | |
int slen[2]; | |
int pref, suff; /*length of prefix and suffix*/ | |
int *class; /*will be overlaid on file[0]*/ | |
int *member; /*will be overlaid on file[1]*/ | |
int *klist; /*will be overlaid on file[0] after class*/ | |
struct cand *clist; /* merely a free storage pot for candidates */ | |
int clen = 0; | |
int *J; /*will be overlaid on class*/ | |
long *ixold; /*will be overlaid on klist*/ | |
long *ixnew; /*will be overlaid on file[1]*/ | |
int opt; /* -1,0,1 = -e,normal,-f */ | |
int status = 2; | |
int anychange = 0; | |
char *empty = ""; | |
int bflag; | |
char *tempfile; /*used when comparing against std input*/ | |
char *mktemp(); | |
char *dummy; /*used in resetting storage search ptr*/ | |
void done() | |
{ | |
unlink(tempfile); | |
exit(status); | |
} | |
void mesg(char *s, char *t) | |
{ | |
fprintf(stderr,"diff: %s%s\n",s,t); | |
} | |
void noroom() | |
{ | |
mesg("files too big, try -h\n",empty); | |
done(); | |
} | |
char * talloc(int n) | |
{ | |
char *p; | |
p = (char *) malloc((unsigned)n); | |
if(p!=NULL) | |
return p; | |
noroom(); | |
} | |
char * ralloc(char *p, int n) /*compacting reallocation */ | |
{ | |
char *q; | |
free(p); | |
free(dummy); | |
dummy = malloc(1); | |
q = realloc(p, (unsigned)n); | |
if(q==NULL) | |
noroom(); | |
return q; | |
} | |
/* hashing has the effect of | |
* arranging line in 7-bit bytes and then | |
* summing 1-s complement in 16-bit hunks | |
*/ | |
short readhash(FILE *f) | |
{ | |
long sum; | |
unsigned int shift; | |
int space; | |
int t; | |
sum = 1; | |
space = 0; | |
if(!bflag) for(shift=0;(t=getc(f))!='\n';shift+=7) { | |
if(t==-1) | |
return 0; | |
sum += (long)t << (shift%=HALFLONG); | |
} | |
else for(shift=0;;) { | |
switch(t=getc(f)) { | |
case -1: | |
return 0; | |
case '\t': | |
case ' ': | |
space++; | |
continue; | |
default: | |
if(space) { | |
shift += 7; | |
space = 0; | |
} | |
sum += (long)t << (shift%=HALFLONG); | |
shift += 7; | |
continue; | |
case '\n': | |
break; | |
} | |
break; | |
} | |
sum = low(sum) + high(sum); | |
return (short)low(sum) + (short)high(sum); | |
} | |
void sort(struct line *a, int n) /*shellsort CACM #201*/ | |
{ | |
struct line w; | |
int j,m; | |
struct line *ai; | |
struct line *aim; | |
int k; | |
for(j=1;j<=n;j*= 2) | |
m = 2*j - 1; | |
for(m/=2;m!=0;m/=2) { | |
k = n-m; | |
for(j=1;j<=k;j++) { | |
for(ai = &a[j]; ai > a; ai -= m) { | |
aim = &ai[m]; | |
if(aim < ai) | |
break; /*wraparound*/ | |
if(aim->value > ai[0].value || | |
aim->value == ai[0].value && | |
aim->serial > ai[0].serial) | |
break; | |
w.value = ai[0].value; | |
ai[0].value = aim->value; | |
aim->value = w.value; | |
w.serial = ai[0].serial; | |
ai[0].serial = aim->serial; | |
aim->serial = w.serial; | |
} | |
} | |
} | |
} | |
