Skip to content

Instantly share code, notes, and snippets.

@valyo

valyo/Bioclipse log

Created October 25, 2011 15:58
Show Gist options
  • Save valyo/1313253 to your computer and use it in GitHub Desktop.
Save valyo/1313253 to your computer and use it in GitHub Desktop.
Download ZIP
Bioclipse log XP 32 bit
Raw
Bioclipse log
!SESSION 2011-10-25 11:26:50.989 -----------------------------------------------
eclipse.buildId=2.5.0.201108060919
java.version=1.6.0_29
java.vendor=Sun Microsystems Inc.
BootLoader constants: OS=win32, ARCH=x86, WS=win32, NL=en_US
Framework arguments: -noupdate
Command-line arguments: -os win32 -ws win32 -arch x86 -data @nodefault -noupdate -consolelog
!ENTRY org.eclipse.core.resources 2 10035 2011-10-25 11:26:53.753
!MESSAGE The workspace exited with unsaved changes in the previous session; refreshing workspace to recover changes.
!ENTRY de.walware.rj.servi 4 0 2011-10-25 11:27:03.156
!MESSAGE An exception was thrown when trying to start the node (make a node).
!STACK 0
de.walware.rj.RjException: Error starting R node:
<COMMAND>
C:\Program Files\Java\jre6\bin\java
-classpath
/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.data_0.5.5.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.servi_0.5.3.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.client_0.5.1.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/org.eclipse.equinox.common_3.6.0.v20100503.jar;/c:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/org.eclipse.osgi_3.6.2.R36x_v20110210.jar
-Djava.security.policy=jar:file:/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar!/localhost.policy
-Djava.rmi.server.codebase=file:/C:/Documents%20and%20Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar
-Xss16384k
de.walware.rj.servi.internal.NodeController
rmi://127.0.0.1:64861/Rconsole-1319534822335
-verbose
</COMMAND>
<STDOUT>
</STDOUT>
<LOG file="out.log">
(RServi) R node log
Oct 25, 2011 11:27:02 AM de.walware.rj.server.srvImpl.AbstractServerControl initVerbose
CONFIG: verbose mode enabled.
Oct 25, 2011 11:27:02 AM de.walware.rj.server.srvImpl.AbstractServerControl initVerbose
CONFIG: java properties:
java.runtime.name=Java(TM) SE Runtime Environment
sun.boot.library.path=C:\Program Files\Java\jre6\bin
java.vm.version=20.4-b02
java.vm.vendor=Sun Microsystems Inc.
java.vendor.url=http://java.sun.com/
path.separator=;
java.vm.name=Java HotSpot(TM) Client VM
file.encoding.pkg=sun.io
sun.java.launcher=SUN_STANDARD
user.country=US
sun.os.patch.level=Service Pack 3
java.vm.specification.name=Java Virtual Machine Specification
user.dir=C:\DOCUME~1\valyo\LOCALS~1\Temp\Rconsole-1319534822335
java.runtime.version=1.6.0_29-b11
java.awt.graphicsenv=sun.awt.Win32GraphicsEnvironment
java.endorsed.dirs=C:\Program Files\Java\jre6\lib\endorsed
os.arch=x86
java.io.tmpdir=C:\DOCUME~1\valyo\LOCALS~1\Temp\
line.separator=
java.vm.specification.vendor=Sun Microsystems Inc.
user.variant=
os.name=Windows XP
sun.jnu.encoding=Cp1252
java.library.path=C:\Program Files\Java\jre6\bin;C:\WINDOWS\Sun\Java\bin;C:\WINDOWS\system32;C:\WINDOWS;C:\Program Files\R\R-2.13.1\bin\i386;C:/Program Files/Java/jre6/bin/client;C:/Program Files/Java/jre6/bin;C:/Program Files/Java/jre6/lib/i386;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\Documents and Settings\valyo\Desktop\Bioclipse.2.5.0.win32.win32.x86;;.
java.specification.name=Java Platform API Specification
java.class.version=50.0
sun.management.compiler=HotSpot Client Compiler
os.version=5.1
user.home=C:\Documents and Settings\valyo
java.security.policy=jar:file:/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar!/localhost.policy
user.timezone=Europe/Berlin
java.awt.printerjob=sun.awt.windows.WPrinterJob
file.encoding=Cp1252
java.specification.version=1.6
java.class.path=/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.data_0.5.5.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.servi_0.5.3.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.client_0.5.1.201107191712.jar;/C:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/org.eclipse.equinox.common_3.6.0.v20100503.jar;/c:/Documents and Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/org.eclipse.osgi_3.6.2.R36x_v20110210.jar
user.name=valyo
java.vm.specification.version=1.0
sun.java.command=de.walware.rj.servi.internal.NodeController rmi://127.0.0.1:64861/Rconsole-1319534822335 -verbose
java.home=C:\Program Files\Java\jre6
sun.arch.data.model=32
user.language=en
java.specification.vendor=Sun Microsystems Inc.
