Alan Twaddle twaddlac
twaddlac
/ HAMDJADXX.json
Created
October 22, 2014 20:16
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| { | |
| "name": "HAMDJADXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141021_SN911_0235_BHAMDJADXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "HAMDJADXX,1,SV6,,CGATGT,,N,,,lane1", | |
| "HAMDJADXX,1,SV8,,ACAGTG,,N,,,lane1", | |
| "HAMDJADXX,1,SV9,,GCCAAT,,N,,,lane1", |
twaddlac
/ C4YA8ACXX.json
Last active
November 2, 2015 16:04
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| { | |
| "name": "C4YA8ACXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141017_SN911_0234_AC4YA8ACXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "C4YA8ACXX,6,MK170,,ATCACG,,N,,,lane6", | |
| "C4YA8ACXX,6,MK171,,CGATGT,,N,,,lane6", | |
| "C4YA8ACXX,6,MK172,,TTAGGC,,N,,,lane6", |
twaddlac
/ C56P1ACXX.json
Last active
November 2, 2015 16:04
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| { | |
| "name": "C56P1ACXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141106_SN911_0237_BC56P1ACXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "C56P1ACXX,7,MK207,,TGACCA,,N,,,lane7", | |
| "C56P1ACXX,7,MK208,,GGCTAC,,N,,,lane7", | |
| "C56P1ACXX,7,MK209,,CTTGTA,,N,,,lane7", |
twaddlac
/ HAURNADXX.json
Created
December 5, 2014 17:48
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| { | |
| "name": "HAURNADXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141203_SN911_0239_AHAURNADXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "HAURNADXX,2,QG1420-1,,undetermined,,N,,,lane2", | |
| "HAURNADXX,2,QG896-1,,undetermined,,N,,,lane2", | |
| "HAURNADXX,2,CB4856-ASE-1,,undetermined,,N,,,lane2", |
twaddlac
/ HBGGUADXX.json
Created
December 10, 2014 17:17
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| { | |
| "name": "HBGGUADXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141205_SN911_0240_AHBGGUADXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*\"", | |
| "sample sheet": [ | |
| "HBGGUADXX,1,LMN,,Undetermined,,N,,,lane1", | |
| "HBGGUADXX,2,LMN,,Undetermined,,N,,,lane2" | |
| ] |
twaddlac
/ HAMMWADXX.json
Created
December 19, 2014 18:09
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| { | |
| "name": "HAMMWADXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/141218_SN911_0241_AHAMMWADXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n,Y*\"", | |
| "sample sheet": [ | |
| "HAMMWADXX,1,wt,,ATCACG,,N,,,lane1", | |
| "HAMMWADXX,1,rad27d,,CGATGT,,N,,,lane1", | |
| "HAMMWADXX,1,cdc9deg_rad27d,,TGACCA,,N,,,lane1", |
twaddlac
/ C5HHJACXX.json
Last active
August 29, 2015 14:13
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| { | |
| "name": "C5HHJACXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/150116_SN911_0244_BC5HHJACXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "C5HHJACXX,2,bgm1,,CGATGT,,N,,,lane_2", | |
| "C5HHJACXX,2,bgm2,,TGACCA,,N,,,lane_2", | |
| "C5HHJACXX,2,bgm3,,ACAGTG,,N,,,lane_2", |
twaddlac
/ HF7C2ADXX.json
Last active
August 29, 2015 14:13
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| { | |
| "name": "HF7C2ADXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/150112_SN911_0243_AHF7C2ADXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n,Y*\"", | |
| "sample sheet": [ | |
| "HF7C2ADXX,1,AH6851-6h,,ATGTCA,,N,,,lane_1", | |
| "HF7C2ADXX,1,AH8049-6h,,ACAGTG,,N,,,lane_1", | |
| "HF7C2ADXX,1,AH8057-6h,,GTCCGC,,N,,,lane_1", |
twaddlac
/ C5HLUACXX.json
Last active
August 29, 2015 14:14
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| { | |
| "name": "C5HLUACXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/150129_SN911_0245_AC5HLUACXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6n\"", | |
| "sample sheet": [ | |
| "C5HLUACXX,1,foxflaz12hpf1,,AAGGGA,,N,,,lane_1", | |
| "C5HLUACXX,1,foxfnk412hpf1,,CCTTCA,,N,,,lane_1", | |
| "C5HLUACXX,1,foxfcamras12hpf1,,GGACCC,,N,,,lane_1", |
twaddlac
/ H2K7VBCXX.json
Last active
August 29, 2015 14:15
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| { | |
| "name": "H2K7VBCXX", | |
| "email": "at120@nyu.edu", | |
| "flowcell path": "/export/data1/gencore/hiseq/150209_SN911_0246_BH2K7VBCXX", | |
| "output path": "/export/data1/gencore/demux", | |
| "configure bcl2fastq": "--use-bases-mask \"Y*,I6nn,Y*\"", | |
| "sample sheet": [ | |
| "H2K7VBCXX,1,MRP17,,AGTCAA,,N,,,lane_1", | |
| "H2K7VBCXX,1,MRP19,,ATCACG,,N,,,lane_1", | |
| "H2K7VBCXX,1,MRP20,,CGATGT,,N,,,lane_1", |
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