vanzod/Octopus-9.1-foss-2019a_partial.log

## Octopus-9.1-foss-2019a_partial.log
== 2019-09-13 10:17:25,556 easyblock.py:279 INFO This is EasyBuild 4.0.0.dev0-rff5cd17b15e0aa9913ba1d5e6293ce7d5d502582 (framework: 4.0.0.dev0-re1adb9c9af3bfe0f1cc308a2a68068872fcbd4b1, easyblocks: 4.0.0.dev0-rff5cd17b15e0aa9913ba1d5e6293ce7d5d502582) on host cermis.
== 2019-09-13 10:17:25,556 easyblock.py:285 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.pyo)
== 2019-09-13 10:17:25,556 easyblock.py:840 INFO Build dir set to /tmp/Octopus/9.1/foss-2019a
== 2019-09-13 10:17:25,556 config.py:539 DEBUG software install path as specified by 'installpath_software': /opt/easybuild/software
== 2019-09-13 10:17:25,556 easyconfig.py:2310 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
== 2019-09-13 10:17:25,556 toolchain.py:487 DEBUG Toolchain definition for {'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-09-13 10:17:25,557 toolchain.py:59 DEBUG Obtained details for 'GCC' in toolchain '{'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}' from cache
== 2019-09-13 10:17:25,557 toolchain.py:125 DEBUG Found compilers [{'external_module_metadata': {}, 'short_mod_name': 'GCC/8.2.0-2.31.1', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'GCC', 'full_mod_name': 'Core/GCC/8.2.0-2.31.1', 'system': True, 'build_only': False, 'versionsuffix': '', 'version': '8.2.0-2.31.1', 'toolchain_inherited': True, 'hidden': False, 'external_module': False}] for toolchain foss ({'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True})
== 2019-09-13 10:17:25,557 toolchain.py:487 DEBUG Toolchain definition for {'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-09-13 10:17:25,557 toolchain.py:59 DEBUG Obtained details for 'OpenMPI' in toolchain '{'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}' from cache
== 2019-09-13 10:17:25,557 easyconfig.py:2316 DEBUG Obtained subdir MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1
== 2019-09-13 10:17:25,558 easyblock.py:900 INFO Software install dir set to /opt/easybuild/software/MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1
== 2019-09-13 10:17:25,558 config.py:539 DEBUG modules install path as specified by 'installpath_modules': /opt/easybuild/modules
== 2019-09-13 10:17:25,558 easyblock.py:905 INFO Module install dir set to /opt/easybuild/modules/all
== 2019-09-13 10:17:25,558 easyblock.py:264 INFO Init completed for application name Octopus version 9.1
== 2019-09-13 10:17:25,558 easyblock.py:3023 INFO Obtained application instance of for Octopus (easyblock: ConfigureMake)
== 2019-09-13 10:17:25,558 easyblock.py:3036 DEBUG Skip set to False
== 2019-09-13 10:17:25,558 templates.py:161 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
== 2019-09-13 10:17:25,559 templates.py:188 DEBUG version found in easyconfig is 9.1
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: github_account, config: %(namelower)s
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: name, config: Octopus
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: version, config: 9.1
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: versionsuffix, config:
== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: versionprefix, config:
== 2019-09-13 10:17:25,560 one.py:149 INFO Skipping reformatting value for parameter 'toolchain'
== 2019-09-13 10:17:25,560 one.py:149 INFO Skipping reformatting value for parameter 'toolchainopts'
== 2019-09-13 10:17:25,561 easyconfig.py:1108 DEBUG Dumped easyconfig: easyblock = 'ConfigureMake'

name = 'Octopus'
version = '9.1'

homepage = 'http://octopus-code.org'
description = """Octopus is a scientific program aimed at the ab initio virtual experimentation
on a hopefully ever-increasing range of system types. Electrons are described quantum-mechanically
within density-functional theory (DFT), in its time-dependent form (TDDFT) when doing simulations
in time. Nuclei are described classically as point particles.
Electron-nucleus interaction is described within the pseudopotential approximation."""

toolchain = {'name': 'foss', 'version': '2019a'}
toolchainopts = {'opt': True, 'usempi': True}

source_urls = ['http://www.tddft.org/programs/%(namelower)s/down.php?file=%(version)s/']
sources = [SOURCELOWER_TAR_GZ]
checksums = ['62f73d92d2fc5ddf3554337da2333eb35a97db57088950f31eda6fa5e03d6a33']

builddependencies = [
    ('Perl', '5.28.1', '', ('GCCcore', '8.2.0')),
]
dependencies = [
    ('libxc', '4.3.4', '', ('GCC', '8.2.0-2.31.1')),
    ('libvdwxc', '0.4.0'),
    ('PSolver', '1.7.7'),
    ('ETSF_IO', '1.0.4'),
    ('GSL', '2.5', '', ('GCC', '8.2.0-2.31.1')),
    ('ParMETIS', '4.0.3', '', ('gompi', '2019a')),
    ('arpack-ng', '3.6.2'),
    ('libgd', '2.2.5', '', ('GCCcore', '8.2.0')),
]

configopts = '--disable-openmp --enable-mpi --with-libxc-prefix=$EBROOTLIBXC --with-libvdwxc-prefix=$EBROOTLIBVDWXC --with-blas="-L$BLAS_LIB_DIR $LIBBLAS" --with-blacs="$EBROOTSCALAPACK/lib/libscalapack.a" --with-scalapack="$EBROOTSCALAPACK/lib/libscalapack.a" --with-netcdf-prefix=$EBROOTNETCDFMINFORTRAN --with-etsf-io-prefix=$EBROOTETSF_IO --with-fftw-prefix=$EBROOTFFTW --with-isf-prefix=$EBROOTPSOLVER FCFLAGS="$FCFLAGS -ffree-line-length-none" FCCPP="/lib/cpp -C -ffreestanding -Dvector=vector" '

# Run only the short tests, as the full testsuite can take a lot of time.
runtest = 'MPIEXEC="`which mpirun` --bind-to none" check-short'

sanity_check_paths = {
    'files': ['bin/%(namelower)s'],
    'dirs': ['share/%(namelower)s'],
}

moduleclass = 'phys'

