verdurin/FFTW-3.3.7-gompi-2018a_partial.log

## FFTW-3.3.7-gompi-2018a_partial.log
== 2018-01-12 17:57:36,086 easyblock.py:264 INFO This is EasyBuild 3.5.0 (framework: 3.5.0, easyblocks: 3.5.0) on host rescomp2.
== 2018-01-12 17:57:36,086 easyblock.py:270 INFO This is easyblock EB_FFTW from module easybuild.easyblocks.fftw (/well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_easyblocks-3.5.0-py2.7.egg/easybuild/easyblocks/f/fftw.pyo)
== 2018-01-12 17:57:36,086 easyblock.py:815 INFO Build dir set to /dev/shm/FFTW/3.3.7/gompi-2018a
== 2018-01-12 17:57:36,086 config.py:460 DEBUG software install path as specified by 'installpath' and 'subdir_software': /well/rescomp/eb/software
== 2018-01-12 17:57:36,087 easyconfig.py:1688 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,087 easyconfig.py:1694 DEBUG Obtained subdir FFTW/3.3.7-gompi-2018a
== 2018-01-12 17:57:36,087 easyblock.py:856 INFO Software install dir set to /well/rescomp/eb/software/FFTW/3.3.7-gompi-2018a
== 2018-01-12 17:57:36,087 config.py:460 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /well/rescomp/eb/modules
== 2018-01-12 17:57:36,087 easyblock.py:861 INFO Module install dir set to /well/rescomp/eb/modules/all
== 2018-01-12 17:57:36,087 easyblock.py:249 INFO Init completed for application name FFTW version 3.3.7
== 2018-01-12 17:57:36,088 systemtools.py:211 DEBUG Determined CPU architecture: x86_64
== 2018-01-12 17:57:36,088 fftw.py:117 INFO CPU features considered for auto-detection: ['avx', 'avx2', 'avx512', 'fma4', 'sse2', 'vsx', 'altivec', 'asimd', 'neon', 'sse']
== 2018-01-12 17:57:36,088 systemtools.py:400 DEBUG Trying to determine CPU features on Linux via /proc/cpuinfo
== 2018-01-12 17:57:36,089 systemtools.py:407 DEBUG Found CPU features using regex '^(?:flags|[fF]eatures)\s*:\s*(?P<flags>.*)': ['acpi', 'aes', 'aperfmperf', 'apic', 'arat', 'arch_perfmon', 'avx', 'bts', 'clflush', 'cmov', 'constant_tsc', 'cx16', 'cx8', 'dca', 'de', 'ds_cpl', 'dtes64', 'dtherm', 'dts', 'epb', 'ept', 'erms', 'est', 'f16c', 'flexpriority', 'fpu', 'fsgsbase', 'fxsr', 'ht', 'ida', 'lahf_lm', 'lm', 'mca', 'mce', 'mmx', 'monitor', 'msr', 'mtrr', 'nonstop_tsc', 'nx', 'pae', 'pat', 'pbe', 'pcid', 'pclmulqdq', 'pdcm', 'pdpe1gb', 'pebs', 'pge', 'pln', 'pni', 'popcnt', 'pse', 'pse36', 'pts', 'rdrand', 'rdtscp', 'rep_good', 'sep', 'smep', 'smx', 'ss', 'sse', 'sse2', 'sse4_1', 'sse4_2', 'ssse3', 'syscall', 'tm', 'tm2', 'tpr_shadow', 'tsc', 'tsc_deadline_timer', 'vme', 'vmx', 'vnmi', 'vpid', 'x2apic', 'xsave', 'xsaveopt', 'xtopology', 'xtpr']
== 2018-01-12 17:57:36,089 fftw.py:126 INFO List of available CPU features: ['acpi', 'aes', 'aperfmperf', 'apic', 'arat', 'arch_perfmon', 'avx', 'bts', 'clflush', 'cmov', 'constant_tsc', 'cx16', 'cx8', 'dca', 'de', 'ds_cpl', 'dtes64', 'dtherm', 'dts', 'epb', 'ept', 'erms', 'est', 'f16c', 'flexpriority', 'fpu', 'fsgsbase', 'fxsr', 'ht', 'ida', 'lahf_lm', 'lm', 'mca', 'mce', 'mmx', 'monitor', 'msr', 'mtrr', 'nonstop_tsc', 'nx', 'pae', 'pat', 'pbe', 'pcid', 'pclmulqdq', 'pdcm', 'pdpe1gb', 'pebs', 'pge', 'pln', 'pni', 'popcnt', 'pse', 'pse36', 'pts', 'rdrand', 'rdtscp', 'rep_good', 'sep', 'smep', 'smx', 'ss', 'sse', 'sse2', 'sse4_1', 'sse4_2', 'ssse3', 'syscall', 'tm', 'tm2', 'tpr_shadow', 'tsc', 'tsc_deadline_timer', 'vme', 'vmx', 'vnmi', 'vpid', 'x2apic', 'xsave', 'xsaveopt', 'xtopology', 'xtpr']
== 2018-01-12 17:57:36,089 fftw.py:131 INFO Enabling use of AVX (should be supported based on CPU features)
== 2018-01-12 17:57:36,089 fftw.py:131 INFO Enabling use of SSE2 (should be supported based on CPU features)
== 2018-01-12 17:57:36,090 fftw.py:131 INFO Enabling use of SSE (should be supported based on CPU features)
== 2018-01-12 17:57:36,090 easyblock.py:2659 INFO Obtained application instance of for FFTW (easyblock: None)
== 2018-01-12 17:57:36,090 easyblock.py:2672 DEBUG Skip set to False
== 2018-01-12 17:57:36,090 systemtools.py:211 DEBUG Determined CPU architecture: x86_64
== 2018-01-12 17:57:36,090 systemtools.py:211 DEBUG Determined CPU architecture: x86_64
== 2018-01-12 17:57:36,091 systemtools.py:211 DEBUG Determined CPU architecture: x86_64
== 2018-01-12 17:57:36,091 systemtools.py:211 DEBUG Determined CPU architecture: x86_64
== 2018-01-12 17:57:36,091 fftw.py:204 DEBUG List of configure options to iterate over: ['--enable-single --enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads --enable-avx --enable-sse2 --enable-sse ', '--enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads --enable-avx --enable-sse2 ', '--enable-long-double --enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads ', '--enable-quad-precision --with-pic --enable-openmp --enable-shared --enable-threads ']
== 2018-01-12 17:57:36,091 build_log.py:233 INFO building and installing FFTW/3.3.7-gompi-2018a...
