Create aws genomics stacks

create-cromwell-stack.sh

aws --profile sandbox-admin cloudformation create-stack \
  --stack-name tthyer-cromwell-test \
  --template-body file://src/templates/cromwell/cromwell-resources.template.yaml \
  --capabilities CAPABILITY_IAM \
  --parameters \
    ParameterKey=Namespace,ParameterValue=tthyer-cromwell-test \
    ParameterKey=GWFCoreNamespace,ParameterValue=tthyer-cromwell-test-gwfcore \
    ParameterKey=VpcId,ParameterValue=vpc-0e9b80dc470a797d5 \
    ParameterKey=ServerSubnetID,ParameterValue=subnet-025c297e427e44daf \
    ParameterKey=DBSubnetIDs,ParameterValue=\"subnet-025c297e427e44daf,subnet-0b8a92e98f330a943\" \
    ParameterKey=DBPassword,ParameterValue=*** \
    ParameterKey=CromwellJarUrl,ParameterValue=https://tthyer-sandbox.s3.amazonaws.com/cromwell-56-f1e7bf5-SNAP.jar

create-gwfcore-stack.sh

aws --profile sandbox-admin cloudformation create-stack \
  --stack-name tthyer-cromwell-test-gwfcore \
  --template-body file://src/templates/gwfcore/gwfcore-root.template.yaml \
  --tags Key=OwnerEmail,Value=tess.thyer@sagebase.org Key=Department,Value=SysBio Key=Project,Value=amp-ad \
  --capabilities CAPABILITY_IAM \
  --stack-policy-during-update-url https://tthyer-sandbox.s3.amazonaws.com/gwfcore-stack-update-policy.json \
  --parameters \
    ParameterKey=VpcId,ParameterValue=vpc-0e9b80dc470a797d5 \
    ParameterKey=SubnetIds,ParameterValue=\"subnet-025c297e427e44daf,subnet-0b8a92e98f330a943\" \
    ParameterKey=TemplateRootUrl,ParameterValue=https://s3.amazonaws.com/tthyer-sandbox/aws-genomics-workflows/templates \
    ParameterKey=S3BucketName,ParameterValue=tthyer-cromwell-test-3 \
    ParameterKey=ExistingBucket,ParameterValue=true \
    ParameterKey=ArtifactBucketName,ParameterValue=tthyer-sandbox \
    ParameterKey=ArtifactBucketPrefix,ParameterValue=aws-genomics-workflows/artifacts \
    ParameterKey=PriorityCEMaxvCpus,ParameterValue=200