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tst32/test.aln

Created January 19, 2017 15:16
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test.aln
CLUSTAL 2.1 multiple sequence alignment
sequence1 ----GTGTCTACTCAATCCAATCGTAATGCGCTCGTAGTGGCGCAACTGAAAGGAGACTT
sequence2 ATGAGCGAC-ACCCAAGCAAACCGTAATGCGCTAATCATCGCGCAGCTTAAGGGCGACTT
sequence3 ----GTGTCTACTCAATCCAATCGTAATGCGCTCGTAGTGGCGCAACTGAAAGGAGACTT
* * * ** *** * ** *********** * * ***** ** ** ** *****
sequence1 CGTGGCGTTCCTGTTCGTCTTATGGAAGGCGTTAAATCTTCCGGTGCCAACTAAGTGCCA
sequence2 TGTGGCCTTCCTGTTCGTATTGTGGAAGGCTTTGGCTCTCCCGCCACCGACTAAGTGTCA
sequence3 CGTGGCGTTCCTATTCGTCTTATGGAAGGCGCTAAACCTACCGGTGCCCACTAAGTGTCA
***** ***** ***** ** ******** * ** *** ** ******** **
sequence1 AATAGATATGGCTAAGGTGCTGGCGAATGGAGACAACAAGAAGTTCATCCTACAGGCTTT
sequence2 GATTGATATGGCCCGGTGTCTGGCTAACGGAGACAACAAGAAGTTTATCCTACAGGCTTT
sequence3 GATTGACATGGCTAAGGTGCTGGCGAATGGAGACAACAAGAAGTTCATCTTACAGGCTTT
** ** ***** * ***** ** ***************** *** **********
sequence1 CCGTGGTATCGGTAAGTCGTTCATCACATGTGCGTTCGTTGTGTGGACGTTATGGCGTGA
sequence2 CCGTGGTATCGGTAAGTCATTCATCACCTGTGCGTTCGTTGTGTGGACGTTATGGCGTGA
sequence3 CCGTGGTATCGGTAAGTCGTTCATCACATGTGCGTTCGTTGTGTGGTCCTTATGGAGAGA
****************** ******** ****************** * ****** * **
sequence1 CCCTCAGTTGAAGATACTGATTGTCTCTGCATCCAAAGAACGTGCGGACGCTAACTCCAT
sequence2 CCCTCAGTTGAAGATACTGATTGTCTCTGCATCCAAAGAACGTGCGGACGCTAACTCCAT
sequence3 CCCTCAGTTGAAGATACTTATCGTATCAGCCTCTAAGGAGCGTGCAGACGCTAACTCCAT
****************** ** ** ** ** ** ** ** ***** **************
sequence1 CTTCATCAAGAACATCATTGACCTGCTGCCCTTCTTGGCTGAGCTAAAGCCACGCCCCGG
sequence2 CTTCATCAAGAACATCATTGACCTGCTGCCCTTCTTGGCTGAGCTAAAGCCTCGCCCCGG
sequence3 CTTTATTAAGAACATCATTGACCTGCTGCCATTCCTATCTGAGTTAAAGCCAAGACCCGG
*** ** *********************** *** * ***** ******* * *****
sequence1 TCAGCGTGACTCTGTGATTAGTTTCGATGTTGGCCCTGCCAAGCCTGACCACTCTCCGTC
sequence2 TCAGCGTGACTCTGTGATTAGTTTCGATGTTGGCCCTGCCAAGCCTGACCACTCTCCGTC
sequence3 ACAGCGTGACTCGGTAATCAGCTTTGATGTAGGCCCAGCCAATCCTGACCACTCTCCTAG
*********** ** ** ** ** ***** ***** ***** **************
sequence1 TGTGAAGTCGGTGGGTATCACTGGTCAGTTGACTGGTAGCCGTGCTGATATCATCATAGC
sequence2 TGTGAAGTCGGTTGGTATCACTGGTCAGTTGACTGGTAGCCGTGCTGATATCATCATAGC
sequence3 TGTGAAATCAGTAGGTATCACTGGTCAGTTAACTGGTAGCCGTGCTGACATTATCATTGC
****** ** ** ***************** ***************** ** ***** **
sequence1 GGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGCCCGTGAGAAGCTGTGGAC
sequence2 GGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGCCCGTGAGAAGCTGTGGAC
sequence3 GGATGACGTTGAGATTCCGTCTAACAGCGCAACTATGGGTGCCCGTGAGAAGCTATGGAC
************************* ******* ***************** *****
sequence1 TCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCGCTGCCGACCTCTCGCGTTATCTACCT