== 2018-01-12 17:57:36,092 easyblock.py:2438 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2018-01-12 17:57:36,092 build_log.py:233 INFO fetching files...
== 2018-01-12 17:57:36,092 easyblock.py:2446 INFO Starting fetch step
== 2018-01-12 17:57:36,092 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,092 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,092 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,092 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,093 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,093 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,093 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,093 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,093 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,093 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,093 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,094 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,094 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,094 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,094 easyblock.py:2452 INFO Running method fetch_step part of step fetch
== 2018-01-12 17:57:36,094 easyblock.py:1557 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2018-01-12 17:57:36,095 filetools.py:343 INFO Command eb found at /well/rescomp/eb/software/EasyBuild/3.5.0/bin/eb
== 2018-01-12 17:57:36,095 tools.py:263 DEBUG Also considering installation prefix /gpfs2/well/rescomp/eb/software/EasyBuild/3.5.0...
== 2018-01-12 17:57:36,095 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /gpfs0/users/rescomp/adamh/src/github/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2018-01-12 17:57:36,095 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/src/github/easybuild-easyconfigs/easybuild/easyconfigs
== 2018-01-12 17:57:36,095 tools.py:272 DEBUG Added /users/rescomp/adamh/src/github/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2018-01-12 17:57:36,095 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/ebfiles_repo/easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.0-py2.7.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-sUGKFn/files_pr5577/easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/GitPython-2.1.7-py2.7.egg/git/ext/gitdb/easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/setuptools-18.1-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,096 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/ecdsa-0.13-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/paramiko-1.15.2-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/prettytable-0.7.2-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/pyCLI-devel-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/SQLAlchemy-1.0.8-py2.7-linux-x86_64.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/parsedatetime-1.5-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,097 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/boto-2.38.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/pip-7.1.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/Babel-2.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/simplejson-3.8.0-py2.7-linux-x86_64.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/requests-2.7.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/iso8601-0.1.10-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,098 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/argparse-1.3.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/six-1.9.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/gc3pie-2.4.2-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/vsc_install-0.10.26-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_framework-3.5.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,099 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_easyblocks-3.5.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.0-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:272 DEBUG Added /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.0-py2.7.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/GitPython-2.1.7-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/gitdb2-2.0.3-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/smmap2-2.0.3-py2.7.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,100 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/site-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/site-packages/pysam-0.9.0-py2.7-linux-x86_64.egg/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/EasyBuild/3.5.0/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python27.zip/easybuild/easyconfigs
== 2018-01-12 17:57:36,101 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/plat-linux2/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/lib-tk/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/lib-old/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/lib-dynload/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /apps/well/python/2.7.11/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,102 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /well/rescomp/eb/software/GC3Pie/2.4.2/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2018-01-12 17:57:36,103 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /users/rescomp/adamh/.local/lib/python2.7/site-packages/gitdb2-2.0.3-py2.7.egg/gitdb/ext/smmap/easybuild/easyconfigs
== 2018-01-12 17:57:36,103 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /gpfs2/well/rescomp/eb/software/EasyBuild/3.5.0/easybuild/easyconfigs
== 2018-01-12 17:57:36,128 easyblock.py:646 INFO Found file fftw-3.3.7.tar.gz at /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz
== 2018-01-12 17:57:36,128 easyblock.py:362 DEBUG File /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz found for source fftw-3.3.7.tar.gz
== 2018-01-12 17:57:36,128 easyblock.py:374 INFO Added sources: [{'path': '/well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/FFTW/3.3.7/gompi-2018a', 'name': 'fftw-3.3.7.tar.gz', 'checksum': '3b609b7feba5230e8f6dd8d245ddbefac324c5a6ae4186947670d9ac2cd25573'}]
== 2018-01-12 17:57:36,128 easyblock.py:1598 INFO no patches provided
== 2018-01-12 17:57:36,129 filetools.py:652 DEBUG Using blocksize 16777216 for calculating the checksum
== 2018-01-12 17:57:36,170 easyblock.py:1608 INFO md5 checksum for /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz: 0d5915d7d39b3253c1cc05030d79ac47
== 2018-01-12 17:57:36,171 filetools.py:652 DEBUG Using blocksize 16777216 for calculating the checksum
== 2018-01-12 17:57:36,189 easyblock.py:1608 INFO sha256 checksum for /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz: 3b609b7feba5230e8f6dd8d245ddbefac324c5a6ae4186947670d9ac2cd25573
== 2018-01-12 17:57:36,190 easyconfig.py:1676 DEBUG Determining full module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50> (force_visible: False)
== 2018-01-12 17:57:36,190 easyconfig.py:1656 DEBUG No alternative software name specified to determine module name with
== 2018-01-12 17:57:36,190 utilities.py:103 DEBUG Module name FFTW/3.3.7-gompi-2018a validated
== 2018-01-12 17:57:36,190 easyconfig.py:1683 DEBUG Obtained valid full module name FFTW/3.3.7-gompi-2018a
== 2018-01-12 17:57:36,190 config.py:460 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /well/rescomp/eb/modules
== 2018-01-12 17:57:36,190 easyblock.py:1641 INFO Checking dirs that need to be created: ['/well/rescomp/eb/software/FFTW/3.3.7-gompi-2018a', '/well/rescomp/eb/modules/all/FFTW', '/well/rescomp/eb/modules/numlib/FFTW']
== 2018-01-12 17:57:36,194 filetools.py:1107 INFO Creating directory /well/rescomp/eb/software/FFTW/3.3.7-gompi-2018a (parents: True, set_gid: False, sticky: False)
== 2018-01-12 17:57:36,195 filetools.py:1135 DEBUG Not creating existing path /well/rescomp/eb/modules/all/FFTW
== 2018-01-12 17:57:36,196 filetools.py:1135 DEBUG Not creating existing path /well/rescomp/eb/modules/numlib/FFTW
== 2018-01-12 17:57:36,196 easyblock.py:2438 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2018-01-12 17:57:36,196 build_log.py:233 INFO creating build dir, resetting environment...