void unsort(struct line *f, int l, int *b) | |
{ | |
int *a; | |
int i; | |
a = (int *)talloc((l+1)*sizeof(int)); | |
for(i=1;i<=l;i++) | |
a[f[i].serial] = f[i].value; | |
for(i=1;i<=l;i++) | |
b[i] = a[i]; | |
free((char *)a); | |
} | |
void filename(char **pa1, char **pa2) | |
{ | |
char *a1, *b1, *a2; | |
char buf[512]; | |
struct stat stbuf; | |
int i, f; | |
a1 = *pa1; | |
a2 = *pa2; | |
if(stat(a1,&stbuf)!=-1 && ((stbuf.st_mode&S_IFMT)==S_IFDIR)) { | |
b1 = *pa1 = malloc(100); | |
while((*b1++ = *a1++)) ; | |
b1[-1] = '/'; | |
a1 = b1; | |
while((*a1++ = *a2++)) | |
if(*a2 && *a2!='/' && a2[-1]=='/') | |
a1 = b1; | |
} | |
else if(a1[0]=='-'&&a1[1]==0&&tempfile==0) { | |
signal(SIGHUP,done); | |
signal(SIGINT,done); | |
signal(SIGPIPE,done); | |
signal(SIGTERM,done); | |
*pa1 = tempfile = mktemp("/tmp/dXXXXX"); | |
if((f=creat(tempfile,0600)) < 0) { | |
mesg("cannot create ",tempfile); | |
done(); | |
} | |
while((i=read(0,buf,512))>0) | |
write(f,buf,i); | |
close(f); | |
} | |
} | |
void prepare(int i, char *arg) | |
{ | |
struct line *p; | |
int j,h; | |
if((input[i] = fopen(arg,"r")) == NULL){ | |
mesg("cannot open ", arg); | |
done(); | |
} | |
p = (struct line *)talloc(3*sizeof(line)); | |
for(j=0; (h=readhash(input[i]));) { | |
p = (struct line *)ralloc((char *)p,(++j+3)*sizeof(line)); | |
p[j].value = h; | |
} | |
len[i] = j; | |
file[i] = p; | |
fclose(input[i]); | |
} | |
void prune() | |
{ | |
int i,j; | |
for(pref=0;pref<len[0]&&pref<len[1]&& | |
file[0][pref+1].value==file[1][pref+1].value; | |
pref++ ) ; | |
for(suff=0;suff<len[0]-pref&&suff<len[1]-pref&& | |
file[0][len[0]-suff].value==file[1][len[1]-suff].value; | |
suff++) ; | |
for(j=0;j<2;j++) { | |
sfile[j] = file[j]+pref; | |
slen[j] = len[j]-pref-suff; | |
for(i=0;i<=slen[j];i++) | |
sfile[j][i].serial = i; | |
} | |
} | |
void equiv(struct line *a, int n, struct line *b, int m, int *c) | |
{ | |
int i, j; | |
i = j = 1; | |
while(i<=n && j<=m) { | |
if(a[i].value <b[j].value) | |
a[i++].value = 0; | |
else if(a[i].value == b[j].value) | |
a[i++].value = j; | |
else | |
j++; | |
} | |
while(i <= n) | |
a[i++].value = 0; | |
b[m+1].value = 0; | |
j = 0; | |
while(++j <= m) { | |
c[j] = -b[j].serial; | |
while(b[j+1].value == b[j].value) { | |
j++; | |
c[j] = b[j].serial; | |
} | |
} | |
c[j] = -1; | |
} | |
int newcand(int x, int y, int pred) | |
{ | |
struct cand *q; | |
clist = (struct cand *)ralloc((char *)clist,++clen*sizeof(cand)); | |
q = clist + clen -1; | |
q->x = x; | |
q->y = y; | |
q->pred = pred; | |
return clen-1; | |
} | |
int search(int *c, int k, int y) | |
{ | |
int i, j, l; | |
int t; | |
if(clist[c[k]].y<y) /*quick look for typical case*/ | |
return k+1; | |
i = 0; | |
j = k+1; | |
while((l=(i+j)/2) > i) { | |
t = clist[c[l]].y; | |
if(t > y) | |
j = l; | |
else if(t < y) | |
i = l; | |
else | |
return l; | |
} | |
return l+1; | |
} | |
int stone(int *a, int n, int *b, int *c) | |
{ | |
int i, k,y; | |
int j, l; | |
int oldc, tc; | |
int oldl; | |
k = 0; | |
c[0] = newcand(0,0,0); | |
for(i=1; i<=n; i++) { | |
j = a[i]; | |
if(j==0) | |
continue; | |
y = -b[j]; | |
oldl = 0; | |
oldc = c[0]; | |
do { | |
if(y <= clist[oldc].y) | |
continue; | |
l = search(c, k, y); | |
if(l!=oldl+1) | |
oldc = c[l-1]; | |
if(l<=k) { | |
if(clist[c[l]].y <= y) | |
continue; | |
tc = c[l]; | |
c[l] = newcand(i,y,oldc); | |
oldc = tc; | |
oldl = l; | |
} else { | |
c[l] = newcand(i,y,oldc); | |
k++; | |
break; | |
} | |
} while((y=b[++j]) > 0); | |
} | |
return k; | |
} | |
void unravel(int p) | |
{ | |
int i; | |
struct cand *q; | |
for(i=0; i<=len[0]; i++) | |
J[i] = i<=pref ? i: | |
i>len[0]-suff ? i+len[1]-len[0]: | |
0; | |
for(q=clist+p;q->y!=0;q=clist+q->pred) | |
J[q->x+pref] = q->y+pref; | |
} | |
int skipline(int f) | |
{ | |
int i; | |
for(i=1;getc(input[f])!='\n';i++) ; | |
return i; | |
} | |
/* check does double duty: | |
1. ferret out any fortuitous correspondences due | |
to confounding by hashing (which result in "jackpot") | |
2. collect random access indexes to the two files */ | |
void check(char **argv) | |
{ | |
int i, j; | |
int jackpot; | |
long ctold, ctnew; | |
char c,d; | |
input[0] = fopen(argv[1],"r"); | |
input[1] = fopen(argv[2],"r"); | |
j = 1; | |
ixold[0] = ixnew[0] = 0; | |
jackpot = 0; | |
ctold = ctnew = 0; | |
for(i=1;i<=len[0];i++) { | |
if(J[i]==0) { | |
ixold[i] = ctold += skipline(0); | |
continue; | |
} | |
while(j<J[i]) { | |
ixnew[j] = ctnew += skipline(1); | |
j++; | |
} | |
for(;;) { | |
c = getc(input[0]); | |
d = getc(input[1]); | |
ctold++; | |
ctnew++; | |
if(bflag && isspace(c) && isspace(d)) { | |
do { | |
if(c=='\n') break; | |
ctold++; | |
} while(isspace(c=getc(input[0]))); | |
do { | |
if(d=='\n') break; | |
ctnew++; | |
} while(isspace(d=getc(input[1]))); | |
} | |
if(c!=d) { | |
jackpot++; | |
J[i] = 0; | |
if(c!='\n') | |
ctold += skipline(0); | |
if(d!='\n') | |
ctnew += skipline(1); | |
break; | |
} | |
if(c=='\n') | |
break; | |
} | |
ixold[i] = ctold; | |
ixnew[j] = ctnew; | |
j++; | |
} | |
for(;j<=len[1];j++) { | |
ixnew[j] = ctnew += skipline(1); | |
} | |
fclose(input[0]); | |
fclose(input[1]); | |
/* | |
if(jackpot) | |
mesg("jackpot",empty); | |
*/ | |
} | |
void range(int a, int b, char *separator) | |
{ | |
printf("%d", a>b?b:a); | |
if(a<b) { | |
printf("%s%d", separator, b); | |
} | |
} | |
void fetch(long *f, int a, int b, FILE *lb, char *s) | |
{ | |
int i, j; | |
int nc; | |
for(i=a;i<=b;i++) { | |
fseek(lb,f[i-1],0); | |
nc = f[i]-f[i-1]; | |
prints(s); | |
