C5HHJACXX.json

{
    "name": "C5HHJACXX",
    "email": "at120@nyu.edu",
    "flowcell path": "/export/data1/gencore/hiseq/150116_SN911_0244_BC5HHJACXX",
    "output path": "/export/data1/gencore/demux",
    "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"",
    "sample sheet": [
        "C5HHJACXX,2,bgm1,,CGATGT,,N,,,lane_2",
        "C5HHJACXX,2,bgm2,,TGACCA,,N,,,lane_2",
        "C5HHJACXX,2,bgm3,,ACAGTG,,N,,,lane_2",
        "C5HHJACXX,2,bgm4,,GCCAAT,,N,,,lane_2",
        "C5HHJACXX,2,bgm5,,CAGATC,,N,,,lane_2",
        "C5HHJACXX,3,SV69,,CGATGT,,N,,,lane_3",
        "C5HHJACXX,3,SV70,,TGACCA,,N,,,lane_3",
        "C5HHJACXX,3,SV71,,ACAGTG,,N,,,lane_3",
        "C5HHJACXX,3,SV72,,GCCAAT,,N,,,lane_3",
        "C5HHJACXX,4,SV73,,CAGATC,,N,,,lane_4",
        "C5HHJACXX,4,SV74,,CTTGTA,,N,,,lane_4",
        "C5HHJACXX,4,SV75,,CGATGT,,N,,,lane_4",
        "C5HHJACXX,7,foxflaz12hpf1,,AAGGGA,,N,,,lane_7",
        "C5HHJACXX,7,foxfnk412hpf1,,CCTTCA,,N,,,lane_7",
        "C5HHJACXX,7,foxfcamras12hpf1,,GGACCC,,N,,,lane_7",
        "C5HHJACXX,7,foxflaz12hpf2,,TTCAGC,,N,,,lane_7",
        "C5HHJACXX,7,foxfnk412hpf2,,AAGACG,,N,,,lane_7",
        "C5HHJACXX,7,foxfcamras12hpf2,,CCTCGG,,N,,,lane_7",
        "C5HHJACXX,8,NLP7_mCHX_pN_mD_1,,ATCACG,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_mCHX_pN_mD_2,,CGATGT,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_mCHX_pN_mD_3,,TTAGGC,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_mCHX_pN_pD_4,,TGACCA,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_mCHX_pN_pD_5,,ACAGTG,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_mCHX_pN_pD_6,,GCCAAT,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_mD_7,,CAGATC,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_mD_8,,ACTTGA,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_mD_9,,GATCAG,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_pD_10,,TAGCTT,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_pD_11,,GGCTAC,,N,,,lane_8",
        "C5HHJACXX,8,NLP7_pCHX_pN_pD_12,,CTTGTA,,N,,,lane_8",
        "C5HHJACXX,5,SE297,,CAGATC,,N,,,lane_5",
        "C5HHJACXX,5,SE298,,ACTTGA,,N,,,lane_5",
        "C5HHJACXX,5,SE299,,GATCAG,,N,,,lane_5",
        "C5HHJACXX,5,SE300,,TAGCTT,,N,,,lane_5",
        "C5HHJACXX,5,SE301,,GGCTAC,,N,,,lane_5",
        "C5HHJACXX,5,SE302,,CTTGTA,,N,,,lane_5",
        "C5HHJACXX,5,SE303,,TGACCA,,N,,,lane_5",
        "C5HHJACXX,5,SE304,,ACAGTG,,N,,,lane_5",
        "C5HHJACXX,5,SE305,,GCCAAT,,N,,,lane_5",
        "C5HHJACXX,5,SE306,,GTGAAA,,N,,,lane_5",
        "C5HHJACXX,5,SE307,,GTGGCC,,N,,,lane_5",
        "C5HHJACXX,5,SE308,,GTTTCG,,N,,,lane_5",
        "C5HHJACXX,5,SE309,,CGTACG,,N,,,lane_5",
        "C5HHJACXX,5,SE310,,GAGTGG,,N,,,lane_5",
        "C5HHJACXX,5,SE311,,GGTAGC,,N,,,lane_5",
        "C5HHJACXX,6,SE312,,CAGATC,,N,,,lane_6",
        "C5HHJACXX,6,SE313,,ACTTGA,,N,,,lane_6",
        "C5HHJACXX,6,SE314,,ATGTCA,,N,,,lane_6",
        "C5HHJACXX,6,SE315,,CCGTCC,,N,,,lane_6",
        "C5HHJACXX,6,SE316,,GTAGAG,,N,,,lane_6",
        "C5HHJACXX,6,SE317,,GTCCGC,,N,,,lane_6",
        "C5HHJACXX,6,SE318,,GTGAAA,,N,,,lane_6",
        "C5HHJACXX,6,SE319,,GTGGCC,,N,,,lane_6",
        "C5HHJACXX,6,SE320,,GATCAG,,N,,,lane_6",
        "C5HHJACXX,6,SE321,,TAGCTT,,N,,,lane_6",
        "C5HHJACXX,6,SE322,,GGCTAC,,N,,,lane_6",
        "C5HHJACXX,6,SE323,,CTTGTA,,N,,,lane_6",
        "C5HHJACXX,6,SE324,,GTGGCC,,N,,,lane_6",
        "C5HHJACXX,6,SE325,,CGTACG,,N,,,lane_6",
        "C5HHJACXX,6,SE326,,AGTTCC,,N,,,lane_6"
	]
}