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Last active August 29, 2015 14:15
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Presentation Layer for Sumatra Database
Raw
data.json
[{
"script_arguments": "<parameters>",
"platforms": [
{
"system_name": "Linux",
"machine": "x86_64",
"version": "#34-Ubuntu SMP Wed May 29 20:22:58 UTC 2013",
"ip_addr": "127.0.0.1",
"architecture_bits": "64bit",
"architecture_linkage": "ELF",
"release": "3.8.0-23-generic",
"network_name": "loki",
"processor": "x86_64"
}
],
"duration": 0.5261759757995605,
"diff": "",
"datastore": {
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"parameters": {
"root": "./Data/0665b0f9f020"
}
},
"input_datastore": {
"type": "FileSystemDataStore",
"parameters": {
"root": "/"
}
},
"executable": {
"path": "/home/wd15/.virtualenvs/default/bin/python",
"version": "2.7.4",
"name": "Python",
"options": ""
},
"parameters": {
"content": "wait = 0.5",
"type": "SimpleParameterSet"
},
"label": "0665b0f9f020",
"version": "df7011f201272609f5da12958ad62f7bf126fc7b",
"stdout_stderr": "waiting for 0.5(s)\nfinished\n",
"repository": {
"url": "/home/wd15/git/tmp_sumatra/jontest",
"type": "GitRepository",
"upstream": null
},
"tags": [],
"timestamp": "2013-06-06 16:45:47",
"reason": "",
"dependencies": [],
"user": "Daniel Wheeler <daniel.wheeler2@gmail.com>",
"repeats": null,
"output_data": [],
"input_data": [],
"launch_mode": {
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"parameters": {
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"options": null
}
},
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"outcome": ""
},
{
"script_arguments": "<parameters>",
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"ip_addr": "127.0.0.1",
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],
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"datastore": {
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"parameters": {
"root": "./Data/69b9f844a496"
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},
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"type": "FileSystemDataStore",
"parameters": {
"root": "/"
}
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"path": "/home/wd15/.virtualenvs/default/bin/python",
"version": "2.7.4",
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},
"label": "69b9f844a496",
"version": "df7011f201272609f5da12958ad62f7bf126fc7b",
"stdout_stderr": "waiting for 0.4(s)\nfinished\n",
"repository": {
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"type": "GitRepository",
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"tags": [],
"timestamp": "2013-06-06 16:45:43",
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}
},
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},
{
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},
{
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"ip_addr": "127.0.0.1",
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},
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}
},
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"outcome": ""
},
{
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"version": "#34-Ubuntu SMP Wed May 29 20:22:58 UTC 2013",
"ip_addr": "127.0.0.1",
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],
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"datastore": {
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}
},
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}
},
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"path": "/home/wd15/.virtualenvs/default/bin/python",
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"name": "Python",
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},
"parameters": {
"content": "wait = 0.1",
"type": "SimpleParameterSet"
},
"label": "bb4bb1a9aa86",
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"stdout_stderr": "waiting for 0.1(s)\nfinished\n",
"repository": {
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"type": "GitRepository",
"upstream": null
},
"tags": [],
"timestamp": "2013-06-06 16:45:24",
"reason": "",
"dependencies": [],
"user": "Daniel Wheeler <daniel.wheeler2@gmail.com>",
"repeats": null,
"output_data": [],
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"working_directory": "/home/wd15/git/tmp_sumatra/jontest",
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}
},
"main_file": "script.py",
"outcome": ""
}]
Raw
index.html
<style>
.record{
display: block;
/**align-content: space-between;**/
width: 100%;
}
.value{
order:1;
}
.plot svg{
}
.plot svg circle{
opacity: .8;
}
.active{
border-style: solid;
border-width: 5px;
display: block;
}
.hide{
display: none;
}
circle{
border-style: solid;
border-width: 2px;
fill: gray;
}
</style>
<script src="//cdn.jsdelivr.net/g/d3js,lodash,riot@2.0(riot.min.js+compiler.min.js)"></script>
<script>
;( function(){
d3.json('small.json', function(d){
// remove null entries
d = d.filter( function(d){ return (d && d['output_data'][0]); } );
// Initialize all keys
var keys = ['timestamp','user'];
var keys = d3.keys(d[0]).filter( function(k){
return typeof d[0][k] != 'object';
});
data = d;
// Create Rows of Records that contain Values
d3.select('.records')
.selectAll('.record')
.data( d3.range(d.length) )
.call( function(s){
s.enter()
.append( 'div' )
})
.classed({
record: true,
hide: true
});//classed; //call
// Create Values in
d3.selectAll('.record')
.each( function(i){
// index passed from selection
d3.select(this)
.selectAll('.value')
.data( keys )
.call( function(s){
s.enter()
.append('div')
.classed({
value: true
})
;//classed
});//call
});//each
// add some text
d3.selectAll('.value')
.each( function(k){
// return key from loaded data
var p = d3.select(this)
.node()
.parentNode,
i = d3.select(p)
.data();
console.log(d[i],k);
d3.select(this)
.text( k + ' :: ' + d[i][k])
});
// Style the record for dissemination
d3.selectAll('.record')
.each( function(i){
console.log(i);
if(i%2){
d3.select(this)
.style( 'background-color', 'lightblue')
}
});
/** Use existing data in DOM **/
// svg size
// name as variables for reuse
var w = 400,
h = 400;
// x scale and axis
var x = d3.scale.linear()
.range( [w,0] )
.domain( [ -1, d.length ]),
xa = d3.svg.axis()
.scale(x);
// y scale and axis
var y = d3.scale.linear()
.range( [0,h] )
.domain( [0, d3.max(d, function(d){
return d['duration'];
})
]),
ya = d3.svg.axis()
.scale(y)
.orient('right');
// circle radius
var r = d3.scale.linear()
.range( [10, 20])
.domain( d3.extent( d, function(d){return d['output_data'][0]['metadata']['size']}))
// apend svg
d3.select('.plot')
.append('svg').attr('width', w).attr('height', h)
// add axis
.call( function(s){
s.append('g')
.classed({
axes : true
})
.call(xa)
s.append('g')
.classed({
axes : true
})
.call(ya)
})
.selectAll( 'circle.record')
.data( d3.range( d.length ) )
// Make Circles if they don't exist
.call( function(s){
s.enter()
.append( 'circle')
.classed( {
record: true
})
})
//circle attributes
.call( function(s){
s.attr('cy',function(i){ return y(d[i]['duration'])})
.attr('cx',function(i){ return x(i);})
.attr('r',function(i){ return r(d[i]['output_data'][0]['metadata']['size'])})
})
//click behavior
.on('mouseover', function(i){
d3.select( d3.select('.records')
.selectAll('.record')[0][i]
).classed({
hide: false
});
})
.on('mouseout', function(i){
d3.select( d3.select('.records')
.selectAll('.record')[0][i]
).classed({
hide: true
})
})
});//json
})(); //iife
</script>
<div class="plot">
</div>
<div class="records">
<div class="record">
<div class="value">
</div>
</div>
</div>
<!--
Format
Parse
Scale
-->
Raw
small.json
[{"script_arguments": "", "platforms": [{"system_name": "Linux", "ip_addr": "127.0.0.1", "architecture_bits": "64bit", "machine": "x86_64", "architecture_linkage": "ELF", "version": "#1 SMP Mon Feb 25 00:26:11 UTC 2013", "release": "2.6.32-5-amd64", "network_name": "r039", "processor": ""}], "duration": 18019.035968065262, "diff": "", "datastore": {"type": "FileSystemDataStore", "parameters": {"root": "./Data/4e6d840d9723"}}, "input_datastore": {"type": "FileSystemDataStore", "parameters": {"root": "/"}}, "executable": {"path": "/users/wd15/.virtualenvs/fipy/bin/python", "version": "2.6.6", "name": "Python", "options": ""}, "parameters": {"content": "totalTime = 7000.0\ntotalSteps = 100000000000\nCFL = 0.1\nappliedPotential = -0.25\nareaRatio = 0.093\nsolver_tol = 1e-06\nsweeps = 4\nkPlus = 1000.0\nNx = 300\nfeatureDepth = 5.6e-05\ndeltaRef = 0.03\ntol = 1e-10\ndtMax = 1.0\nbulkSuppressor = 0.02\nkMinus = 1000000000.0", "type": "SimpleParameterSet"}, "label": "4e6d840d9723", "version": "b467f01d4abdfb394232a7ed204546e376ad1b41", "stdout_stderr": "[ 1. 1. 1. 1.]\n[ 0.33621124 0.62545709 0.01877522 0.16968397]\n[ 0.11832395 0.20883864 0.0038", "repository": {"url": "/users/wd15/git/extremefill-data", "type": "GitRepository", "upstream": "git@github.com:wd15/extremefill-data.git"}, "tags": ["inline", "1680564", "serialnumber24", "qsub"], "timestamp": "2013-06-08 01:54:35", "reason": "Rerun featureDepth simulations as parameter was not passed.", "dependencies": [{"name": "Cython", "module": "python", "source": "attribute", "version": "0.17.2", "diff": "", "path": "/users/wd15/.virtualenvs/fipy/lib/python2.6/site-packages/Cython"}, {"name": "distutils", "module": "python", "source": "attribute", "version": "2.6.6", "diff": "", "path": "/users/wd15/.virtualenvs/fipy/lib/python2.6/distutils"}, {"name": "encodings", "module": "python", "source": null, "version": "unknown", "diff": "", "path": "/users/wd15/.virtualenvs/fipy/lib/python2.6/encodings"}, {"name": "numexpr", 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"path": "/users/wd15/.virtualenvs/fipy/lib/python2.6/site-packages/tables"}], "user": "Daniel Wheeler <daniel.wheeler2@gmail.com>", "output_data": [{"path": "data.h5", "digest": "75e55519de79d289f85f0cb3f946f14226acfc83", "metadata": {"mimetype": null, "size": 342677776, "encoding": null}}], "input_data": [], "launch_mode": {"type": "SerialLaunchMode", "parameters": {"working_directory": "/users/wd15/git/extremefill-data"}}, "main_file": "script.py", "outcome": ""}, {"script_arguments": "", "platforms": [{"system_name": "Linux", "ip_addr": "127.0.0.1", "architecture_bits": "64bit", "machine": "x86_64", "architecture_linkage": "ELF", "version": "#1 SMP Mon Feb 25 00:26:11 UTC 2013", "release": "2.6.32-5-amd64", "network_name": "r033", "processor": ""}], "duration": 18035.748934030533, "diff": "", "datastore": {"type": "FileSystemDataStore", "parameters": {"root": "./Data/743a73f1dcbd"}}, "input_datastore": {"type": "FileSystemDataStore", "parameters": {"root": "/"}}, "executable": {"path": "/users/wd15/.virtualenvs/fipy/bin/python", "version": "2.6.6", "name": "Python", "options": ""}, "parameters": {"content": "totalTime = 7000.0\ntotalSteps = 100000000000\nCFL = 0.1\nappliedPotential = -0.25\nareaRatio = 0.093\nsolver_tol = 1e-06\nsweeps = 4\nkPlus = 1000.0\nNx = 300\nfeatureDepth = 5.6e-05\ndeltaRef = 0.03\ntol = 1e-10\ndtMax = 1.0\nbulkSuppressor = 0.02\nkMinus = 695192796.178", "type": "SimpleParameterSet"}, "label": "743a73f1dcbd", "version": "b467f01d4abdfb394232a7ed204546e376ad1b41", "stdout_stderr": "[ 1. 1. 1. 1.]\n[ 0.33484945 0.62681078 0.02006877 0.1378342 ]\n[ 0.11806738 0.20773137 0.0031", "repository": {"url": "/users/wd15/git/extremefill-data", "type": "GitRepository", "upstream": "git@github.com:wd15/extremefill-data.git"}, "tags": ["inline", "serialnumber24", "1680563", "qsub"], "timestamp": "2013-06-08 01:53:35", "reason": "Rerun featureDepth simulations as parameter was not passed.", "dependencies": [{"name": "Cython", "module": "python", 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