Skip to content

Instantly share code, notes, and snippets.

@tjelvar-olsson
Created February 22, 2017 09:57
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save tjelvar-olsson/0efedb04b580e77cd966430fe50e499c to your computer and use it in GitHub Desktop.
Save tjelvar-olsson/0efedb04b580e77cd966430fe50e499c to your computer and use it in GitHub Desktop.
bfconvert -range bug report
Hyopcotyl3.czi:
wget -O Hyopcotyl3.czi https://ndownloader.figshare.com/files/5398223
bftools:
wget http://downloads.openmicroscopy.org/bio-formats/5.3.4/artifacts/bftools.zip
unzip bftools
what_happened_to_channels_0_and_2.ome.tif:
./bftools/bfconvert -range 10 10 Hyopcotyl3.czi what_happened_to_channels_1_and_2.ome.tif
this_never_gets_created.ome.tif:
./bftools/bfconvert -channel 0 -range 10 10 Hyopcotyl3.czi this_never_gets_created.ome.tif
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment