submit_script2.sh

#!/bin/bash
### Begin BSUB Options
#BSUB -P GEN135
#BSUB -J sgd_out
#BSUB -W 1:59
#BSUB -nnodes 1
#BSUB -alloc_flags "smt1"
### End BSUB Options and begin shell commands

export folder_name="/gen135"
export output_dir="$MEMBERWORK$folder_name"

export executable="/autofs/nccsopen-svm1_home/vamatya/vector-function/src/bm_apps/build/StandaloneProto"

for bus in 10
    #100 1000 10000 10000 100000
do
    for threads in 16
    #2 4 8 16 32
    do
        outputfile=${output_dir}/standalone_Nbus_${bus}_threads_${threads}
        #touch ${outputfile}
        inputfile=${output_dir}/configuration.cfg.numBus_${bus}
        matrixfile=${output_dir}/spmat.iajaa.numBus_${bus}

        export OMP_NUM_THREADS=$threads
        jsrun --nrs 1 --tasks_per_rs 1 --cpu_per_rs $threads --gpu_per_rs 1 --rs_per_host 1 --latency_priority CPU-CPU --launch_distribution packed --bind rs js_task_info $executable -f ${inputfile} -m ${matrixfile} > ${outputfile}
    done

done