== 2018-01-12 17:57:36,196 easyblock.py:2446 INFO Starting ready step
== 2018-01-12 17:57:36,196 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,197 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,197 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,197 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,197 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,197 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,197 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,197 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,197 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,198 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,198 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,198 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,198 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,198 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,198 easyblock.py:2452 INFO Running method check_readiness_step part of step ready
== 2018-01-12 17:57:36,198 easyblock.py:1502 DEBUG Desired parallelism specified via 'parallel' build option: None
== 2018-01-12 17:57:36,199 affinity.py:211 DEBUG sched_getaffinity for pid 15154 returned cpuset 0-15
== 2018-01-12 17:57:36,199 run.py:83 DEBUG Using cached value for command 'ulimit -u': ('1024\n', 0)
== 2018-01-12 17:57:36,200 easyblock.py:1505 INFO Setting parallelism: 16
== 2018-01-12 17:57:36,200 modules.py:641 DEBUG Current MODULEPATH: /well/rescomp/eb/modules/all:/gpfs0/mgmt/modules/Modules/$MODULE_VERSION/modulefiles:/gpfs0/mgmt/modules/Modules/modulefiles:/mgmt/modules/eb/modules/all:/users/rescomp/adamh/.local/easybuild/modules/all
== 2018-01-12 17:57:36,200 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '/well/rescomp/eb/software/GC3Pie/2.4.2/lib' to '/well/rescomp/eb/software/GC3Pie/2.4.2/lib' in environment for module command
== 2018-01-12 17:57:36,200 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2018-01-12 17:57:36,200 modules.py:652 DEBUG Running module command '/gpfs0/mgmt/modules/Modules/3.2.10/bin/modulecmd python --terse list' from /tmp/eb-sUGKFn/tmpagIkrT/easybuilders
== 2018-01-12 17:57:36,210 modules.py:658 DEBUG Output of module command '/gpfs0/mgmt/modules/Modules/3.2.10/bin/modulecmd python --terse list': stdout: ; stderr: Currently Loaded Modulefiles:
python/2.7.11
EasyBuild/3.5.0
GC3Pie/2.4.2

== 2018-01-12 17:57:36,210 modules.py:590 DEBUG No checking of module output implemented for EnvironmentModulesC
== 2018-01-12 17:57:36,211 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/well/rescomp/eb/software/GC3Pie/2.4.2/lib'] to ['/well/rescomp/eb/software/GC3Pie/2.4.2/lib']
== 2018-01-12 17:57:36,211 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /well/rescomp/eb/software/GC3Pie/2.4.2/lib (previous value: '/well/rescomp/eb/software/GC3Pie/2.4.2/lib')
== 2018-01-12 17:57:36,211 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2018-01-12 17:57:36,211 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2018-01-12 17:57:36,211 easyblock.py:1510 WARNING Loaded modules detected: ['python/2.7.11', 'EasyBuild/3.5.0', 'GC3Pie/2.4.2']
== 2018-01-12 17:57:36,212 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: []
== 2018-01-12 17:57:36,212 toolchain.py:376 DEBUG add_dependencies: adding toolchain dependencies []
== 2018-01-12 17:57:36,212 toolchain.py:386 DEBUG add_dependencies: MODULEPATH: /well/rescomp/eb/modules/all:/gpfs0/mgmt/modules/Modules/$MODULE_VERSION/modulefiles:/gpfs0/mgmt/modules/Modules/modulefiles:/mgmt/modules/eb/modules/all:/users/rescomp/adamh/.local/easybuild/modules/all