== 2019-09-13 10:17:25,561 filetools.py:1263 INFO Creating directory /tmp/eb-BI7h0Q/reprod_20190913101725_24373 (parents: True, set_gid: False, sticky: False)
== 2019-09-13 10:17:25,561 easyblock.py:3196 INFO Dumped easyconfig instance to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/Octopus-9.1-foss-2019a.eb
== 2019-09-13 10:17:25,561 filetools.py:1263 INFO Creating directory /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks (parents: True, set_gid: False, sticky: False)
== 2019-09-13 10:17:25,562 filetools.py:1733 INFO /opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks/configuremake.py
== 2019-09-13 10:17:25,562 easyblock.py:3211 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks
== 2019-09-13 10:17:25,562 easyblock.py:1601 INFO Number of iterations to perform for central part of installation procedure: 1
== 2019-09-13 10:17:25,562 build_log.py:260 INFO building and installing MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1...
== 2019-09-13 10:17:25,562 easyblock.py:2793 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
== 2019-09-13 10:17:25,562 build_log.py:260 INFO fetching files...
== 2019-09-13 10:17:25,562 easyblock.py:2801 INFO Starting fetch step
== 2019-09-13 10:17:25,563 templates.py:161 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
== 2019-09-13 10:17:25,563 templates.py:188 DEBUG version found in easyconfig is 9.1
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: github_account, config: %(namelower)s
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: name, config: Octopus
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: version, config: 9.1
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: versionsuffix, config:
== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: versionprefix, config:
== 2019-09-13 10:17:25,564 easyblock.py:2807 INFO Running method fetch_step part of step fetch
== 2019-09-13 10:17:25,564 easyblock.py:1682 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2019-09-13 10:17:25,564 filetools.py:404 INFO Command eb found at /opt/easybuild/EB-develop/easybuild-framework/eb
== 2019-09-13 10:17:25,564 tools.py:266 DEBUG Also considering installation prefix /opt/easybuild/EB-develop...
== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/ebfiles_repo/easybuild/easyconfigs
== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-BI7h0Q/files_pr8906/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-BI7h0Q/fake_vsc_Uy42mv/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/git/ext/gitdb/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:275 DEBUG Added /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-framework/easybuild/easyconfigs
== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/vsc-install/lib/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/vsc-base/lib/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/plat-x86_64-linux-gnu/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-tk/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-old/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-dynload/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/local/lib/python2.7/dist-packages/easybuild/easyconfigs
== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/easybuild/easyconfigs
== 2019-09-13 10:17:25,567 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/gitdb/ext/smmap/easybuild/easyconfigs
== 2019-09-13 10:17:25,567 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild/easyconfigs
== 2019-09-13 10:17:25,567 filetools.py:1263 INFO Creating directory /opt/easybuild/sources/o/Octopus (parents: True, set_gid: False, sticky: False)
== 2019-09-13 10:17:25,568 easyblock.py:739 DEBUG Trying to download file octopus-9.1.tar.gz from http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz ...
== 2019-09-13 10:17:25,568 filetools.py:509 DEBUG Trying to download octopus-9.1.tar.gz from http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz
== 2019-09-13 10:17:25,568 filetools.py:516 DEBUG Using timeout of 10 seconds for initiating download
== 2019-09-13 10:17:25,568 filetools.py:1291 DEBUG Not creating existing path /opt/easybuild/sources/o/Octopus
== 2019-09-13 10:17:28,814 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
== 2019-09-13 10:17:28,815 filetools.py:573 INFO Attempt 1 of downloading http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, trying again...
== 2019-09-13 10:17:30,008 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
== 2019-09-13 10:17:30,008 filetools.py:573 INFO Attempt 2 of downloading http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, trying again...
== 2019-09-13 10:17:31,184 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
== 2019-09-13 10:17:31,184 filetools.py:585 WARNING Download of http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, done trying
== 2019-09-13 10:17:31,186 build_log.py:164 ERROR EasyBuild crashed with an error (at easybuild/EB-develop/easybuild-framework/easybuild/base/exceptions.py:124 in __init__): Couldn't find file octopus-9.1.tar.gz anywhere, and downloading it didn't work either... Paths attempted (in order): /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/octopus-9.1.tar.gz, /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/sources/Octopus/octopus-9.1.tar.gz, /opt/easybuild/sources/octopus-9.1.tar.gz, http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz  (at easybuild/EB-develop/easybuild-framework/easybuild/framework/easyblock.py:762 in obtain_file)
== 2019-09-13 10:17:31,186 easyblock.py:3053 WARNING build failed (first 300 chars): Couldn't find file octopus-9.1.tar.gz anywhere, and downloading it didn't work either... Paths attempted (in order): /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1
== 2019-09-13 10:17:31,186 easyblock.py:294 INFO Closing log for application name Octopus version 9.1
	== 2019-09-13 10:17:25,556 easyblock.py:279 INFO This is EasyBuild 4.0.0.dev0-rff5cd17b15e0aa9913ba1d5e6293ce7d5d502582 (framework: 4.0.0.dev0-re1adb9c9af3bfe0f1cc308a2a68068872fcbd4b1, easyblocks: 4.0.0.dev0-rff5cd17b15e0aa9913ba1d5e6293ce7d5d502582) on host cermis.
	== 2019-09-13 10:17:25,556 easyblock.py:285 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.pyo)
	== 2019-09-13 10:17:25,556 easyblock.py:840 INFO Build dir set to /tmp/Octopus/9.1/foss-2019a
	== 2019-09-13 10:17:25,556 config.py:539 DEBUG software install path as specified by 'installpath_software': /opt/easybuild/software
	== 2019-09-13 10:17:25,556 easyconfig.py:2310 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
	== 2019-09-13 10:17:25,556 toolchain.py:487 DEBUG Toolchain definition for {'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
	== 2019-09-13 10:17:25,557 toolchain.py:59 DEBUG Obtained details for 'GCC' in toolchain '{'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}' from cache
	== 2019-09-13 10:17:25,557 toolchain.py:125 DEBUG Found compilers [{'external_module_metadata': {}, 'short_mod_name': 'GCC/8.2.0-2.31.1', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'GCC', 'full_mod_name': 'Core/GCC/8.2.0-2.31.1', 'system': True, 'build_only': False, 'versionsuffix': '', 'version': '8.2.0-2.31.1', 'toolchain_inherited': True, 'hidden': False, 'external_module': False}] for toolchain foss ({'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True})
	== 2019-09-13 10:17:25,557 toolchain.py:487 DEBUG Toolchain definition for {'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
	== 2019-09-13 10:17:25,557 toolchain.py:59 DEBUG Obtained details for 'OpenMPI' in toolchain '{'full_mod_name': 'Core/foss/2019a', 'versionsuffix': '', 'version': '2019a', 'toolchain': {'version': '', 'name': 'system'}, 'name': 'foss', 'short_mod_name': 'foss/2019a', 'hidden': False, 'parsed': True, 'system': True}' from cache
	== 2019-09-13 10:17:25,557 easyconfig.py:2316 DEBUG Obtained subdir MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1
	== 2019-09-13 10:17:25,558 easyblock.py:900 INFO Software install dir set to /opt/easybuild/software/MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1
	== 2019-09-13 10:17:25,558 config.py:539 DEBUG modules install path as specified by 'installpath_modules': /opt/easybuild/modules
	== 2019-09-13 10:17:25,558 easyblock.py:905 INFO Module install dir set to /opt/easybuild/modules/all
	== 2019-09-13 10:17:25,558 easyblock.py:264 INFO Init completed for application name Octopus version 9.1
	== 2019-09-13 10:17:25,558 easyblock.py:3023 INFO Obtained application instance of for Octopus (easyblock: ConfigureMake)
	== 2019-09-13 10:17:25,558 easyblock.py:3036 DEBUG Skip set to False
	== 2019-09-13 10:17:25,558 templates.py:161 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
	== 2019-09-13 10:17:25,559 templates.py:188 DEBUG version found in easyconfig is 9.1
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: bitbucket_account, config: %(namelower)s
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: github_account, config: %(namelower)s
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: name, config: Octopus
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: version, config: 9.1
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: versionsuffix, config:
	== 2019-09-13 10:17:25,559 templates.py:242 DEBUG name: versionprefix, config:
	== 2019-09-13 10:17:25,560 one.py:149 INFO Skipping reformatting value for parameter 'toolchain'
	== 2019-09-13 10:17:25,560 one.py:149 INFO Skipping reformatting value for parameter 'toolchainopts'
	== 2019-09-13 10:17:25,561 easyconfig.py:1108 DEBUG Dumped easyconfig: easyblock = 'ConfigureMake'