sequence2 TCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCGCTGCCAACTTCTCGCGTTATCTACCT
sequence3 TCTGGTTCAGGAGTTCGCTGCGTTACTTAAACCGCTGCCTTCCTCTCGCGTTATCTACCT
****** ***** ** ****** * ** *********** * *****************
sequence1 TGGTACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGAAGATAACCGTGGGTACAC
sequence2 TGGTACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGAAGATAACCGTGGGTACAC
sequence3 TGGTACACCTCAGACAGAGATGACTCTCTATAAGGAACTTGAGGATAACCGTGGGTACAC
****** ***** ** ** ***** * ** ******** ** *****************
sequence1 CACAATCATCTGGCCTGCGCTCTATCCGCGTAGCCGTGAGGAAGACTTGTACTATGGTGA
sequence2 CACAATCATCTGGCCTGCGCTCTATCCGCGTAGCCGTGAGGAAGACTTGTACTATGGCGA
sequence3 AACCATTATCTGGCCTGCTCTGTACCCAAGGACACGTGAAGAGAACCTCTATTACTCACA
** ** *********** ** ** ** * * ***** ** ** * ** ** *
sequence1 ACGTCTGGCCCCTATGCTCCGTGAGGAGTTCAACGATGGGTTCGAGATGCTCCAAGGCCA
sequence2 CCGTCTGGCCCCGATGCTCCGCGAAGAGTTCAACGATGGGTTCGAGATGCTCCAAGGTCA
sequence3 GCGTCTTGCTCCTATGTTACGCGCTGAGTACGATGAGAACCCTGAGGCACTTGCTGGGAC
***** ** ** *** * ** * **** * * ** *** ** **
sequence1 ACCAACTGACCCCGTGCGATTCGACATGGAAGACCTACGGGAACGTGAGTTGGAATACGG
sequence2 ACCGACTGACCCCGTGCGCTTCGATATGGAAGACCTGCGTGAGCGTGAGTTGGAATACGG
sequence3 TCCAACAGACCCAGTGCGCTTTGACCGTGATGACCTGCGCGAGCGTGAGTTGGAATACGG
** ** ***** ***** ** ** ** ***** ** ** *****************
sequence1 TAAGGCTGGCTTCACTTTACAGTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTA
sequence2 TAAGGCTGGCTTCACTTTGCAGTTCATGCTCAACCCGAACCTGAGTGATGCCGAGAAGTA
sequence3 TAAGGCTGGCTTTACGCTACAGTTCATGCTTAACCCTAACCTTAGTGATGCCGAGAAGTA
************ ** * *********** ***** ***** *****************
sequence1 CCCCTTACGCCTCCGTGACGCTATCGTGTGCGGTCTTGACTTCGAGAAAGCCCCAATGCA
sequence2 CCCCTTACGCCTCCGTGACGCTATCGTGTGCGGTCTGGACTTCGAGAAAGCCCCAATGCA
sequence3 CCCGCTGAGGCTTCGTGACGCTATCGTAGCGGCCTTAGACTTAGAGAAGGCCCCAATGCA
*** * * ** ************** * * ***** ***** ***********
sequence1 CTACCAGTGGCTTCCGAACCGTCAGAATCGCAATGAGGAGCTGCCTAACGTGGGCCTTAA
sequence2 TTACCAGTGGCTTCCGAACCGTCAGAATCGCAATGAAGAGCTTCCTAACGTGGGCCTTAA
sequence3 TTACCAGTGGCTTCCGAACCGTCAGAACATCATTGAGGACCTTCCTAACGTTGGCCTTAA
************************** ** *** ** ** ******** ********
sequence1 GGGTGATGACATTCATAGCTATCATTCGTGCAGCCAGAACACTGGACAGTACCAGCAACG
sequence2 GGGTGATGATATTCATAGCTATCATTCGTGCAGCCAGAACACTGGACAGTACCAGCAACG
sequence3 GGGTGATGACCTGCATACGTACCACGATTGTTCCAACAACTCAGGTCAGTACCAACAGAA
********* * **** ** ** ** * * *** * ** ******** **
sequence1 CATCCTCGTGATTGACCCTAGTGGTCGAGGTAAGGATGAGACAGGTTACGCAGTGTTGTT
sequence2 CATCCTCGTGATTGACCCTAGTGGTCGAGGTAAGGATGAGACTGGTTACGCAGTGTTGTT
sequence3 GATTCTGGTCATTGACCCTAGTGGTCGCGGTAAGGACGAAACAGGTTACGCTGTGCTGTA
** ** ** ***************** ******** ** ** ******** *** ***
sequence1 CACCCTGAATGGCTACATCTATCTGATGGAAGCTGGCGGGTTCCGCGATGGTTATTCCGA