== 2018-01-12 17:57:36,212 modules.py:422 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/well/rescomp/eb/modules/all:/gpfs0/mgmt/modules/Modules/$MODULE_VERSION/modulefiles:/gpfs0/mgmt/modules/Modules/modulefiles:/mgmt/modules/eb/modules/all:/users/rescomp/adamh/.local/easybuild/modules/all', 'modulecmd', '')': ['ASE/3.15.0-intel-2017b-Python-2.7.14', 'Autoconf/2.69-GCC-5.4.0-2.26', 'Autoconf/2.69-GCCcore-6.3.0', 'Autoconf/2.69-GCCcore-6.4.0', 'Autoconf/2.69-GCCcore-7.2.0', 'Automake/1.15-GCC-5.4.0-2.26', 'Automake/1.15-GCCcore-6.3.0', 'Automake/1.15.1-GCCcore-6.4.0', 'Automake/1.15.1-GCCcore-7.2.0', 'Autotools/20150215-GCC-5.4.0-2.26', 'Autotools/20150215-GCCcore-6.3.0', 'Autotools/20170619-GCCcore-6.4.0', 'Autotools/20170619-GCCcore-7.2.0', 'BEDTools/2.26.0-intel-2017b', 'BEDTools/2.27.1-intel-2017a', 'BLAST+/2.7.1-intel-2017b-Python-2.7.14', 'BWA/0.7.17-intel-2017b', 'BamTools/2.5.0-intel-2017b', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-5.4.0', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-GCCcore-6.4.0', 'Bison/3.0.4-GCCcore-7.2.0', 'Blosc/1.12.1-intel-2017a', 'Boost/1.63.0-intel-2017b-Python-2.7.14', 'Boost/1.65.1-intel-2017b', 'Bowtie/1.2.1.1-intel-2017b', 'Bowtie2/2.3.3.1-intel-2017b', 'CFITSIO/3.42-intel-2017b', 'CIRCexplorer/1.1.10-intel-2017b-Python-2.7.14', 'CIRCexplorer2/2.3.2-intel-2017b-Python-2.7.14', 'CIRI/2.0.6-intel-2017b-Perl-5.26.0', 'CLHEP/2.4.0.0-intel-2017b', 'CMake/3.10.0-GCCcore-6.4.0', 'CMake/3.10.1-GCCcore-6.4.0', 'CMake/3.6.1-GCC-5.4.0-2.26', 'CMake/3.7.2-GCCcore-6.3.0', 'CMake/3.8.0-GCCcore-6.3.0', 'CMake/3.8.1-GCCcore-6.3.0', 'CMake/3.9.1-GCCcore-6.3.0', 'CMake/3.9.1-GCCcore-6.4.0', 'CMake/3.9.5-GCCcore-6.4.0', 'CMake/3.9.5-GCCcore-7.2.0', 'CUDA/9.0.176', 'Caffe/1.0-intel-2017a-Python-2.7.13', 'Calendrical/2.0.1-intel-2017b-Python-3.6.3', 'Clang/5.0.0-GCC-6.4.0-2.28', 'Cufflinks/2.2.1-intel-2017b', 'Doxygen/1.8.13-GCCcore-6.3.0', 'Doxygen/1.8.13-GCCcore-6.4.0', 'EasyBuild/3.4.1', 'EasyBuild/3.5.0', 'Eigen/3.3.4', 'FFTW/3.3.6-intel-2017a', 'FFTW/3.3.6-intel-2017b', 'FFTW/3.3.7-intel-2017b', 'FFmpeg/3.4.1-intel-2017b', 'FLTK/1.3.4-intel-2017a', 'FastaIndex/0.11rc7-intel-2017b-Python-2.7.14', 'GATE/8.0-intel-2017b-Python-2.7.14-Geant4-10.04', 'GC3Pie/2.4.2', 'GCC/5.4.0-2.26', 'GCC/6.4.0-2.28', 'GCC/7.2.0-2.29', 'GCCcore/5.4.0', 'GCCcore/6.3.0', 'GCCcore/6.4.0', 'GCCcore/7.2.0', 'GDAL/2.2.2-intel-2017b-Python-2.7.14', 'GEOS/3.6.1-intel-2017a-Python-2.7.13', 'GEOS/3.6.2-intel-2017b-Python-2.7.14', 'GL2PS/1.4.0-intel-2017a', 'GL2PS/1.4.0-intel-2017b', 'GLPK/4.61-intel-2017a', 'GLib/2.52.0-intel-2017a', 'GLib/2.53.5-GCCcore-6.4.0', 'GMP/6.1.1-GCC-5.4.0-2.26', 'GMP/6.1.2-GCCcore-6.3.0', 'GMP/6.1.2-GCCcore-6.4.0', 'GMP/6.1.2-GCCcore-7.2.0', 'GObject-Introspection/1.52.0-intel-2017a', 'GPAW/1.3.0-intel-2017b-Python-2.7.14', 'GROMACS/2016.4-intel-2017a', 'GSL/2.4-GCCcore-6.4.0', 'GapCloser/1.12-r6-intel-2017b', 'Geant4/10.04-intel-2017b', 'Ghostscript/9.21-intel-2017a', 'Ghostscript/9.22-intel-2017b', 'GraphicsMagick/1.3.25-intel-2017a', 'HDF5/1.10.1-intel-2017b', 'HDF5/1.8.18-intel-2017a', 'HDF5/1.8.18-intel-2017a-serial', 'HDF5/1.8.19-intel-2017a', 'HDF5/1.8.20-intel-2017b', 'HarfBuzz/1.3.1-intel-2017a', 'Hyperopt/0.1-intel-2017b-Python-2.7.14', 'ImageMagick/7.0.7-14-intel-2017b', 'JasPer/2.0.14-GCCcore-6.4.0', 'Java/1.8.0_121', 'Java/1.8.0_131', 'Java/1.8.0_152', 'Kent_tools/20171107-linux.x86_64', 'Keras/2.1.1-intel-2017b-Python-2.7.14', 'Keras/2.1.1-intel-2017b-Python-3.6.3', 'LAME/3.100-intel-2017b', 'LAST/914-intel-2017b', 'LLVM/4.0.0-intel-2017a', 'LLVM/5.0.0-intel-2017b', 'LMDB/0.9.18-intel-2017a', 'LMDB/0.9.21-GCCcore-6.4.0', 'LMDB/0.9.21-intel-2017a', 'LZO/2.10-intel-2017a', 'LevelDB/1.18-intel-2017a', 'LibTIFF/4.0.7-intel-2017a', 'LibTIFF/4.0.8-intel-2017a', 'LibTIFF/4.0.8-intel-2017b', 'LibTIFF/4.0.9-intel-2017b', 'LittleCMS/2.9-intel-2017b', 'M4/1.4.17', 'M4/1.4.17-GCC-5.4.0-2.26', 'M4/1.4.17-GCCcore-5.4.0', 'M4/1.4.18', 'M4/1.4.18-GCCcore-6.3.0', 'M4/1.4.18-GCCcore-6.4.0', 'M4/1.4.18-GCCcore-7.2.0', 'METIS/5.1.0-intel-2017a', 'MIRA/4.0.2-intel-2017b', 'MIRA/4.9.6-intel-2017b', 'Mako/1.0.6-intel-2017a-Python-2.7.13', 'Mako/1.0.7-intel-2017b-Python-2.7.14', 'MariaDB-connector-c/2.3.4-intel-2017b', 'Mesa/17.0.2-intel-2017a', 'Mesa/17.2.4-intel-2017b', 'NASM/2.12.02-intel-2017a', 'NASM/2.13.01-GCCcore-6.3.0', 'NASM/2.13.01-GCCcore-6.4.0', 'NLopt/2.4.2-intel-2017a', 'NLopt/2.4.2-intel-2017b', 'Octave/4.2.1-intel-2017a', 'OpenBLAS/0.2.20-GCC-6.4.0-2.28', 'OpenBabel/2.4.1-intel-2017b-Python-2.7.14', 'OpenMM/7.1.1-intel-2017b-Python-3.6.3', 'PCRE/8.40-intel-2017a', 