	name = 'Octopus'
	version = '9.1'

	homepage = 'http://octopus-code.org'
	description = """Octopus is a scientific program aimed at the ab initio virtual experimentation
	on a hopefully ever-increasing range of system types. Electrons are described quantum-mechanically
	within density-functional theory (DFT), in its time-dependent form (TDDFT) when doing simulations
	in time. Nuclei are described classically as point particles.
	Electron-nucleus interaction is described within the pseudopotential approximation."""

	toolchain = {'name': 'foss', 'version': '2019a'}
	toolchainopts = {'opt': True, 'usempi': True}

	source_urls = ['http://www.tddft.org/programs/%(namelower)s/down.php?file=%(version)s/']
	sources = [SOURCELOWER_TAR_GZ]
	checksums = ['62f73d92d2fc5ddf3554337da2333eb35a97db57088950f31eda6fa5e03d6a33']

	builddependencies = [
	('Perl', '5.28.1', '', ('GCCcore', '8.2.0')),
	]
	dependencies = [
	('libxc', '4.3.4', '', ('GCC', '8.2.0-2.31.1')),
	('libvdwxc', '0.4.0'),
	('PSolver', '1.7.7'),
	('ETSF_IO', '1.0.4'),
	('GSL', '2.5', '', ('GCC', '8.2.0-2.31.1')),
	('ParMETIS', '4.0.3', '', ('gompi', '2019a')),
	('arpack-ng', '3.6.2'),
	('libgd', '2.2.5', '', ('GCCcore', '8.2.0')),
	]

	configopts = '--disable-openmp --enable-mpi --with-libxc-prefix=$EBROOTLIBXC --with-libvdwxc-prefix=$EBROOTLIBVDWXC --with-blas="-L$BLAS_LIB_DIR $LIBBLAS" --with-blacs="$EBROOTSCALAPACK/lib/libscalapack.a" --with-scalapack="$EBROOTSCALAPACK/lib/libscalapack.a" --with-netcdf-prefix=$EBROOTNETCDFMINFORTRAN --with-etsf-io-prefix=$EBROOTETSF_IO --with-fftw-prefix=$EBROOTFFTW --with-isf-prefix=$EBROOTPSOLVER FCFLAGS="$FCFLAGS -ffree-line-length-none" FCCPP="/lib/cpp -C -ffreestanding -Dvector=vector" '

	# Run only the short tests, as the full testsuite can take a lot of time.
	runtest = 'MPIEXEC="`which mpirun` --bind-to none" check-short'

	sanity_check_paths = {
	'files': ['bin/%(namelower)s'],
	'dirs': ['share/%(namelower)s'],
	}

	moduleclass = 'phys'