sequence2 CACCCTGAATGGCTACATCTATCTGATGGAAGCTGGCGGGTTCCGTGATGGTTACTCCGA
sequence3 CACACTGAACGGTTACATCTACCTTATGGAAGCTGGAGGTTTCCGTGATGGCTACTCCGA
*** ***** ** ******** ** *********** ** ***** ***** ** *****
sequence1 TAAGACCCTTGAGTCCCTCGCTAAGAAAGCGAAGCAGTGGAAGGTTCAGACAGTGGTCTT
sequence2 CAAGACCCTTGAGTCCCTCGCTAAGAAAGCGAAGCAGTGGAAGGTTCAGACAGTGGTCTT
sequence3 TAAGACCCTTGAGTTACTCGCTAAGAAGGCAAAGCAATGGGGAGTCCAGACGGTTGTCTA
************* *********** ** ***** *** ** ***** ** ****
sequence1 CGAGAGTAACTTCGGGGATGGTATGTTTGGTAAGGTATTCAGCCCTGTGCTCCTTAAACA
sequence2 CGAGAGTAACTTCGGGGATGGTATGTTTGGTAAGGTATTCAGCCCTGTGCTCCTGAAACA
sequence3 CGAGAGTAACTTCGGTGACGGTATGTTCGGTAAGGTATTCAGTCCTATCCTTCTTAAACA
*************** ** ******** ************** *** * ** ** *****
sequence1 CCATGCAGCAGCTCTGGAAGAGATTCGTGCTCGTGGTATGAAGGAACTACGCATTTGTGA
sequence2 CCATGCAGCCGCTATGGAAGAGATTCGTGCTCGTGGTATGAAGGAACTACGCATTTGCGA
sequence3 CCACAACTGTGCGATGGAAGAGATTCGTGCCCGTGGTATGAAAGAGATGCGTATTTGCGA
*** ** **************** *********** ** * ** ***** **
sequence1 TACGCTGGAGCCTGTACTCTCTACGCACCGCCTTGTGATTCGTGATGAGGTGATTCGTGA
sequence2 TACGCTGGAACCTGTGCTCTCTACGCACCGCCTTGTGATTCGTGATGAGGTGATTCGTGA
sequence3 TACCCTTGAGCCAGTCATGCAGACTCACCGCCTTGTAATTCGTGATGAGGTCATTAGGGC
*** ** ** ** ** * ** *********** ************** *** * *
sequence1 GGACTACCAGACTGCCCGTGACGCTGATGGCAAGCATGACGTTCGCTATTCGCTGTTCTA
sequence2 GGACTACCAGACTGCCCGTGACGCTGATGGCAAGCATGACGTTCGCTATTCGCTGTTCTA
sequence3 CGACTACCAGTCCGCTCGTGACGTAGACGGTAAGCATGACGTTAAGTACTCGTTGTTCTA
********* * ** ******* ** ** ************ ** *** *******
sequence1 CCAGTTGACCCGTATGGCTCGTGAGAAGGGCGCTGTGGCCCATGATGACCGACTTGATGC
sequence2 CCAGTTGACCCGTATGGCTCGTGAGAAGGGCGCTGTGGCCCATGATGACCGACTCGATGC
sequence3 CCAGATGACCCGTATCACTCGTGAGAAAGGCGCTCTGGCTCATGATGACCGATTGGATGC
**** ********** ********** ****** **** ************ * *****
sequence1 GTTAGCGTTAGGTGTGGAGTTCTTGCGCTCTACGATGGAACTGGACGCCGTGAAGGTGGA
sequence2 GTTAGCATTGGGTGTGGAGTTCTTACGCTCTACGATGGAACTGGACGCCGTGAAGGTGGA
sequence3 CCTTGCGTTAGGCATTGAGTATCTCCGTGAGTCCATGCAGTTGGATTCCGTTAAGGTCGA
* ** ** ** * **** * ** * *** * **** **** ***** **
sequence1 AGCCGAGGTGCTTGAGGCATTCTTAGAGGAACACATGGAGCACCCAATACATTCGGCTGG
sequence2 GGCTGAGGTGCTTGAGGCGTTCTTAGAGGAACACATGGAGCACCCAATCCATTCGGCTGG
sequence3 GGGTGAAGTACTTGCTGACTTCCTTGAGGAACACATGATGCGTCCTACGGTTGCTGCTAC
* ** ** **** * *** * ************ ** ** * * * ***
sequence1 TCACGTAGTTACCGCTATGGTTGACGGGATGGAACTCTATTGGGAGGATGACGATGTGAA
sequence2 TCACGTAGTTACCTCTATGGTTGACGGTATGGAACTCTATTGGGAGGATGACGATGTGAA
sequence3 GCATATCATTGAGATGTCTGTGGGAGGAGTTGATGTGTACTCTGAGGACGATGAGGGTTA
** * ** ** * ** * ** * ** * ***** ** ** * *
sequence1 TGGCGATAGGTTCATTAACTGGTAG
sequence2 TAGCAATAGGTTCATTGACTGGTAG
sequence3 CGGTACGTCTTTCATTGAGTGGTGA
* ****** * ****
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