tsikup

#!/bin/bash
set -e

usage="$(basename "$0") [-h] [-i PROJECT] [-v VM] [-p PYTHON] [-d NOTEBOOKS]
Make a user provide SSH key and jupyter notebooks (in roles/bootstrap/files/notebooks) to each user listed in var/common.yml
where:
    -h  show this help text
    -i  google cloud project id
    -v  name of instance/virtual machine
    -p  python path

tsikup

Collections of scripts harvested mainly from Pete, but also picked up from the forums

TOC

Accessing dynamic measurements.groovy - Most annotation measurements are dynamically created when you click on the annotation, and 
are not accessible through the standard getMeasurement function. This is a way around that.

Affine transformation.groovy - access more accurate measurements for the affine transformation used in the image alignment (m5/m6+)

Alignment of local cells.groovy - check neighborhood for similarly aligned cells