for(j=0;j<nc;j++) | |
putchar(getc(lb)); | |
} | |
} | |
void change(int a, int b, int c, int d) | |
{ | |
if(a>b&&c>d) return; | |
anychange = 1; | |
if(opt!=1) { | |
range(a,b,","); | |
putchar(a>b?'a':c>d?'d':'c'); | |
if(opt!=-1) range(c,d,","); | |
} else { | |
putchar(a>b?'a':c>d?'d':'c'); | |
range(a,b," "); | |
} | |
putchar('\n'); | |
if(opt==0) { | |
fetch(ixold,a,b,input[0],"< "); | |
if(a<=b&&c<=d) prints("---\n"); | |
} | |
fetch(ixnew,c,d,input[1],opt==0?"> ":empty); | |
if(opt!=0&&c<=d) prints(".\n"); | |
} | |
void output(char **argv) | |
{ | |
int m; | |
int i0, i1, j1; | |
int j0; | |
input[0] = fopen(argv[1],"r"); | |
input[1] = fopen(argv[2],"r"); | |
m = len[0]; | |
J[0] = 0; | |
J[m+1] = len[1]+1; | |
if(opt!=-1) for(i0=1;i0<=m;i0=i1+1) { | |
while(i0<=m&&J[i0]==J[i0-1]+1) i0++; | |
j0 = J[i0-1]+1; | |
i1 = i0-1; | |
while(i1<m&&J[i1+1]==0) i1++; | |
j1 = J[i1+1]-1; | |
J[i1] = j1; | |
change(i0,i1,j0,j1); | |
} else for(i0=m;i0>=1;i0=i1-1) { | |
while(i0>=1&&J[i0]==J[i0+1]-1&&J[i0]!=0) i0--; | |
j0 = J[i0+1]-1; | |
i1 = i0+1; | |
while(i1>1&&J[i1-1]==0) i1--; | |
j1 = J[i1-1]+1; | |
J[i1] = j1; | |
change(i1,i0,j1,j0); | |
} | |
if(m==0) | |
change(1,0,1,len[1]); | |
} | |
void main(int argc, char **argv) | |
{ | |
int k; | |
char **args; | |
args = argv; | |
if(argc>3 && *argv[1]=='-') { | |
argc--; | |
argv++; | |
for(k=1;argv[0][k];k++) { | |
switch(argv[0][k]) { | |
case 'e': | |
opt = -1; | |
break; | |
case 'f': | |
opt = 1; | |
break; | |
case 'b': | |
bflag = 1; | |
break; | |
case 'h': | |
execv("/usr/lib/diffh",args); | |
mesg("cannot find diffh",empty); | |
done(); | |
} | |
} | |
} | |
if(argc!=3) { | |
mesg("arg count",empty); | |
done(); | |
} | |
dummy = malloc(1); | |
filename(&argv[1], &argv[2]); | |
filename(&argv[2], &argv[1]); | |
prepare(0, argv[1]); | |
prepare(1, argv[2]); | |
prune(); | |
sort(sfile[0],slen[0]); | |
sort(sfile[1],slen[1]); | |
member = (int *)file[1]; | |
equiv(sfile[0], slen[0], sfile[1], slen[1], member); | |
member = (int *)ralloc((char *)member,(slen[1]+2)*sizeof(int)); | |
class = (int *)file[0]; | |
unsort(sfile[0], slen[0], class); | |
class = (int *)ralloc((char *)class,(slen[0]+2)*sizeof(int)); | |
klist = (int *)talloc((slen[0]+2)*sizeof(int)); | |
clist = (struct cand *)talloc(sizeof(cand)); | |
k = stone(class, slen[0], member, klist); | |
free((char *)member); | |
free((char *)class); | |
J = (int *)talloc((len[0]+2)*sizeof(int)); | |
unravel(klist[k]); | |
free((char *)clist); | |
free((char *)klist); | |
ixold = (long *)talloc((len[0]+2)*sizeof(long)); | |
ixnew = (long *)talloc((len[1]+2)*sizeof(long)); | |
check(argv); | |
output(argv); | |
status = anychange; | |
done(); | |
} |
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