'PCRE/8.41-GCCcore-6.4.0', 'PIMS/0.4.1-intel-2017b-Python-2.7.14', 'PROJ/4.9.3-intel-2017a', 'PROJ/4.9.3-intel-2017b', 'PTESFinder/1-intel-2017b', 'Pango/1.40.5-intel-2017a', 'Perl/5.24.1-GCCcore-6.3.0', 'Perl/5.26.0-GCCcore-6.4.0', 'Perl/5.26.0-intel-2017b', 'Pillow/4.3.0-intel-2017a-Python-2.7.13', 'Pillow/4.3.0-intel-2017b-Python-2.7.14', 'PyTables/3.4.2-intel-2017a-Python-3.6.1', 'PyYAML/3.12-intel-2017b-Python-2.7.14', 'PyYAML/3.12-intel-2017b-Python-3.6.3', 'Pysam/0.13-intel-2017b-Python-2.7.14', 'Pysam/0.13.0-intel-2017b-Python-3.6.3', 'Python/2.7.12-GCC-5.4.0-2.26-bare', 'Python/2.7.13-intel-2017a', 'Python/2.7.14-GCCcore-6.4.0-bare', 'Python/2.7.14-GCCcore-7.2.0-bare', 'Python/2.7.14-intel-2017b', 'Python/3.6.3-intel-2017b', 'Qhull/2015.2-GCCcore-6.4.0', 'Qhull/2015.2-intel-2017a', 'Qt/4.8.7-intel-2017a', 'Qt5/5.8.0-intel-2017a', 'R-bundle-Bioconductor/3.6-intel-2017b-R-3.4.3', 'R/2.15', 'R/2.15.3', 'R/3.0', 'R/3.0.3', 'R/3.1', 'R/3.1.0', 'R/3.1.2', 'R/3.1.3', 'R/3.1.3-atlas-3.10.2-gcc4.7.2', 'R/3.1.3-gcc4.9.3', 'R/3.1.3-openblas-0.2.14-omp-gcc4.7.2', 'R/3.2.0-openblas-0.2.14-omp-gcc4.7.2', 'R/3.2.0-openblas-0.2.14-omp-gcc4.8.2', 'R/3.2.2', 'R/3.2.2-openblas-0.2.14-omp-gcc4.7.2', 'R/3.2.2-openblas-0.2.14-omp-gcc4.8.2', 'R/3.2.5', 'R/3.2.5-openblas-0.2.18-omp-gcc4.7.2', 'R/3.2.5-openblas-0.2.18-omp-gcc4.8.2', 'R/3.3.0', 'R/3.3.0-openblas-0.2.18-omp-gcc4.7.2', 'R/3.3.0-openblas-0.2.18-omp-gcc4.8.2', 'R/3.3.1', 'R/3.3.1-openblas-0.2.18-omp-gcc4.7.2', 'R/3.3.1-openblas-0.2.18-omp-gcc4.8.2', 'R/3.3.1-openblas-0.2.18-omp-gcc4.9.3', 'R/3.3.1-openblas-0.2.18-omp-gcc5.4.0', 'R/3.3.2', 'R/3.3.2-openblas-0.2.18-omp-gcc4.7.2', 'R/3.3.2-openblas-0.2.18-omp-gcc4.8.2', 'R/3.3.2-openblas-0.2.18-omp-gcc4.9.3', 'R/3.3.2-openblas-0.2.18-omp-gcc5.4.0', 'R/3.4.0', 'R/3.4.0-openblas-0.2.18-omp-gcc4.7.2', 'R/3.4.0-openblas-0.2.18-omp-gcc4.8.2', 'R/3.4.0-openblas-0.2.18-omp-gcc4.9.3', 'R/3.4.0-openblas-0.2.18-omp-gcc5.4.0', 'R/3.4.3', 'R/3.4.3-intel-2017b-X11-20171023', 'R/3.4.3-openblas-0.2.18-omp-gcc4.7.2', 'R/3.4.3-openblas-0.2.18-omp-gcc4.8.2', 'R/3.4.3-openblas-0.2.18-omp-gcc4.9.3', 'R/3.4.3-openblas-0.2.18-omp-gcc5.4.0', 'R/3.4.3-openblas-0.2.18-omp-gcc7.2.0', 'R/default', 'ROOT/6.10.08-intel-2017b-Python-2.7.14', 'Redundans/0.13c-intel-2017b', 'SAMtools/0.1.20-intel-2017b', 'SAMtools/1.6-intel-2017b', 'SCons/2.5.1-intel-2017a-Python-2.7.13', 'SCons/3.0.1-intel-2017b-Python-3.6.3', 'SNAP/1.0beta.23-intel-2017b', 'SQLite/3.13.0-GCC-5.4.0-2.26', 'SQLite/3.17.0-GCCcore-6.3.0', 'SQLite/3.20.1-GCCcore-6.4.0', 'SQLite/3.20.1-GCCcore-7.2.0', 'SSPACE_Basic/2.1.1-intel-2017b-Perl-5.26.0', 'STAR/2.5.3a-intel-2017b', 'SWIG/3.0.12-intel-2017a-Python-2.7.13', 'SWIG/3.0.12-intel-2017b-Python-2.7.14', 'SWIG/3.0.12-intel-2017b-Python-3.6.3', 'SuRVoS/20170706', 'SuiteSparse/4.5.5-intel-2017a-METIS-5.1.0', 'Szip/2.1-intel-2017a', 'Szip/2.1.1-GCCcore-6.3.0', 'Szip/2.1.1-GCCcore-6.4.0', 'Tcl/8.6.5-GCC-5.4.0-2.26', 'Tcl/8.6.6-GCCcore-6.3.0', 'Tcl/8.6.7-GCCcore-6.4.0', 'Tcl/8.6.7-GCCcore-7.2.0', 'Theano/1.0.0-intel-2017b-Python-2.7.14', 'Theano/1.0.0-intel-2017b-Python-3.6.3', 'Tk/8.6.5-GCC-5.4.0-2.26', 'Tk/8.6.6-intel-2017a', 'Tk/8.6.7-intel-2017b', 'TopHat/2.1.1-intel-2017b', 'Valgrind/3.13.0-intel-2017b', 'X11/20170314-GCCcore-6.3.0', 'X11/20171023-GCCcore-6.4.0', 'XML-Parser/2.44_01-GCCcore-6.3.0-Perl-5.24.1', 'XML-Parser/2.44_01-GCCcore-6.4.0-Perl-5.26.0', 'XZ/5.2.2-GCC-5.4.0-2.26', 'XZ/5.2.3-GCCcore-6.3.0', 'XZ/5.2.3-GCCcore-6.4.0', 'XZ/5.2.3-GCCcore-7.2.0', 'Yasm/1.3.0-GCCcore-6.4.0', 'amber/14-gcc4.9.1-mkl', 'amber/16-gcc5.4.0-mkl', 'amber/16-gcc5.4.0-mkl-cuda8.0', 'arpack-ng/3.5.0-intel-2017a', 'autoconf/2.69', 'bcl2fastq2/2.20.0-intel-2017b-Python-2.7.14', 'binutils/2.26', 'binutils/2.26-GCCcore-5.4.0', 'binutils/2.27', 'binutils/2.27-GCCcore-6.3.0', 'binutils/2.28', 'binutils/2.28-GCCcore-6.3.0', 'binutils/2.28-GCCcore-6.4.0', 'binutils/2.29', 'binutils/2.29-GCCcore-7.2.0', 'bzip2/1.0.6-GCC-5.4.0-2.26', 'bzip2/1.0.6-GCCcore-6.3.0', 'bzip2/1.0.6-GCCcore-6.4.0', 'bzip2/1.0.6-GCCcore-7.2.0', 'cURL/7.53.1-GCCcore-6.3.0', 'cURL/7.56.0-GCCcore-6.4.0', 'cURL/7.56.1-GCCcore-6.4.0', 'cairo/1.14.10-intel-2017b', 'cairo/1.14.8-intel-2017a', 'cns/1.3', 'cns/default', 'cuda/6.0', 'cuda/6.5', 'cuda/7.0', 'cuda/7.5', 'cuda/8.0', 'cuda/9.0', 'cudnn/5.1-8.0', 'deepTools/2.5.4-intel-2017b-Python-3.6.3', 'expat/2.2.0-GCCcore-6.3.0', 'expat/2.2.4-GCCcore-6.4.0', 'expat/2.2.5-GCCcore-6.4.0', 'fftw/3.3.5-gcc5.4.0', 'find_circ/1.2-20170228-intel-2017b-Python-2.7.14', 'flex/2.5.39-GCCcore-6.4.0', 'flex/2.6.0', 'flex/2.6.0-GCCcore-5.4.0', 'flex/2.6.3', 'flex/2.6.3-GCCcore-6.3.0', 'flex/2.6.4', 'flex/2.6.4-GCCcore-6.3.0', 'flex/2.6.4-GCCcore-6.4.0', 'flex/2.6.4-GCCcore-7.2.0', 'fontconfig/2.12.1-GCCcore-6.3.0-libpng-1.6.29', 'fontconfig/2.12.4-GCCcore-6.4.0', 'freeglut/3.0.0-intel-2017a', 'freeglut/3.0.0-intel-2017b', 'freetype/2.7.1-GCCcore-6.3.0-libpng-1.6.29', 'freetype/2.8-GCCcore-6.4.0', 'freetype/2.8.1-GCCcore-6.4.0', 'gcc/4.7.2-devtoolset-1.1', 'gcc/4.8.2-devtoolset-2', 'gcc/4.9.3', 'gcc/5.4.0', 'gcc/7.2.0', 'gettext/0.19.8', 'gettext/0.19.8.1', 'gettext/0.19.8.1-GCCcore-6.3.0', 'gettext/0.19.8.1-GCCcore-6.4.0', 'gflags/2.1.2-intel-2017a', 'gflags/2.2.1-intel-2017a', 'glog/0.3.4-intel-2017a', 'glog/0.3.5-intel-2017a', 'gnuplot/5.0.6-intel-2017a', 'gperf/3.0.4-intel-2017a', 'gperf/3.1-GCCcore-6.4.0', 'gperftools/2.6.3-GCCcore-6.4.0', 'gromacs/2016.4-gcc5.4.0-Anode', 'gromacs/5.1.4-gcc5.4.0', 'gromacs/5.1.4-gcc5.4.0-Anode', 'gromacs/module.gromacs.2016.4-gcc5.4.0-Anode', 'h5py/2.7.1-intel-2017b-Python-2.7.14', 'h5py/2.7.1-intel-2017b-Python-3.6.3', 'help2man/1.47.4', 'help2man/1.47.4-GCCcore-6.3.0', 'help2man/1.47.4-GCCcore-6.4.0', 'help2man/1.47.4-GCCcore-7.2.0', 'hwloc/1.11.8-GCCcore-6.4.0', 'hwloc/1.11.8-intel-2017a', 'icc/2017.1.132-GCC-6.3.0-2.27', 'icc/2017.4.196-GCC-6.4.0-2.28', 'iccifort/2017.1.132-GCC-6.3.0-2.27', 'iccifort/2017.4.196-GCC-6.4.0-2.28', 'ifort/2017.1.132-GCC-6.3.0-2.27', 'ifort/2017.4.196-GCC-6.4.0-2.28', 'iimpi/2017a', 'iimpi/2017b', 'imkl/2017.1.132-iimpi-2017a', 'imkl/2017.3.196-iimpi-2017b', 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27', 'impi/2017.3.196-iccifort-2017.4.196-GCC-6.4.0-2.28', 'intel/2017a', 'intel/2017b', 'intel/compiler/composer_xe_2013.5.192', 'intel/compiler/l_ics_2013.0.028', 'intel/mpi/4.1.0.024', 'intltool/0.51.0-GCCcore-6.3.0-Perl-5.24.1', 'intltool/0.51.0-GCCcore-6.4.0-Perl-5.26.0', 'iva/1.0.8', 'java/1.8.0_latest', 'libGLU/9.0.0-intel-2017a', 'libGLU/9.0.0-intel-2017b', 'libcerf/1.5-intel-2017a', 'libdrm/2.4.76-intel-2017a', 'libdrm/2.4.88-GCCcore-6.4.0', 'libffi/3.2.1-GCC-5.4.0-2.26', 'libffi/3.2.1-GCCcore-6.3.0', 'libffi/3.2.1-GCCcore-6.4.0', 'libgd/2.2.4-intel-2017a', 'libjpeg-turbo/1.5.1-intel-2017a', 'libjpeg-turbo/1.5.2-GCCcore-6.3.0', 'libjpeg-turbo/1.5.2-GCCcore-6.4.0', 'libpng/1.6.29-GCCcore-6.3.0', 'libpng/1.6.32-GCCcore-6.4.0', 'libreadline/6.3-GCC-5.4.0-2.26', 'libreadline/6.3-GCCcore-6.3.0', 'libreadline/7.0-GCCcore-6.3.0', 'libreadline/7.0-GCCcore-6.4.0', 'libreadline/7.0-GCCcore-7.2.0', 'libsndfile/1.0.28-GCCcore-6.4.0', 'libsndfile/1.0.28-intel-2017a', 'libtool/2.4.6-GCC-5.4.0-2.26', 'libtool/2.4.6-GCCcore-6.3.0', 'libtool/2.4.6-GCCcore-6.4.0', 'libtool/2.4.6-GCCcore-7.2.0', 'libunwind/1.2.1-GCCcore-6.4.0', 'libxc/3.0.0-intel-2017b', 'libxml2/2.9.4-GCC-5.4.0-2.26', 'libxml2/2.9.4-GCCcore-6.3.0', 'libxml2/2.9.4-GCCcore-6.4.0', 'libxml2/2.9.6-GCCcore-7.2.0', 'libxml2/2.9.7-GCCcore-6.4.0', 'libxslt/1.1.32-GCCcore-6.4.0', 'libyaml/0.1.7', 'libyaml/0.1.7-GCCcore-6.4.0', 'lxml/4.1.1-intel-2017b-Python-2.7.14', 'matlab/mcr-2012b', 'matlab/mcr-2013b', 'matlab/mcr-2014a', 'matlab/mcr-2015a', 'matplotlib/2.0.2-intel-2017a-Python-2.7.13-libpng-1.6.29', 'matplotlib/2.1.1-intel-2017b-Python-2.7.14', 'matplotlib/2.1.1-intel-2017b-Python-3.6.3', 'mkl-dnn/0.11-intel-2017b', 'mpich2/3.1/gcc/4.4.7', 'mvapich2/1.9/gcc/4.4.7', 'ncurses/6.0', 'ncurses/6.0-GCC-5.4.0-2.26', 'ncurses/6.0-GCCcore-6.3.0', 'ncurses/6.0-GCCcore-6.4.0', 'ncurses/6.0-GCCcore-7.2.0', 'nd2reader/3.0.6-intel-2017b-Python-2.7.14', 'netCDF/4.4.1.1-intel-2017a', 'netCDF/4.5.0-intel-2017b', 'nettle/3.3-GCCcore-6.4.0', 'nettle/3.3-intel-2017a', 