awt.toolkit=sun.awt.windows.WToolkit
java.vm.info=mixed mode, sharing
java.version=1.6.0_29
java.ext.dirs=C:\Program Files\Java\jre6\lib\ext;C:\WINDOWS\Sun\Java\lib\ext
sun.boot.class.path=C:\Program Files\Java\jre6\lib\resources.jar;C:\Program Files\Java\jre6\lib\rt.jar;C:\Program Files\Java\jre6\lib\sunrsasign.jar;C:\Program Files\Java\jre6\lib\jsse.jar;C:\Program Files\Java\jre6\lib\jce.jar;C:\Program Files\Java\jre6\lib\charsets.jar;C:\Program Files\Java\jre6\lib\modules\jdk.boot.jar;C:\Program Files\Java\jre6\classes
java.vendor=Sun Microsystems Inc.
file.separator=\
java.vendor.url.bug=http://java.sun.com/cgi-bin/bugreport.cgi
sun.io.unicode.encoding=UnicodeLittle
sun.cpu.endian=little
sun.desktop=windows
java.rmi.server.codebase=file:/C:/Documents%20and%20Settings/valyo/Desktop/Bioclipse.2.5.0.win32.win32.x86/plugins/de.walware.rj.server_0.5.5.201107191712.jar
sun.cpu.isalist=pentium_pro+mmx pentium_pro pentium+mmx pentium i486 i386 i86
Oct 25, 2011 11:27:02 AM de.walware.rj.server.srvImpl.AbstractServerControl initVerbose
CONFIG: env variables:
USERPROFILE=C:\Documents and Settings\valyo
PATHEXT=.COM;.EXE;.BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH
JAVA_HOME=C:\Program Files\Java\jre6
TEMP=C:\DOCUME~1\valyo\LOCALS~1\Temp
SystemDrive=C:
ProgramFiles=C:\Program Files
HOMEDRIVE=C:
PROCESSOR_REVISION=2a07
CLIENTNAME=Console
USERDOMAIN=XP
ALLUSERSPROFILE=C:\Documents and Settings\All Users
PROCESSOR_IDENTIFIER=x86 Family 6 Model 42 Stepping 7, GenuineIntel
SESSIONNAME=Console
R_HOME=C:\Program Files\R\R-2.13.1
TMP=C:\DOCUME~1\valyo\LOCALS~1\Temp
LOGONSERVER=\\XP
CommonProgramFiles=C:\Program Files\Common Files
=::=::\
PROCESSOR_ARCHITECTURE=x86
FP_NO_HOST_CHECK=NO
OS=Windows_NT
PATH=C:\Program Files\R\R-2.13.1\bin\i386;C:/Program Files/Java/jre6/bin/client;C:/Program Files/Java/jre6/bin;C:/Program Files/Java/jre6/lib/i386;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\Documents and Settings\valyo\Desktop\Bioclipse.2.5.0.win32.win32.x86;
HOMEPATH=\Documents and Settings\valyo
PROCESSOR_LEVEL=6
COMPUTERNAME=XP
windir=C:\WINDOWS
SystemRoot=C:\WINDOWS
NUMBER_OF_PROCESSORS=1
USERNAME=valyo
ComSpec=C:\WINDOWS\system32\cmd.exe
R_ARCH=/i386
APPDATA=C:\Documents and Settings\valyo\Application Data
Oct 25, 2011 11:27:02 AM de.walware.rj.servi.internal.NodeController start
INFO: [Control:Rconsole-1319534822335] Initializing R node...
