1-augur-api-usage-symbol-freq.json

[
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{"symbol": "augur.utils.write_json", "count": 9, "percent": 6.474820143884892, "histogram": "***********"}
]

2-augur-api

augur.io.read_metadata
augur.utils.read_tree
augur.utils.read_node_data
augur.distance.read_distance_map
augur.translate.safe_translate
augur.align.run
augur.clades.read_in_clade_definitions
augur.clades.is_node_in_clade
augur.utils.load_features
augur.frequency_estimators.float_to_datestring
augur.utils.json_to_tree
augur.__version__.__version__
augur.utils.read_metadata
augur.utils.get_numerical_dates
augur.utils.read_node_data
augur.utils.read_metadata
augur.utils.get_numerical_dates
augur.utils.numeric_date
augur.align.read_sequences
augur.io.open_file
augur.io.open_file
augur.utils.read_metadata
augur.translate.safe_translate
augur.align.run
augur.clades.read_in_clade_definitions
augur.clades.is_node_in_clade
augur.utils.load_features

augur.utils.read_metadata
augur.utils.read_node_data
augur.export_v2.parse_node_data_and_metadata

augur.utils.write_json

augur.io.read_sequences

augur.io.read_metadata
augur.utils.read_lat_longs

augur.utils.load_features
augur.translate.safe_translate

augur.translate.safe_translate
augur.clades.read_in_clade_definitions
augur.clades.is_node_in_clade
augur.utils.load_features

augur.io.read_sequences

augur.utils.write_json

augur.io.open_file
augur.io.read_sequences
augur.io.write_sequences

augur.utils.read_metadata
augur.frequences.TreeKdeFrequencies

augur.io.open_file
augur.io.read_sequences
augur.io.write_sequences

augur.parse.forbidden_characters

augur.io.read_metadata
augur.dates.get_numerical_dates

augur.utils.load_features

augur.__version__.__version__

augur.utils.read_metadata
augur.utils.get_numerical_dates
augur.utils.load_features
augur.align.run

augur.utils.read_node_data

augur.frequency_estimators.logit_transform
augur.frequency_estimators.TreeKdeFrequencies
augur.lbi.select_nodes_in_season
augur.utils.write_json

augur.utils.write_json

augur.utils.write_json

augur.utils.json_to_tree

augur.utils.read_metadata

augur.align.read_sequences

augur.frequency_estimators.TreeKdeFrequencies
augur.utils.write_json

augur.utils.json_to_tree

augur.io.read_metadata

augur.utils.numeric_date

augur.translate.safe_translate
augur.align.run
augur.clades.read_in_clade_definitions
augur.clades.is_node_in_clade
augur.utils.load_features

augur.translate.translate_feature
augur.utils.load_feature

augur.utils.read_node_data
augur.titer_model.TiterCollection
augur.utils.read_tree
augur.utils.write_json

augur.io.read_sequences

augur.io.open_file

augur.utils.write_json
augur.ancestral.collect_mutations_and_sequences

augur.io.read_metadata

augur.io.open_file
augur.io.read_sequences
augur.io.write_sequences


augur.io.read_metadata
augur.utils.write_json

augur.utils.read_node_data

augur.utils.read_metadata
augur.utils.get_numerical_dates

augur.io.open_file