'numactl/2.0.11-GCCcore-6.3.0', 'numactl/2.0.11-GCCcore-6.4.0', 'numexpr/2.6.4-intel-2017a-Python-3.6.1', 'openmpi/1.10.3', 'openmpi/1.10.3-gcc4.9.3', 'openmpi/1.10.3-gcc5.4.0', 'openmpi/1.6.5/gcc/4.4.7', 'parallel/20171122-intel-2017b', 'phono3py/1.12.5.35-intel-2017b-Python-2.7.14', 'phonopy/1.12.2.20-intel-2017b-Python-2.7.14', 'pixman/0.34.0-GCCcore-6.3.0', 'pixman/0.34.0-GCCcore-6.4.0', 'pkg-config/0.29.1-GCCcore-6.3.0', 'pkg-config/0.29.1-intel-2017a', 'pkg-config/0.29.2-GCCcore-6.4.0', 'pkg-config/0.29.2-intel-2017a', 'pkgconfig/1.2.2-intel-2017b-Python-2.7.14', 'pkgconfig/1.2.2-intel-2017b-Python-3.6.3', 'proovread/2.14.1-intel-2017b', 'protobuf-python/3.3.0-intel-2017a-Python-2.7.13', 'pyScaf/0.12a4-intel-2017b-Python-2.7.14', 'pybedtools/0.7.10-intel-2017b-Python-2.7.14', 'pypy/5.7.0', 'python/2.7', 'python/2.7.10', 'python/2.7.10-gcc4.9.3', 'python/2.7.10-gcc5.4.0', 'python/2.7.11', 'python/2.7.6', 'python/2.7.7-venv', 'python/2.7.7-venv-unicode', 'python/2.7.8', 'python/3.4.3', 'python/3.4.6-gcc4.8.2', 'python/3.4.7-gcc4.8.2', 'python/3.5.2-gcc5.4.0', 'qrupdate/1.1.2-intel-2017a', 'relion/1.2-gcc4.7.2', 'relion/1.3-3-gcc4.7.2', 'relion/1.3-beta3-gcc4.7.2', 'relion/1.3-compA-gcc4.7.2', 'relion/1.3-gcc4.7.2', 'relion/1.3-relax-1-gcc4.7.2', 'relion/1.3-relax-1.1-gcc4.7.2', 'relion/1.4-fftw-3.3.4-gcc4.7.2', 'relion/1.4-gcc4.7.2', 'relion/1.4-single-fftw-3.3.4-gcc4.7.2', 'relion/1.4-single-gcc4.7.2', 'relion/1.4.a-gcc4.7.2', 'relion/1.4.b-gcc4.7.2', 'relion/1.4b1-gcc4.7.2', 'relion/2.0.3-gcc4.9.3', 'relion/2.0b-20160622-gcc4.9.3', 'relion/2.0b-20160623-gcc4.9.3-cuda7.0', 'relion/2.0b-20161006-gcc4.9.3', 'relion/2.0b-20161006-gcc4.9.3-cuda7.5', 'relion/vlion-20160125-gcc4.7.2', 'relion/vlion-20160314-gcc4.7.2', 'relion/vlion-20160314-single-gcc4.7.2', 'scikit-image/0.13.0-intel-2017a-Python-2.7.13', 'scikit-image/0.13.1-intel-2017b-Python-2.7.14', 'segemehl/0.2.0-intel-2017b', 'snappy/1.1.6-intel-2017a', 'snappy/1.1.7-intel-2017a', 'tbb/2018_U1-GCCcore-6.4.0', 'torch/20170221-gcc5.4.0', 'torch/20170221-k80-gcc5.4.0', 'torch/20170221-p100-gcc5.4.0', 'torch/20170221-titan-gcc5.4.0', 'util-linux/2.29.2-intel-2017a', 'util-linux/2.31-GCCcore-6.4.0', 'worker/1.6.7-intel-2017a', 'worker/1.6.7-intel-2017b', 'x264/20171217-intel-2017b', 'x265/2.6-intel-2017b', 'xprop/1.2.2-intel-2017a', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-6.3.0', 'zlib/1.2.11-GCCcore-6.4.0', 'zlib/1.2.11-GCCcore-7.2.0', 'zlib/1.2.8', 'zlib/1.2.8-GCC-5.4.0-2.26', 'zlib/1.2.8-GCCcore-5.4.0']
== 2018-01-12 17:57:36,213 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: []
== 2018-01-12 17:57:36,213 easyblock.py:2452 INFO Running method make_builddir part of step ready
== 2018-01-12 17:57:36,213 easyblock.py:825 DEBUG Creating the build directory /dev/shm/FFTW/3.3.7/gompi-2018a (cleanup: True)
== 2018-01-12 17:57:36,214 filetools.py:1107 INFO Creating directory /dev/shm/FFTW/3.3.7/gompi-2018a (parents: True, set_gid: False, sticky: False)
== 2018-01-12 17:57:36,214 easyblock.py:2452 INFO Running method env_reset_changes part of step ready
== 2018-01-12 17:57:36,214 easyblock.py:2452 INFO Running method handle_iterate_opts part of step ready
== 2018-01-12 17:57:36,214 easyblock.py:1448 DEBUG Found list for configopts: ['--enable-single --enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads --enable-avx --enable-sse2 --enable-sse ', '--enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads --enable-avx --enable-sse2 ', '--enable-long-double --enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads ', '--enable-quad-precision --with-pic --enable-openmp --enable-shared --enable-threads ']
== 2018-01-12 17:57:36,214 easyblock.py:1451 INFO Current iteration index: 0
== 2018-01-12 17:57:36,215 easyblock.py:1459 DEBUG Next value for configopts: --enable-single --enable-mpi --with-pic --enable-openmp --enable-shared --enable-threads --enable-avx --enable-sse2 --enable-sse
== 2018-01-12 17:57:36,215 easyblock.py:2438 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False
== 2018-01-12 17:57:36,215 build_log.py:233 INFO unpacking...