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader <init>
CONFIG: System URL classloader: enabled
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader <init>
CONFIG: Alternative classloader: disabled
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader initRLibs
CONFIG: JR library path:
C:/Program Files/R/R-2.13.1/library
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader addClassPath
FINE: Added 'C:\Program Files\R\R-2.13.1\library\rJava\java' to classpath of URL loader
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader <init>
CONFIG: registered JRI: C:\Program Files\R\R-2.13.1\library\rj\jri\i386\jri.dll
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader addClassPath
FINE: Added 'C:\Program Files\R\R-2.13.1\library\rj\jri\JRI.jar' to classpath of URL loader
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader addClassPath
FINE: Added 'C:\Program Files\R\R-2.13.1\library\rj\server\rj.jar' to classpath of URL loader
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader addClassPath
FINE: Added 'C:\Documents and Settings\valyo\Desktop\Bioclipse.2.5.0.win32.win32.x86\plugins\de.walware.rj.server_0.5.5.201107191712.jar' to classpath of URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY org.rosuda.JRI.REXP
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'org.rosuda.JRI.REXP' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY org.rosuda.JRI.RMainLoopCallbacks
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'org.rosuda.JRI.RMainLoopCallbacks' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY org.rosuda.JRI.Rengine
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'org.rosuda.JRI.Rengine' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY org.rosuda.JRI.Mutex
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'org.rosuda.JRI.Mutex' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findLibrary
FINER: ENTRY jri
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findLibrary
FINE: Mapping to C:\Program Files\R\R-2.13.1\library\rj\jri\i386\jri.dll
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY de.walware.rj.server.jri.JRIServer
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'de.walware.rj.server.jri.JRIServer' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY de.walware.rj.server.jri.JRIServer$InitCallbacks
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'de.walware.rj.server.jri.JRIServer$InitCallbacks' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findLibrary
FINER: ENTRY jri
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findLibrary
FINE: Mapping to C:\Program Files\R\R-2.13.1\library\rj\jri\i386\jri.dll
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY org.rosuda.JRI.RConfig
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'org.rosuda.JRI.RConfig' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY de.walware.rj.server.jri.JRIObjectFactory
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'de.walware.rj.server.jri.JRIObjectFactory' using URL loader
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.JRIServer initEngine
FINER: Pointers:
NULL = 0x8f524a0
Unbound = 0x8f52484
MissingArg = 0x8f52468
BaseEnv = 0x8f75348
AutoloadEnv = 0x90de88c
RJTempEnv = 0x9579f44
functionSymbol = 0x8f5d388
ifSymbol = 0x8f5d5d4
AssignSymbol = 0x8f5d334
xSymbol = 0x8f7900c
zSymbol = 0x9136f7c
objectSymbol = 0x9110fc0
envSymbol = 0x8f783c0
nameSymbol = 0x8f52158
realSymbol = 0x90c6e20
imaginarySymbol = 0x957a2c4
newSymbol = 0x91269a4
ClassSymbol = 0x957a254
exprSymbol = 0x8f7d560
errorSymbol = 0x90e39e0
factorClassString = 0x9579018
orderedClassString = 0x9579038
dataframeClassString = 0x9578ff8
lengthFun = 0x8f60578
complexFun = 0x9579e10
envNameFun = 0x957b070
headerFun = 0x957bf04
s4classFun = 0x957bbbc
slotNamesFun = 0x95821dc
ReFun = 0x8f63f8c
ImFun = 0x8f63f38
ItemFun = 0x8f5d104
tryCatchFun = 0x90e79e4
evalTryCatch_errorExpr = 0x9583afc
evalTemp_classExpr = 0x957ead8
evalTemp_rmExpr = 0x957ea98
evalDummyExpr = 0x9584620
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY de.walware.rj.server.jri.JRIVectorImpl
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'de.walware.rj.server.jri.JRIVectorImpl' using URL loader
Oct 25, 2011 11:27:02 AM RJavaClassLoader findClass
FINER: ENTRY de.walware.rj.server.jri.JRICharacterDataImpl
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.loader.JRIClassLoader findClass
FINE: Found class 'de.walware.rj.server.jri.JRICharacterDataImpl' using URL loader
Oct 25, 2011 11:27:02 AM de.walware.rj.server.jri.JRIServer start
INFO: R engine started successfully. New Client-State: 'Connected'.
Oct 25, 2011 11:27:02 AM de.walware.rj.servi.internal.NodeServer start1
FINE: Initializing R node: Loading R package 'rj'...
Oct 25, 2011 11:27:02 AM de.walware.rj.servi.internal.NodeServer start1
FINE: Initializing R node: Preparing R workspace for first client...
Oct 25, 2011 11:27:02 AM de.walware.rj.servi.internal.NodeController start
FINE: [Control:Rconsole-1319534822335] Initializing R node: R engine started and initialized.
Oct 25, 2011 11:27:02 AM de.walware.rj.servi.internal.NodeController start
FINE: [Control:Rconsole-1319534822335] Initializing R node: Publishing in registry...
Oct 25, 2011 11:27:02 AM de.walware.rj.server.srvImpl.AbstractServerControl publishServer
SEVERE: [Control:Rconsole-1319534822335] init server failed.