	== 2019-09-13 10:17:25,561 filetools.py:1263 INFO Creating directory /tmp/eb-BI7h0Q/reprod_20190913101725_24373 (parents: True, set_gid: False, sticky: False)
	== 2019-09-13 10:17:25,561 easyblock.py:3196 INFO Dumped easyconfig instance to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/Octopus-9.1-foss-2019a.eb
	== 2019-09-13 10:17:25,561 filetools.py:1263 INFO Creating directory /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks (parents: True, set_gid: False, sticky: False)
	== 2019-09-13 10:17:25,562 filetools.py:1733 INFO /opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks/configuremake.py
	== 2019-09-13 10:17:25,562 easyblock.py:3211 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-BI7h0Q/reprod_20190913101725_24373/easyblocks
	== 2019-09-13 10:17:25,562 easyblock.py:1601 INFO Number of iterations to perform for central part of installation procedure: 1
	== 2019-09-13 10:17:25,562 build_log.py:260 INFO building and installing MPI/GCC/8.2.0-2.31.1/OpenMPI/3.1.3/Octopus/9.1...
	== 2019-09-13 10:17:25,562 easyblock.py:2793 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
	== 2019-09-13 10:17:25,562 build_log.py:260 INFO fetching files...
	== 2019-09-13 10:17:25,562 easyblock.py:2801 INFO Starting fetch step
	== 2019-09-13 10:17:25,563 templates.py:161 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f99cfe2a590>
	== 2019-09-13 10:17:25,563 templates.py:188 DEBUG version found in easyconfig is 9.1
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: bitbucket_account, config: %(namelower)s
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: github_account, config: %(namelower)s
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: name, config: Octopus
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: version, config: 9.1
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: versionsuffix, config:
	== 2019-09-13 10:17:25,563 templates.py:242 DEBUG name: versionprefix, config:
	== 2019-09-13 10:17:25,564 easyblock.py:2807 INFO Running method fetch_step part of step fetch
	== 2019-09-13 10:17:25,564 easyblock.py:1682 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
	== 2019-09-13 10:17:25,564 filetools.py:404 INFO Command eb found at /opt/easybuild/EB-develop/easybuild-framework/eb
	== 2019-09-13 10:17:25,564 tools.py:266 DEBUG Also considering installation prefix /opt/easybuild/EB-develop...
	== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/ebfiles_repo/easybuild/easyconfigs
	== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
	== 2019-09-13 10:17:25,564 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-BI7h0Q/files_pr8906/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-BI7h0Q/fake_vsc_Uy42mv/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/git/ext/gitdb/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:275 DEBUG Added /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-easyblocks/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild-framework/easybuild/easyconfigs
	== 2019-09-13 10:17:25,565 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/vsc-install/lib/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/vsc-base/lib/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/plat-x86_64-linux-gnu/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-tk/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-old/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/lib-dynload/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/local/lib/python2.7/dist-packages/easybuild/easyconfigs
	== 2019-09-13 10:17:25,566 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/easybuild/easyconfigs
	== 2019-09-13 10:17:25,567 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/dist-packages/gitdb/ext/smmap/easybuild/easyconfigs
	== 2019-09-13 10:17:25,567 tools.py:271 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/EB-develop/easybuild/easyconfigs
	== 2019-09-13 10:17:25,567 filetools.py:1263 INFO Creating directory /opt/easybuild/sources/o/Octopus (parents: True, set_gid: False, sticky: False)
	== 2019-09-13 10:17:25,568 easyblock.py:739 DEBUG Trying to download file octopus-9.1.tar.gz from http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz ...
	== 2019-09-13 10:17:25,568 filetools.py:509 DEBUG Trying to download octopus-9.1.tar.gz from http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz
	== 2019-09-13 10:17:25,568 filetools.py:516 DEBUG Using timeout of 10 seconds for initiating download
	== 2019-09-13 10:17:25,568 filetools.py:1291 DEBUG Not creating existing path /opt/easybuild/sources/o/Octopus
	== 2019-09-13 10:17:28,814 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
	== 2019-09-13 10:17:28,815 filetools.py:573 INFO Attempt 1 of downloading http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, trying again...
	== 2019-09-13 10:17:30,008 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
	== 2019-09-13 10:17:30,008 filetools.py:573 INFO Attempt 2 of downloading http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, trying again...
	== 2019-09-13 10:17:31,184 filetools.py:564 WARNING IOError occurred while trying to download http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz: <urlopen error [Errno 113] No route to host>
	== 2019-09-13 10:17:31,184 filetools.py:585 WARNING Download of http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz to /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz failed, done trying
	== 2019-09-13 10:17:31,186 build_log.py:164 ERROR EasyBuild crashed with an error (at easybuild/EB-develop/easybuild-framework/easybuild/base/exceptions.py:124 in __init__): Couldn't find file octopus-9.1.tar.gz anywhere, and downloading it didn't work either... Paths attempted (in order): /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/Octopus/octopus-9.1.tar.gz, /opt/easybuild/ebfiles_repo/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/Octopus/octopus-9.1.tar.gz, /opt/easybuild/EB-develop/easybuild-easyconfigs/easybuild/easyconfigs/octopus-9.1.tar.gz, /opt/easybuild/sources/o/Octopus/octopus-9.1.tar.gz, /opt/easybuild/sources/Octopus/octopus-9.1.tar.gz, /opt/easybuild/sources/octopus-9.1.tar.gz, http://www.tddft.org/programs/octopus/down.php?file=9.1/octopus-9.1.tar.gz (at easybuild/EB-develop/easybuild-framework/easybuild/framework/easyblock.py:762 in obtain_file)
	== 2019-09-13 10:17:31,186 easyblock.py:3053 WARNING build failed (first 300 chars): Couldn't find file octopus-9.1.tar.gz anywhere, and downloading it didn't work either... Paths attempted (in order): /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/o/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/Octopus/octopus-9.1.tar.gz, /tmp/eb-BI7h0Q/files_pr8906/o/Octopus/octopus-9.1
	== 2019-09-13 10:17:31,186 easyblock.py:294 INFO Closing log for application name Octopus version 9.1