== 2018-01-12 17:57:36,215 easyblock.py:2446 INFO Starting source step
== 2018-01-12 17:57:36,215 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,215 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,216 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,216 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,216 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,216 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,216 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,216 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,217 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,217 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,217 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,217 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,217 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,217 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,217 easyblock.py:2452 INFO Running method checksum_step part of step source
== 2018-01-12 17:57:36,218 filetools.py:652 DEBUG Using blocksize 16777216 for calculating the checksum
== 2018-01-12 17:57:36,241 filetools.py:700 DEBUG Computed sha256 checksum for /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz: 3b609b7feba5230e8f6dd8d245ddbefac324c5a6ae4186947670d9ac2cd25573 (correct checksum: 3b609b7feba5230e8f6dd8d245ddbefac324c5a6ae4186947670d9ac2cd25573)
== 2018-01-12 17:57:36,241 easyblock.py:1655 INFO Checksum verification for /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz using 3b609b7feba5230e8f6dd8d245ddbefac324c5a6ae4186947670d9ac2cd25573 passed.
== 2018-01-12 17:57:36,241 easyblock.py:2452 INFO Running method extract_step part of step source
== 2018-01-12 17:57:36,241 easyblock.py:1666 INFO Unpacking source fftw-3.3.7.tar.gz
== 2018-01-12 17:57:36,242 filetools.py:1135 DEBUG Not creating existing path /dev/shm/FFTW/3.3.7/gompi-2018a
== 2018-01-12 17:57:36,242 filetools.py:309 DEBUG Unpacking /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz in directory /dev/shm/FFTW/3.3.7/gompi-2018a.
== 2018-01-12 17:57:36,242 run.py:163 DEBUG run_cmd: running cmd tar xzf /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz (in /dev/shm/FFTW/3.3.7/gompi-2018a)
== 2018-01-12 17:57:36,242 run.py:183 INFO running cmd: tar xzf /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz
== 2018-01-12 17:57:36,386 run.py:488 DEBUG cmd "tar xzf /well/rescomp/eb/sources/f/FFTW/fftw-3.3.7.tar.gz" exited with exit code 0 and output:

== 2018-01-12 17:57:36,387 run.py:522 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2018-01-12 17:57:36,387 filetools.py:739 DEBUG Last dir list ['tools', 'doc', 'mpi', 'tests', 'threads', 'libbench2', 'api', 'reodft', 'rdft', 'dft', 'simd-support', 'depcomp', 'kernel', 'genfft', 'support', 'FFTW3ConfigVersion.cmake.in', 'FFTW3Config.cmake.in', 'cmake.config.h.in', 'CMakeLists.txt', 'CONVENTIONS', 'bootstrap.sh', 'COPYRIGHT', 'missing', 'ltmain.sh', 'install-sh', 'config.sub', 'config.guess', 'compile', 'TODO', 'README', 'NEWS', 'INSTALL', 'ChangeLog', 'COPYING', 'AUTHORS', 'fftw.pc.in', 'config.h.in', 'Makefile.in', 'aclocal.m4', 'configure.ac', 'configure', 'Makefile.am', 'm4']
== 2018-01-12 17:57:36,387 filetools.py:740 DEBUG Possible new dir /dev/shm/FFTW/3.3.7/gompi-2018a/fftw-3.3.7 found
== 2018-01-12 17:57:36,387 easyblock.py:2438 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False
== 2018-01-12 17:57:36,388 build_log.py:233 INFO patching...
== 2018-01-12 17:57:36,388 easyblock.py:2446 INFO Starting patch step
== 2018-01-12 17:57:36,388 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,388 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,388 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,388 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,389 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,389 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,389 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,390 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,390 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,390 easyblock.py:2452 INFO Running method patch_step part of step patch
== 2018-01-12 17:57:36,390 easyblock.py:2438 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2018-01-12 17:57:36,390 build_log.py:233 INFO preparing...
== 2018-01-12 17:57:36,390 easyblock.py:2446 INFO Starting prepare step
== 2018-01-12 17:57:36,390 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,390 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,391 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x7f6778d50b50>
== 2018-01-12 17:57:36,391 templates.py:175 DEBUG version found in easyconfig is 3.3.7
== 2018-01-12 17:57:36,391 templates.py:219 DEBUG name: github_account, config: None
== 2018-01-12 17:57:36,392 templates.py:219 DEBUG name: name, config: FFTW
== 2018-01-12 17:57:36,392 templates.py:219 DEBUG name: version, config: 3.3.7
== 2018-01-12 17:57:36,392 templates.py:219 DEBUG name: versionsuffix, config:
== 2018-01-12 17:57:36,392 templates.py:219 DEBUG name: versionprefix, config:
== 2018-01-12 17:57:36,392 easyblock.py:2452 INFO Running method prepare_step part of step prepare
== 2018-01-12 17:57:36,392 modules.py:542 DEBUG Found cached result for 'module show gompi/2018a' with key '('MODULEPATH=/well/rescomp/eb/modules/all:/gpfs0/mgmt/modules/Modules/$MODULE_VERSION/modulefiles:/gpfs0/mgmt/modules/Modules/modulefiles:/mgmt/modules/eb/modules/all:/users/rescomp/adamh/.local/easybuild/modules/all', 'modulecmd', 'gompi/2018a')': ModuleCmd_Display.c(151):ERROR:105: Unable to locate a modulefile for 'gompi/2018a'


== 2018-01-12 17:57:36,412 build_log.py:158 ERROR EasyBuild crashed with an error (at ?:124 in __init__): No module found for toolchain: gompi/2018a (at easybuild/tools/toolchain/toolchain.py:568 in _load_modules)
== 2018-01-12 17:57:36,413 easyblock.py:2685 WARNING build failed (first 300 chars): No module found for toolchain: gompi/2018a
== 2018-01-12 17:57:36,413 easyblock.py:279 INFO Closing log for application name FFTW version 3.3.7