java.rmi.ServerException: RemoteException occurred in server thread; nested exception is:
java.rmi.UnmarshalException: error unmarshalling arguments; nested exception is:
java.lang.ClassNotFoundException: access to class loader denied
at sun.rmi.server.UnicastServerRef.oldDispatch(Unknown Source)
at sun.rmi.server.UnicastServerRef.dispatch(Unknown Source)
at sun.rmi.transport.Transport$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
at sun.rmi.transport.StreamRemoteCall.exceptionReceivedFromServer(Unknown Source)
at sun.rmi.transport.StreamRemoteCall.executeCall(Unknown Source)
at sun.rmi.server.UnicastRef.invoke(Unknown Source)
at sun.rmi.registry.RegistryImpl_Stub.bind(Unknown Source)
at java.rmi.Naming.bind(Unknown Source)
at de.walware.rj.server.srvImpl.AbstractServerControl.publishServer(AbstractServerControl.java:187)
at de.walware.rj.servi.internal.NodeController.start(NodeController.java:75)
at de.walware.rj.servi.internal.NodeController.main(NodeController.java:48)
Caused by: java.rmi.UnmarshalException: error unmarshalling arguments; nested exception is:
java.lang.ClassNotFoundException: access to class loader denied
at sun.rmi.registry.RegistryImpl_Skel.dispatch(Unknown Source)
at sun.rmi.server.UnicastServerRef.oldDispatch(Unknown Source)
at sun.rmi.server.UnicastServerRef.dispatch(Unknown Source)
at sun.rmi.transport.Transport$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(Unknown Source)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Caused by: java.lang.ClassNotFoundException: access to class loader denied
at sun.rmi.server.LoaderHandler.loadProxyClass(Unknown Source)
at java.rmi.server.RMIClassLoader$2.loadProxyClass(Unknown Source)
at java.rmi.server.RMIClassLoader.loadProxyClass(Unknown Source)
at sun.rmi.server.MarshalInputStream.resolveProxyClass(Unknown Source)
at java.io.ObjectInputStream.readProxyDesc(Unknown Source)
at java.io.ObjectInputStream.readClassDesc(Unknown Source)
at java.io.ObjectInputStream.readOrdinaryObject(Unknown Source)
at java.io.ObjectInputStream.readObject0(Unknown Source)
at java.io.ObjectInputStream.readObject(Unknown Source)
... 12 more
Caused by: java.security.AccessControlException: access denied (java.io.FilePermission \C:\Documents and Settings\valyo\Desktop\Bioclipse.2.5.0.win32.win32.x86\plugins\- read)
at java.security.AccessControlContext.checkPermission(Unknown Source)
at java.security.AccessController.checkPermission(Unknown Source)
at java.lang.SecurityManager.checkPermission(Unknown Source)
at sun.rmi.server.LoaderHandler$Loader.checkPermissions(Unknown Source)
at sun.rmi.server.LoaderHandler$Loader.access$000(Unknown Source)
... 21 more
Oct 25, 2011 11:27:02 AM de.walware.rj.server.srvImpl.AbstractServerControl checkCleanup
INFO: [Control:Rconsole-1319534822335] cleaning up server resources...
</LOG>
--------
at de.walware.rj.servi.internal.LocalNodeFactory.createNode(LocalNodeFactory.java:473)
at de.walware.rj.servi.internal.EmbeddedManager.start(EmbeddedManager.java:83)
at net.bioclipse.r.RServiManager.startEmbedded(RServiManager.java:177)
at net.bioclipse.r.RServiManager.setEmbedded(RServiManager.java:119)
at net.bioclipse.r.business.RBusinessManager.<init>(RBusinessManager.java:89)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(Unknown Source)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(Unknown Source)
at java.lang.reflect.Constructor.newInstance(Unknown Source)
at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:83)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:61)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:807)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:769)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:412)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory$1.run(AbstractAutowireCapableBeanFactory.java:383)
at java.security.AccessController.doPrivileged(Native Method)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:353)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:245)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:169)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:242)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:164)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:269)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:104)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1172)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:940)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:437)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory$1.run(AbstractAutowireCapableBeanFactory.java:383)
at java.security.AccessController.doPrivileged(Native Method)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:353)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:245)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:169)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:242)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:164)
at org.springframework.beans.factory.support.AbstractBeanFactory.isSingleton(AbstractBeanFactory.java:348)
at org.springframework.osgi.service.exporter.support.OsgiServiceFactoryBean.afterPropertiesSet(OsgiServiceFactoryBean.java:179)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1288)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1257)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:438)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory$1.run(AbstractAutowireCapableBeanFactory.java:383)
at java.security.AccessController.doPrivileged(Native Method)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:353)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:245)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:169)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:242)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:164)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:394)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:736)
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.completeRefresh(AbstractDelegatedExecutionApplicationContext.java:251)
at org.springframework.osgi.extender.internal.dependencies.startup.DependencyWaiterApplicationContextExecutor$CompleteRefreshTask.run(DependencyWaiterApplicationContextExecutor.java:136)
at java.lang.Thread.run(Unknown Source)
Caused by: de.walware.rj.RjException: R node process stopped (exit code = 156).
at de.walware.rj.servi.internal.LocalNodeFactory.createNode(LocalNodeFactory.java:393)
... 49 more
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment